Protein–RNA interactions for Protein: P25054

APC, Adenomatous polyposis coli protein, humanhuman

Predictions only

Length 2,843 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
APCP25054 MTND4LP3-201ENST00000468320 276 ntBASIC0.64□□□□□ -2.31
APCP25054 RPS27P21-201ENST00000486977 252 ntBASIC0.64□□□□□ -2.31
APCP25054 AC010387.1-201ENST00000507526 487 ntTSL 2 BASIC0.64□□□□□ -2.31
APCP25054 RNY4P37-201ENST00000516225 96 ntBASIC0.64□□□□□ -2.31
APCP25054 LINC02309-201ENST00000553679 207 ntTSL 3 BASIC0.64□□□□□ -2.31
APCP25054 AL356804.1-201ENST00000553791 448 ntTSL 5 BASIC0.64□□□□□ -2.31
APCP25054 AC009145.1-201ENST00000563230 433 ntTSL 3 BASIC0.64□□□□□ -2.31
APCP25054 AC023824.3-201ENST00000569003 562 ntBASIC0.64□□□□□ -2.31
APCP25054 MIR4698-201ENST00000577795 80 ntBASIC0.64□□□□□ -2.31
APCP25054 FAM60BP-201ENST00000578364 658 ntBASIC0.64□□□□□ -2.31
APCP25054 ABBA01006766.1-201ENST00000584728 294 ntBASIC0.64□□□□□ -2.31
APCP25054 LINC01515-204ENST00000595269 402 ntTSL 5 BASIC0.64□□□□□ -2.31
APCP25054 AC008749.1-201ENST00000597650 306 ntBASIC0.64□□□□□ -2.31
APCP25054 AC012467.1-201ENST00000607740 256 ntBASIC0.64□□□□□ -2.31
APCP25054 RNU6-91P-201ENST00000607774 107 ntBASIC0.64□□□□□ -2.31
APCP25054 AC083798.2-205ENST00000608015 575 ntTSL 5 BASIC0.64□□□□□ -2.31
APCP25054 AC004067.1-201ENST00000608733 700 ntBASIC0.64□□□□□ -2.31
APCP25054 CCT4P2-201ENST00000233836 1548 ntBASIC0.63□□□□□ -2.31
APCP25054 GTPBP8-205ENST00000473129 1518 ntTSL 2 BASIC0.63□□□□□ -2.31
APCP25054 AL138713.1-201ENST00000624026 2130 ntBASIC0.63□□□□□ -2.31
APCP25054 CCDC68-202ENST00000432185 4014 ntAPPRIS P1 TSL 1 (best) BASIC0.63□□□□□ -2.31
APCP25054 AC016716.1-201ENST00000265882 708 ntBASIC0.63□□□□□ -2.31
APCP25054 RNU5A-1-201ENST00000362698 116 ntBASIC0.63□□□□□ -2.31
APCP25054 RNU6-884P-201ENST00000363889 107 ntBASIC0.63□□□□□ -2.31
APCP25054 SNORA23-201ENST00000365128 182 ntBASIC0.63□□□□□ -2.31
APCP25054 RNU6-741P-201ENST00000383889 107 ntBASIC0.63□□□□□ -2.31
APCP25054 Y_RNA.472-201ENST00000384322 102 ntBASIC0.63□□□□□ -2.31
APCP25054 AL356421.1-201ENST00000403255 413 ntBASIC0.63□□□□□ -2.31
APCP25054 AC096649.2-201ENST00000416186 393 ntBASIC0.63□□□□□ -2.31
APCP25054 ATP6V0E1P3-201ENST00000420036 246 ntBASIC0.63□□□□□ -2.31
APCP25054 AL109913.1-201ENST00000421173 514 ntBASIC0.63□□□□□ -2.31
APCP25054 ZNF736P7Y-201ENST00000425158 820 ntBASIC0.63□□□□□ -2.31
