Protein–RNA interactions for Protein: P26022

PTX3, Pentraxin-related protein PTX3, humanhuman

Predicted RBP Predictions only

Length 381 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PTX3P26022 SGIP1-206ENST00000435165 3646 ntAPPRIS ALT2 TSL 2 BASIC3.82□□□□□ -1.8
PTX3P26022 LRRTM4-201ENST00000409088 3616 ntTSL 1 (best) BASIC3.82□□□□□ -1.8
PTX3P26022 SEC31A-215ENST00000505472 4159 ntTSL 5 BASIC3.81□□□□□ -1.8
PTX3P26022 DMXL1-201ENST00000311085 11072 ntAPPRIS P1 TSL 1 (best) BASIC3.81□□□□□ -1.8
PTX3P26022 LIPI-203ENST00000536861 1529 ntAPPRIS ALT2 TSL 1 (best) BASIC3.81□□□□□ -1.8
PTX3P26022 AC002546.1-201ENST00000588041 2504 ntBASIC3.81□□□□□ -1.8
PTX3P26022 R3HDM1-220ENST00000628915 4325 ntTSL 5 BASIC3.81□□□□□ -1.8
PTX3P26022 ABCD2-201ENST00000308666 6238 ntAPPRIS P1 TSL 1 (best) BASIC3.81□□□□□ -1.8
PTX3P26022 FZD3-201ENST00000240093 13736 ntAPPRIS P1 TSL 1 (best) BASIC3.81□□□□□ -1.8
PTX3P26022 USP9Y-201ENST00000338981 10036 ntAPPRIS P1 TSL 1 (best) BASIC3.81□□□□□ -1.8
PTX3P26022 ZGRF1-212ENST00000612287 2176 ntTSL 1 (best) BASIC3.81□□□□□ -1.8
PTX3P26022 RPL26-201ENST00000293842 524 ntAPPRIS P1 TSL 1 (best) BASIC3.81□□□□□ -1.8
PTX3P26022 COMMD6-201ENST00000355801 486 ntTSL 2 BASIC3.81□□□□□ -1.8
PTX3P26022 Y_RNA.148-201ENST00000363557 117 ntBASIC3.81□□□□□ -1.8
PTX3P26022 RPL26P27-201ENST00000414397 437 ntBASIC3.81□□□□□ -1.8
PTX3P26022 AL117339.3-201ENST00000418733 162 ntBASIC3.81□□□□□ -1.8
PTX3P26022 YPEL5P1-201ENST00000419731 367 ntBASIC3.81□□□□□ -1.8
PTX3P26022 RPL23AP50-201ENST00000434149 455 ntBASIC3.81□□□□□ -1.8
PTX3P26022 AL445490.2-201ENST00000440492 441 ntTSL 3 BASIC3.81□□□□□ -1.8
PTX3P26022 GAS5-221ENST00000450589 632 ntTSL 1 (best) BASIC3.81□□□□□ -1.8
PTX3P26022 DCLRE1CP1-201ENST00000454630 470 ntBASIC3.81□□□□□ -1.8
PTX3P26022 HMGN2P16-201ENST00000456802 261 ntBASIC3.81□□□□□ -1.8
PTX3P26022 AL138787.2-202ENST00000479395 385 ntTSL 2 BASIC3.81□□□□□ -1.8
PTX3P26022 LINC02122-201ENST00000511395 577 ntTSL 4 BASIC3.81□□□□□ -1.8
PTX3P26022 PTP4A1P4-201ENST00000512479 322 ntBASIC3.81□□□□□ -1.8
PTX3P26022 RNA5SP309-201ENST00000516670 106 ntBASIC3.81□□□□□ -1.8
PTX3P26022 AC087749.1-202ENST00000585020 566 ntTSL 2 BASIC3.81□□□□□ -1.8
PTX3P26022 AC003973.1-201ENST00000600071 546 ntTSL 4 BASIC3.81□□□□□ -1.8
PTX3P26022 AC004852.3-201ENST00000614131 326 ntBASIC3.81□□□□□ -1.8
PTX3P26022 FP236240.3-201ENST00000623061 327 ntBASIC3.81□□□□□ -1.8
PTX3P26022 AC112484.5-201ENST00000624189 228 ntBASIC3.81□□□□□ -1.8
