Protein–RNA interactions for Protein: P08254

MMP3, Stromelysin-1, humanhuman

Predictions only

Length 477 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MMP3P08254 SNORD60.2-201ENST00000516883 86 ntBASIC3.26□□□□□ -1.89
MMP3P08254 RNU6-685P-201ENST00000517088 95 ntBASIC3.26□□□□□ -1.89
MMP3P08254 IGHVII-62-1-201ENST00000519283 235 ntBASIC3.26□□□□□ -1.89
MMP3P08254 MIR3921-201ENST00000577308 85 ntBASIC3.26□□□□□ -1.89
MMP3P08254 AC007631.1-201ENST00000578545 189 ntTSL 3 BASIC3.26□□□□□ -1.89
MMP3P08254 AC138761.3-201ENST00000579993 334 ntBASIC3.26□□□□□ -1.89
MMP3P08254 AC024153.1-201ENST00000603103 365 ntBASIC3.26□□□□□ -1.89
MMP3P08254 BNIP3P10-201ENST00000605360 577 ntBASIC3.26□□□□□ -1.89
MMP3P08254 AL390240.1-201ENST00000612950 384 ntBASIC3.26□□□□□ -1.89
MMP3P08254 U6.42-201ENST00000618440 107 ntBASIC3.26□□□□□ -1.89
MMP3P08254 AC006504.8-201ENST00000621046 635 ntBASIC3.26□□□□□ -1.89
MMP3P08254 AC007405.1-203ENST00000623667 932 ntTSL 5 BASIC3.26□□□□□ -1.89
MMP3P08254 AC090617.10-201ENST00000624308 134 ntBASIC3.26□□□□□ -1.89
MMP3P08254 EBAG9-210ENST00000620557 2186 ntAPPRIS P1 TSL 3 BASIC3.26□□□□□ -1.89
MMP3P08254 AL136360.1-201ENST00000503377 1900 ntBASIC3.26□□□□□ -1.89
MMP3P08254 POLK-217ENST00000515295 1438 ntTSL 1 (best) BASIC3.26□□□□□ -1.89
MMP3P08254 TPTE2P4-201ENST00000258589 1605 ntBASIC3.26□□□□□ -1.89
MMP3P08254 SDAD1P2-201ENST00000441308 2028 ntBASIC3.26□□□□□ -1.89
MMP3P08254 OR10AG1-202ENST00000641071 2807 ntAPPRIS P1 BASIC3.25□□□□□ -1.89
MMP3P08254 TBC1D15-210ENST00000485960 2489 ntAPPRIS P1 TSL 1 (best) BASIC3.25□□□□□ -1.89
MMP3P08254 RXFP1-201ENST00000307765 3842 ntAPPRIS P1 TSL 1 (best) BASIC3.25□□□□□ -1.89
MMP3P08254 RNU6-50P-201ENST00000362356 103 ntBASIC3.25□□□□□ -1.89
MMP3P08254 Y_RNA.70-201ENST00000362886 110 ntBASIC3.25□□□□□ -1.89
MMP3P08254 RNU6-38P-201ENST00000384085 107 ntBASIC3.25□□□□□ -1.89
MMP3P08254 MIR325-201ENST00000385260 98 ntBASIC3.25□□□□□ -1.89
MMP3P08254 U3.42-201ENST00000408746 214 ntBASIC3.25□□□□□ -1.89
MMP3P08254 RN7SKP285-201ENST00000410137 318 ntBASIC3.25□□□□□ -1.89
MMP3P08254 RNU6-193P-201ENST00000410977 107 ntBASIC3.25□□□□□ -1.89
MMP3P08254 RNA5SP184-201ENST00000411071 108 ntBASIC3.25□□□□□ -1.89
MMP3P08254 RNU2-71P-201ENST00000411395 189 ntBASIC3.25□□□□□ -1.89
MMP3P08254 Z85995.1-201ENST00000415547 335 ntBASIC3.25□□□□□ -1.89
MMP3P08254 AC073311.1-201ENST00000420146 505 ntTSL 5 BASIC3.25□□□□□ -1.89
MMP3P08254 NUP35P1-201ENST00000422734 947 ntBASIC3.25□□□□□ -1.89
MMP3P08254 AC087499.2-201ENST00000432861 149 ntBASIC3.25□□□□□ -1.89
MMP3P08254 KRTAP19-11P-201ENST00000439851 104 ntBASIC3.25□□□□□ -1.89
MMP3P08254 PIGFP3-201ENST00000441918 722 ntBASIC3.25□□□□□ -1.89
MMP3P08254 CALM1P1-201ENST00000442082 433 ntBASIC3.25□□□□□ -1.89
MMP3P08254 LINC00571-203ENST00000454060 525 ntTSL 3 BASIC3.25□□□□□ -1.89
MMP3P08254 RNU6-333P-201ENST00000459117 107 ntBASIC3.25□□□□□ -1.89
MMP3P08254 RPL21P99-201ENST00000480369 423 ntBASIC3.25□□□□□ -1.89
MMP3P08254 RPL39P36-201ENST00000490784 156 ntBASIC3.25□□□□□ -1.89
MMP3P08254 AC025475.1-201ENST00000512939 487 ntTSL 3 BASIC3.25□□□□□ -1.89
MMP3P08254 AC010265.1-201ENST00000513509 211 ntBASIC3.25□□□□□ -1.89
MMP3P08254 RNU6-927P-201ENST00000516199 100 ntBASIC3.25□□□□□ -1.89