APCP25054 AL451060.1-203ENST00000431307 362 ntTSL 3 BASIC0.63□□□□□ -2.31
APCP25054 AP002512.3-201ENST00000440231 985 ntAPPRIS P1 BASIC0.63□□□□□ -2.31
APCP25054 AC005094.1-201ENST00000440420 368 ntBASIC0.63□□□□□ -2.31
APCP25054 RPS15AP27-201ENST00000449183 343 ntBASIC0.63□□□□□ -2.31
APCP25054 RNU6-775P-201ENST00000459318 96 ntBASIC0.63□□□□□ -2.31
APCP25054 HMGN1P10-201ENST00000474557 553 ntBASIC0.63□□□□□ -2.31
APCP25054 RBM43P1-201ENST00000476891 1081 ntBASIC0.63□□□□□ -2.31
APCP25054 AC018437.1-201ENST00000492214 406 ntBASIC0.63□□□□□ -2.31
APCP25054 RNU6-1183P-201ENST00000517054 60 ntBASIC0.63□□□□□ -2.31
APCP25054 SCARNA1-201ENST00000517138 166 ntBASIC0.63□□□□□ -2.31
APCP25054 MIR3117-201ENST00000584034 78 ntBASIC0.63□□□□□ -2.31
APCP25054 AC133794.1-201ENST00000602731 914 ntBASIC0.63□□□□□ -2.31
APCP25054 AL021997.1-201ENST00000605757 193 ntBASIC0.63□□□□□ -2.31
APCP25054 AL671511.2-201ENST00000611838 659 ntTSL 2 BASIC0.63□□□□□ -2.31
APCP25054 AL589743.7-201ENST00000612637 233 ntBASIC0.63□□□□□ -2.31
APCP25054 IGSF11-AS1-201ENST00000477009 1604 ntTSL 2 BASIC0.63□□□□□ -2.31
APCP25054 HTN3-201ENST00000381057 493 ntAPPRIS ALT2 TSL 2 BASIC0.63□□□□□ -2.31
APCP25054 RNU6-48P-201ENST00000384161 107 ntBASIC0.63□□□□□ -2.31
APCP25054 AP003170.3-201ENST00000399123 158 ntTSL 5 BASIC0.63□□□□□ -2.31
APCP25054 AL161449.1-201ENST00000414531 1199 ntBASIC0.63□□□□□ -2.31
APCP25054 AC098614.2-201ENST00000426040 255 ntBASIC0.63□□□□□ -2.31
APCP25054 ZNF863P-201ENST00000426746 417 ntBASIC0.63□□□□□ -2.31
APCP25054 SSXP4-201ENST00000451349 245 ntBASIC0.63□□□□□ -2.31
APCP25054 ANKRD36B-207ENST00000497329 649 ntTSL 1 (best) BASIC0.63□□□□□ -2.31
APCP25054 OR5BM1P-201ENST00000512021 366 ntBASIC0.63□□□□□ -2.31
APCP25054 AC027338.1-201ENST00000514840 825 ntBASIC0.63□□□□□ -2.31
APCP25054 NARSP2-202ENST00000522022 349 ntTSL 3 BASIC0.63□□□□□ -2.31
APCP25054 AP003049.1-201ENST00000529418 457 ntBASIC0.63□□□□□ -2.31
APCP25054 AC090616.3-201ENST00000582184 217 ntBASIC0.63□□□□□ -2.31
APCP25054 XIAPP1-201ENST00000603162 600 ntBASIC0.63□□□□□ -2.31
APCP25054 AC012669.1-201ENST00000603209 283 ntBASIC0.63□□□□□ -2.31
APCP25054 AP001330.4-201ENST00000604350 154 ntBASIC0.63□□□□□ -2.31
APCP25054 AC079791.1-201ENST00000605356 973 ntBASIC0.63□□□□□ -2.31
APCP25054 AC007349.4-201ENST00000608114 532 ntBASIC0.63□□□□□ -2.31