PTX3P26022 AL109837.2-201ENST00000632608 295 ntTSL 3 BASIC3.81□□□□□ -1.8
PTX3P26022 U6.99-201ENST00000637524 83 ntBASIC3.81□□□□□ -1.8
PTX3P26022 BIRC3-201ENST00000263464 5197 ntAPPRIS P1 TSL 1 (best) BASIC3.81□□□□□ -1.8
PTX3P26022 CDH10-201ENST00000264463 3438 ntAPPRIS P1 TSL 1 (best) BASIC3.81□□□□□ -1.8
PTX3P26022 RNF111-206ENST00000559209 5278 ntTSL 1 (best) BASIC3.81□□□□□ -1.8
PTX3P26022 CUL1P1-201ENST00000509510 2425 ntBASIC3.81□□□□□ -1.8
PTX3P26022 FGF7-202ENST00000560270 1688 ntTSL 1 (best) BASIC3.81□□□□□ -1.8
PTX3P26022 AL133383.2-201ENST00000622958 2336 ntBASIC3.81□□□□□ -1.8
PTX3P26022 LGI1-210ENST00000629035 2251 ntTSL 5 BASIC3.81□□□□□ -1.8
PTX3P26022 TRMT10A-203ENST00000394877 3516 ntAPPRIS P1 TSL 2 BASIC3.81□□□□□ -1.8
PTX3P26022 LIG4-201ENST00000356922 4096 ntAPPRIS P1 TSL 1 (best) BASIC3.8□□□□□ -1.8
PTX3P26022 SRP72P2-201ENST00000344851 1979 ntBASIC3.8□□□□□ -1.8
PTX3P26022 CEP170-202ENST00000366542 6828 ntAPPRIS P1 TSL 5 BASIC3.8□□□□□ -1.8
PTX3P26022 CYLC2-204ENST00000612124 1817 ntAPPRIS P1 TSL 1 (best) BASIC3.8□□□□□ -1.8
PTX3P26022 RPL9P7-201ENST00000330965 580 ntBASIC3.8□□□□□ -1.8
PTX3P26022 RNA5SP130-201ENST00000364431 114 ntBASIC3.8□□□□□ -1.8
PTX3P26022 RNU1-115P-201ENST00000365329 160 ntBASIC3.8□□□□□ -1.8
PTX3P26022 RNU6-827P-201ENST00000365553 106 ntBASIC3.8□□□□□ -1.8
PTX3P26022 Y_RNA.428-201ENST00000384078 102 ntBASIC3.8□□□□□ -1.8
PTX3P26022 SNORA70C-201ENST00000384538 135 ntBASIC3.8□□□□□ -1.8
PTX3P26022 RPL21P17-201ENST00000397467 475 ntBASIC3.8□□□□□ -1.8
PTX3P26022 MIR888-201ENST00000401186 77 ntBASIC3.8□□□□□ -1.8
PTX3P26022 AL513475.1-201ENST00000406602 315 ntBASIC3.8□□□□□ -1.8
PTX3P26022 RPL17P36-201ENST00000420302 549 ntBASIC3.8□□□□□ -1.8
PTX3P26022 AL356010.2-201ENST00000422844 197 ntTSL 3 BASIC3.8□□□□□ -1.8
PTX3P26022 SIRPG-AS1-201ENST00000437384 410 ntTSL 3 BASIC3.8□□□□□ -1.8
PTX3P26022 AL513043.1-201ENST00000439124 535 ntBASIC3.8□□□□□ -1.8
PTX3P26022 AC091153.2-202ENST00000441700 384 ntTSL 3 BASIC3.8□□□□□ -1.8
PTX3P26022 RPL9P9-202ENST00000466501 579 ntBASIC3.8□□□□□ -1.8
PTX3P26022 AC068781.1-201ENST00000488231 618 ntBASIC3.8□□□□□ -1.8
PTX3P26022 ENSA-210ENST00000503241 574 ntTSL 3 BASIC3.8□□□□□ -1.8
PTX3P26022 AC114801.2-201ENST00000503825 781 ntBASIC3.8□□□□□ -1.8
PTX3P26022 AC022493.2-201ENST00000506122 481 ntBASIC3.8□□□□□ -1.8
PTX3P26022 AC026726.1-201ENST00000512859 601 ntBASIC3.8□□□□□ -1.8
PTX3P26022 RNU6-1231P-201ENST00000517185 103 ntBASIC3.8□□□□□ -1.8
