Protein–RNA interactions for Protein: P11387

TOP1, DNA topoisomerase 1, humanhuman

Known RBP Predictions only

Length 765 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TOP1P11387 DEFB130B-201ENST00000437818 240 ntAPPRIS P1 TSL 1 (best) BASIC2.4□□□□□ -2.03
TOP1P11387 AC016691.1-201ENST00000441321 413 ntBASIC2.4□□□□□ -2.03
TOP1P11387 RGS5-217ENST00000451759 835 ntTSL 3 BASIC2.4□□□□□ -2.03
TOP1P11387 KLF3P2-201ENST00000465138 268 ntBASIC2.4□□□□□ -2.03
TOP1P11387 AC026801.1-201ENST00000497178 464 ntBASIC2.4□□□□□ -2.03
TOP1P11387 AC093766.1-202ENST00000513400 718 ntTSL 3 BASIC2.4□□□□□ -2.03
TOP1P11387 OCIAD1-AS1-201ENST00000513576 265 ntTSL 3 BASIC2.4□□□□□ -2.03
TOP1P11387 RNU6-927P-201ENST00000516199 100 ntBASIC2.4□□□□□ -2.03
TOP1P11387 MIR892C-201ENST00000516410 77 ntBASIC2.4□□□□□ -2.03
TOP1P11387 AC023866.1-201ENST00000518064 579 ntTSL 4 BASIC2.4□□□□□ -2.03
TOP1P11387 AC106038.2-201ENST00000520706 568 ntBASIC2.4□□□□□ -2.03
TOP1P11387 AC120042.2-201ENST00000521556 667 ntTSL 2 BASIC2.4□□□□□ -2.03
TOP1P11387 C14orf105-204ENST00000526336 598 ntTSL 4 BASIC2.4□□□□□ -2.03
TOP1P11387 AP004247.1-201ENST00000531556 1289 ntBASIC2.4□□□□□ -2.03
TOP1P11387 AL356057.1-201ENST00000533798 831 ntBASIC2.4□□□□□ -2.03
TOP1P11387 AL133166.1-201ENST00000551040 1034 ntTSL 4 BASIC2.4□□□□□ -2.03
TOP1P11387 LINC01735-201ENST00000568112 279 ntTSL 3 BASIC2.4□□□□□ -2.03
TOP1P11387 AC024619.4-201ENST00000580924 316 ntBASIC2.4□□□□□ -2.03
TOP1P11387 AP001004.1-201ENST00000582468 324 ntBASIC2.4□□□□□ -2.03
TOP1P11387 FBXW7-AS1-201ENST00000605147 372 ntTSL 1 (best) BASIC2.4□□□□□ -2.03
TOP1P11387 AC097065.2-201ENST00000608159 533 ntBASIC2.4□□□□□ -2.03
TOP1P11387 DLEU1_2.1-201ENST00000617920 342 ntBASIC2.4□□□□□ -2.03
TOP1P11387 AC025048.6-202ENST00000627667 438 ntBASIC2.4□□□□□ -2.03
TOP1P11387 SEPT14P19-202ENST00000632397 370 ntTSL 3 BASIC2.4□□□□□ -2.03
TOP1P11387 SNX10-209ENST00000619420 2361 ntAPPRIS ALT1 TSL 5 BASIC2.4□□□□□ -2.03
TOP1P11387 ZNF355P-201ENST00000427301 3216 ntBASIC2.4□□□□□ -2.03
TOP1P11387 ESF1-202ENST00000617257 1470 ntTSL 5 BASIC2.39□□□□□ -2.03
TOP1P11387 ZBED5-201ENST00000413761 2512 ntAPPRIS P1 TSL 1 (best) BASIC2.39□□□□□ -2.03
TOP1P11387 PICALM-209ENST00000528398 2049 ntTSL 2 BASIC2.39□□□□□ -2.03
TOP1P11387 IDE-201ENST00000265986 5877 ntAPPRIS P1 TSL 1 (best) BASIC2.39□□□□□ -2.03
TOP1P11387 AC092447.10-201ENST00000620607 1652 ntBASIC2.39□□□□□ -2.03