APCP25054 AC008555.8-201ENST00000623602 2168 ntBASIC0.63□□□□□ -2.31
APCP25054 PARPBP-203ENST00000392911 1916 ntTSL 5 BASIC0.62□□□□□ -2.31
APCP25054 ELL2P3-201ENST00000457883 1602 ntBASIC0.62□□□□□ -2.31
APCP25054 Y_RNA.132-201ENST00000363421 102 ntBASIC0.62□□□□□ -2.31
APCP25054 RNU6-1180P-201ENST00000364935 107 ntBASIC0.62□□□□□ -2.31
APCP25054 RNY3-201ENST00000365484 102 ntBASIC0.62□□□□□ -2.31
APCP25054 MIR16-1-201ENST00000385271 89 ntBASIC0.62□□□□□ -2.31
APCP25054 RNU6-220P-201ENST00000390919 107 ntBASIC0.62□□□□□ -2.31
APCP25054 RNU4-78P-201ENST00000410940 126 ntBASIC0.62□□□□□ -2.31
APCP25054 EDDM3CP-201ENST00000415977 425 ntBASIC0.62□□□□□ -2.31
APCP25054 BPY2DP-201ENST00000422208 265 ntBASIC0.62□□□□□ -2.31
APCP25054 MIR4435-2HG-206ENST00000432818 572 ntTSL 5 BASIC0.62□□□□□ -2.31
APCP25054 TRBV25OR9-2-201ENST00000438417 374 ntBASIC0.62□□□□□ -2.31
APCP25054 RPS20P10-201ENST00000451209 253 ntBASIC0.62□□□□□ -2.31
APCP25054 AL353691.1-201ENST00000451332 387 ntBASIC0.62□□□□□ -2.31
APCP25054 snoU13.28-201ENST00000459235 104 ntBASIC0.62□□□□□ -2.31
APCP25054 AC117503.1-201ENST00000472241 394 ntBASIC0.62□□□□□ -2.31
APCP25054 AC008243.1-202ENST00000506527 481 ntTSL 5 BASIC0.62□□□□□ -2.31
APCP25054 RNU6-416P-201ENST00000516265 103 ntBASIC0.62□□□□□ -2.31
APCP25054 AC114550.2-201ENST00000524008 397 ntTSL 3 BASIC0.62□□□□□ -2.31
APCP25054 SNHG1-210ENST00000539303 240 ntTSL 3 BASIC0.62□□□□□ -2.31
APCP25054 MGST1-215ENST00000540056 546 ntTSL 3 BASIC0.62□□□□□ -2.31
APCP25054 AL355773.1-201ENST00000554458 459 ntTSL 3 BASIC0.62□□□□□ -2.31
APCP25054 AC004160.1-210ENST00000599875 689 ntTSL 5 BASIC0.62□□□□□ -2.31
APCP25054 AC073968.1-201ENST00000618594 637 ntBASIC0.62□□□□□ -2.31
APCP25054 AP006248.3-201ENST00000623580 594 ntBASIC0.62□□□□□ -2.31
APCP25054 LRIF1-203ENST00000494675 1912 ntAPPRIS ALT2 TSL 2 BASIC0.62□□□□□ -2.31
APCP25054 OR4G2P-201ENST00000328113 903 ntBASIC0.62□□□□□ -2.31
APCP25054 RNU1-72P-201ENST00000362976 153 ntBASIC0.62□□□□□ -2.31
APCP25054 RNU6-942P-201ENST00000363002 107 ntBASIC0.62□□□□□ -2.31
APCP25054 RNU6-1066P-201ENST00000363573 105 ntBASIC0.62□□□□□ -2.31
APCP25054 RNU6-432P-201ENST00000384196 109 ntBASIC0.62□□□□□ -2.31
APCP25054 SNORD65.1-201ENST00000390889 71 ntBASIC0.62□□□□□ -2.31
APCP25054 MIR1290-201ENST00000408735 78 ntBASIC0.62□□□□□ -2.31
Retrieved 100 of 98,524 protein–RNA pairs in 119.3 ms