PTX3P26022 AC023866.1-201ENST00000518064 579 ntTSL 4 BASIC3.8□□□□□ -1.8
PTX3P26022 AC007991.1-201ENST00000522680 631 ntBASIC3.8□□□□□ -1.8
PTX3P26022 AP002884.4-201ENST00000527589 594 ntTSL 3 BASIC3.8□□□□□ -1.8
PTX3P26022 AP002004.1-207ENST00000531371 526 ntTSL 1 (best) BASIC3.8□□□□□ -1.8
PTX3P26022 AC073655.2-202ENST00000547927 401 ntTSL 3 BASIC3.8□□□□□ -1.8
PTX3P26022 HMGB1P14-201ENST00000557424 591 ntBASIC3.8□□□□□ -1.8
PTX3P26022 SUB1P3-201ENST00000564581 315 ntBASIC3.8□□□□□ -1.8
PTX3P26022 ZNF616-202ENST00000596290 568 ntTSL 4 BASIC3.8□□□□□ -1.8
PTX3P26022 AC008737.2-201ENST00000599446 118 ntBASIC3.8□□□□□ -1.8
PTX3P26022 AC136443.5-201ENST00000603741 370 ntBASIC3.8□□□□□ -1.8
PTX3P26022 AP001836.1-201ENST00000604675 523 ntBASIC3.8□□□□□ -1.8
PTX3P26022 MIR6748-201ENST00000610433 71 ntBASIC3.8□□□□□ -1.8
PTX3P26022 AC091925.1-201ENST00000623204 462 ntBASIC3.8□□□□□ -1.8
PTX3P26022 AL353746.1-201ENST00000566293 6881 ntBASIC3.8□□□□□ -1.8
PTX3P26022 DTHD1-202ENST00000456874 3365 ntAPPRIS P1 TSL 1 (best) BASIC3.8□□□□□ -1.8
PTX3P26022 ADGRG2-205ENST00000357991 4661 ntAPPRIS P3 TSL 1 (best) BASIC3.8□□□□□ -1.8
PTX3P26022 RGS22-214ENST00000523287 4033 ntAPPRIS ALT2 TSL 2 BASIC3.79□□□□□ -1.8
PTX3P26022 CAPS2-206ENST00000409799 1859 ntTSL 1 (best) BASIC3.79□□□□□ -1.8
PTX3P26022 ERBIN-203ENST00000380938 4701 ntTSL 2 BASIC3.79□□□□□ -1.8
PTX3P26022 ADGRL2-211ENST00000370730 6173 ntTSL 5 BASIC3.79□□□□□ -1.8
PTX3P26022 IQGAP2-202ENST00000379730 5442 ntTSL 5 BASIC3.79□□□□□ -1.8
PTX3P26022 MUC7-201ENST00000304887 2443 ntAPPRIS P2 TSL 1 (best) BASIC3.79□□□□□ -1.8
PTX3P26022 AC018462.1-201ENST00000425966 1684 ntTSL 1 (best) BASIC3.79□□□□□ -1.8
PTX3P26022 AC126755.2-208ENST00000327792 462 ntBASIC3.79□□□□□ -1.8
PTX3P26022 AC138969.1-213ENST00000331436 462 ntBASIC3.79□□□□□ -1.8
PTX3P26022 RNU6-778P-201ENST00000363269 103 ntBASIC3.79□□□□□ -1.8
PTX3P26022 Y_RNA.158-201ENST00000363651 101 ntBASIC3.79□□□□□ -1.8
PTX3P26022 U8.8-201ENST00000365399 135 ntBASIC3.79□□□□□ -1.8
PTX3P26022 SNORA62-201ENST00000365493 153 ntBASIC3.79□□□□□ -1.8
PTX3P26022 CRP-203ENST00000368111 512 ntTSL 3 BASIC3.79□□□□□ -1.8
PTX3P26022 AL591034.2-201ENST00000402839 359 ntBASIC3.79□□□□□ -1.8
PTX3P26022 RNU4-6P-201ENST00000410804 122 ntBASIC3.79□□□□□ -1.8
PTX3P26022 AL592435.1-201ENST00000416401 469 ntTSL 3 BASIC3.79□□□□□ -1.8
PTX3P26022 HMGN2P30-201ENST00000423237 256 ntBASIC3.79□□□□□ -1.8
Retrieved 100 of 98,524 protein–RNA pairs in 96.9 ms