TOP1P11387 HMGB1-201ENST00000326004 821 ntTSL 3 BASIC2.39□□□□□ -2.03
TOP1P11387 SPAG11A-202ENST00000326625 445 ntTSL 5 BASIC2.39□□□□□ -2.03
TOP1P11387 RNU4-21P-201ENST00000362802 126 ntBASIC2.39□□□□□ -2.03
TOP1P11387 RNU4-40P-201ENST00000364351 143 ntBASIC2.39□□□□□ -2.03
TOP1P11387 RNU6-432P-201ENST00000384196 109 ntBASIC2.39□□□□□ -2.03
TOP1P11387 GSTA9P-201ENST00000406231 611 ntBASIC2.39□□□□□ -2.03
TOP1P11387 MIR1305-201ENST00000408300 86 ntBASIC2.39□□□□□ -2.03
TOP1P11387 MIR1302-8-201ENST00000408342 128 ntBASIC2.39□□□□□ -2.03
TOP1P11387 MIR320C1-201ENST00000408566 88 ntBASIC2.39□□□□□ -2.03
TOP1P11387 LINC02331-201ENST00000418927 602 ntTSL 5 BASIC2.39□□□□□ -2.03
TOP1P11387 SKA2P1-201ENST00000425592 390 ntBASIC2.39□□□□□ -2.03
TOP1P11387 INTS6L-AS1-201ENST00000430820 398 ntTSL 3 BASIC2.39□□□□□ -2.03
TOP1P11387 AL365184.2-201ENST00000431139 435 ntBASIC2.39□□□□□ -2.03
TOP1P11387 ZNF385D-AS2-201ENST00000436306 424 ntTSL 5 BASIC2.39□□□□□ -2.03
TOP1P11387 AL590399.3-201ENST00000438072 543 ntTSL 5 BASIC2.39□□□□□ -2.03
TOP1P11387 AC124916.1-201ENST00000444020 547 ntBASIC2.39□□□□□ -2.03
TOP1P11387 MTND2P4-201ENST00000445034 1004 ntBASIC2.39□□□□□ -2.03
TOP1P11387 GDI2P2-201ENST00000445131 608 ntBASIC2.39□□□□□ -2.03
TOP1P11387 RPL23AP7-203ENST00000449021 469 ntBASIC2.39□□□□□ -2.03
TOP1P11387 LINC01474-202ENST00000449235 628 ntTSL 3 BASIC2.39□□□□□ -2.03
TOP1P11387 AL021397.1-201ENST00000451806 248 ntBASIC2.39□□□□□ -2.03
TOP1P11387 AL122001.1-201ENST00000457027 370 ntBASIC2.39□□□□□ -2.03
TOP1P11387 UBL5P3-201ENST00000475112 231 ntBASIC2.39□□□□□ -2.03
TOP1P11387 RPL38P4-201ENST00000502376 214 ntBASIC2.39□□□□□ -2.03
TOP1P11387 AC097467.3-213ENST00000508191 726 ntTSL 3 BASIC2.39□□□□□ -2.03
TOP1P11387 AC117522.2-201ENST00000510049 657 ntBASIC2.39□□□□□ -2.03
TOP1P11387 VCAN-AS1-201ENST00000512090 424 ntTSL 3 BASIC2.39□□□□□ -2.03
TOP1P11387 LINC02500-201ENST00000512547 493 ntTSL 3 BASIC2.39□□□□□ -2.03
TOP1P11387 AC108471.2-204ENST00000526807 784 ntTSL 5 BASIC2.39□□□□□ -2.03
TOP1P11387 AC013828.2-201ENST00000532487 235 ntBASIC2.39□□□□□ -2.03
TOP1P11387 AC093012.1-201ENST00000552999 446 ntTSL 3 BASIC2.39□□□□□ -2.03
TOP1P11387 AC087463.2-201ENST00000565943 472 ntTSL 3 BASIC2.39□□□□□ -2.03
TOP1P11387 AC091489.2-201ENST00000566263 604 ntBASIC2.39□□□□□ -2.03
TOP1P11387 MIR4307-201ENST00000582802 84 ntBASIC2.39□□□□□ -2.03
TOP1P11387 AF038458.1-201ENST00000588406 262 ntBASIC2.39□□□□□ -2.03
TOP1P11387 AC098848.1-201ENST00000588466 567 ntTSL 4 BASIC2.39□□□□□ -2.03
TOP1P11387 AL022161.1-201ENST00000604390 213 ntBASIC2.39□□□□□ -2.03
TOP1P11387 uc_338.14-201ENST00000613162 166 ntBASIC2.39□□□□□ -2.03
TOP1P11387 Y_RNA.783-201ENST00000613546 102 ntBASIC2.39□□□□□ -2.03
TOP1P11387 AC048344.4-201ENST00000619744 527 ntBASIC2.39□□□□□ -2.03
TOP1P11387 AC091931.1-201ENST00000623488 728 ntBASIC2.39□□□□□ -2.03
TOP1P11387 CCDC30-201ENST00000340612 2664 ntAPPRIS P2 TSL 5 BASIC2.39□□□□□ -2.03
TOP1P11387 OR5M1-202ENST00000641076 4302 ntAPPRIS P1 BASIC2.38□□□□□ -2.03
TOP1P11387 OXR1-209ENST00000517566 4501 ntTSL 1 (best) BASIC2.38□□□□□ -2.03
TOP1P11387 AL596028.1-201ENST00000326971 197 ntBASIC2.38□□□□□ -2.03
TOP1P11387 RNA5SP125-201ENST00000364843 120 ntBASIC2.38□□□□□ -2.03
TOP1P11387 HMGB3P2-201ENST00000411913 584 ntBASIC2.38□□□□□ -2.03
TOP1P11387 AC013401.1-202ENST00000422017 626 ntTSL 2 BASIC2.38□□□□□ -2.03
TOP1P11387 RPS3AP44-201ENST00000425466 790 ntBASIC2.38□□□□□ -2.03
TOP1P11387 AL117336.1-201ENST00000439198 380 ntTSL 2 BASIC2.38□□□□□ -2.03
TOP1P11387 AC118469.1-201ENST00000442943 488 ntBASIC2.38□□□□□ -2.03
TOP1P11387 MIR4435-2HG-213ENST00000451884 423 ntTSL 3 BASIC2.38□□□□□ -2.03
TOP1P11387 LINC00894-208ENST00000455777 284 ntTSL 2 BASIC2.38□□□□□ -2.03
TOP1P11387 AL359915.2-203ENST00000457043 540 ntTSL 3 BASIC2.38□□□□□ -2.03
TOP1P11387 CHRM3-AS2-203ENST00000458325 895 ntTSL 2 BASIC2.38□□□□□ -2.03
TOP1P11387 AC025033.1-201ENST00000463883 194 ntBASIC2.38□□□□□ -2.03
TOP1P11387 AC022272.1-201ENST00000503478 777 ntTSL 2 BASIC2.38□□□□□ -2.03
TOP1P11387 RNU1-40P-201ENST00000516816 164 ntBASIC2.38□□□□□ -2.03
TOP1P11387 RNU1-97P-201ENST00000516872 164 ntBASIC2.38□□□□□ -2.03
TOP1P11387 AC068880.3-201ENST00000519185 179 ntTSL 5 BASIC2.38□□□□□ -2.03
TOP1P11387 AC060788.1-201ENST00000521318 469 ntBASIC2.38□□□□□ -2.03
TOP1P11387 AL133241.1-201ENST00000556832 487 ntBASIC2.38□□□□□ -2.03
TOP1P11387 AL138976.2-201ENST00000563989 694 ntBASIC2.38□□□□□ -2.03
TOP1P11387 AC012414.6-201ENST00000568241 401 ntBASIC2.38□□□□□ -2.03
TOP1P11387 UBE2L4-201ENST00000587688 464 ntBASIC2.38□□□□□ -2.03
TOP1P11387 AC016229.1-201ENST00000589242 487 ntTSL 5 BASIC2.38□□□□□ -2.03
TOP1P11387 GALNT1-205ENST00000591081 1120 ntTSL 1 (best) BASIC2.38□□□□□ -2.03
TOP1P11387 BNIP3P23-201ENST00000599655 511 ntBASIC2.38□□□□□ -2.03
TOP1P11387 AC025165.5-201ENST00000602802 578 ntBASIC2.38□□□□□ -2.03
Retrieved 100 of 98,524 protein–RNA pairs in 116 ms