MMP3P08254 AC099554.1-201ENST00000520032 572 ntTSL 3 BASIC3.25□□□□□ -1.89
MMP3P08254 CENPUP1-201ENST00000526649 1202 ntBASIC3.25□□□□□ -1.89
MMP3P08254 AC079600.2-201ENST00000550076 130 ntBASIC3.25□□□□□ -1.89
MMP3P08254 DUSP12P1-201ENST00000612874 516 ntBASIC3.25□□□□□ -1.89
MMP3P08254 AP001486.3-201ENST00000615334 372 ntBASIC3.25□□□□□ -1.89
MMP3P08254 uc_338.34-201ENST00000617467 174 ntBASIC3.25□□□□□ -1.89
MMP3P08254 CDKN3-212ENST00000620759 196 ntTSL 5 BASIC3.25□□□□□ -1.89
MMP3P08254 MUC15-201ENST00000281268 2968 ntTSL 5 BASIC3.25□□□□□ -1.89
MMP3P08254 PLSCR5-201ENST00000443512 1969 ntAPPRIS P1 TSL 1 (best) BASIC3.25□□□□□ -1.89
MMP3P08254 AL137003.2-201ENST00000606924 2538 ntBASIC3.25□□□□□ -1.89
MMP3P08254 AC103710.2-202ENST00000641454 2853 ntBASIC3.25□□□□□ -1.89
MMP3P08254 HSPA8P4-201ENST00000511877 1920 ntBASIC3.25□□□□□ -1.89
MMP3P08254 SERPINI2-202ENST00000461846 1514 ntAPPRIS P1 TSL 1 (best) BASIC3.24□□□□□ -1.89
MMP3P08254 SLC39A10-201ENST00000359634 5322 ntAPPRIS P1 TSL 1 (best) BASIC3.24□□□□□ -1.89
MMP3P08254 MUC7-203ENST00000456088 2479 ntAPPRIS P2 TSL 4 BASIC3.24□□□□□ -1.89
MMP3P08254 SPAG11A-202ENST00000326625 445 ntTSL 5 BASIC3.24□□□□□ -1.89
MMP3P08254 Y_RNA.231-201ENST00000364358 102 ntBASIC3.24□□□□□ -1.89
MMP3P08254 BTLA-202ENST00000383680 726 ntAPPRIS ALT2 TSL 1 (best) BASIC3.24□□□□□ -1.89
MMP3P08254 RNU6-817P-201ENST00000391083 104 ntBASIC3.24□□□□□ -1.89
MMP3P08254 PPP3R1-202ENST00000409377 684 ntTSL 3 BASIC3.24□□□□□ -1.89
MMP3P08254 RNU6-1148P-201ENST00000410992 104 ntBASIC3.24□□□□□ -1.89
MMP3P08254 AL078645.1-201ENST00000414377 423 ntTSL 3 BASIC3.24□□□□□ -1.89
MMP3P08254 AL359195.1-201ENST00000416657 339 ntTSL 3 BASIC3.24□□□□□ -1.89
MMP3P08254 AFDN-AS1-202ENST00000417244 182 ntTSL 2 BASIC3.24□□□□□ -1.89
MMP3P08254 AC092573.2-201ENST00000434546 243 ntBASIC3.24□□□□□ -1.89
MMP3P08254 MTCO3P18-201ENST00000440206 761 ntBASIC3.24□□□□□ -1.89
MMP3P08254 RPL32P28-201ENST00000443577 397 ntBASIC3.24□□□□□ -1.89
MMP3P08254 CBWD4P-201ENST00000445695 655 ntBASIC3.24□□□□□ -1.89
MMP3P08254 AC104058.1-201ENST00000448028 297 ntBASIC3.24□□□□□ -1.89
MMP3P08254 RNU6-953P-201ENST00000459154 107 ntBASIC3.24□□□□□ -1.89
MMP3P08254 AC004801.2-202ENST00000463559 283 ntBASIC3.24□□□□□ -1.89
MMP3P08254 RPL38P4-201ENST00000502376 214 ntBASIC3.24□□□□□ -1.89
MMP3P08254 ENSA-210ENST00000503241 574 ntTSL 3 BASIC3.24□□□□□ -1.89
MMP3P08254 LINC02220-201ENST00000510065 270 ntTSL 5 BASIC3.24□□□□□ -1.89
MMP3P08254 AC087439.1-201ENST00000517920 398 ntTSL 3 BASIC3.24□□□□□ -1.89
MMP3P08254 HDAC2-AS2-206ENST00000517965 850 ntTSL 3 BASIC3.24□□□□□ -1.89
MMP3P08254 AC023050.3-201ENST00000541142 333 ntBASIC3.24□□□□□ -1.89
MMP3P08254 LINC02350-201ENST00000544419 480 ntTSL 3 BASIC3.24□□□□□ -1.89
MMP3P08254 BNIP3P6-201ENST00000549284 499 ntBASIC3.24□□□□□ -1.89
MMP3P08254 LINC02328-203ENST00000557195 682 ntTSL 3 BASIC3.24□□□□□ -1.89
MMP3P08254 AC022960.1-201ENST00000582269 348 ntTSL 3 BASIC3.24□□□□□ -1.89
MMP3P08254 MIR4424-201ENST00000585257 86 ntBASIC3.24□□□□□ -1.89
MMP3P08254 BNIP3P9-201ENST00000603714 553 ntBASIC3.24□□□□□ -1.89
MMP3P08254 AC098826.3-201ENST00000603823 466 ntBASIC3.24□□□□□ -1.89
MMP3P08254 MIR15A-201ENST00000607334 83 ntBASIC3.24□□□□□ -1.89
MMP3P08254 Y_RNA.804-201ENST00000615262 101 ntBASIC3.24□□□□□ -1.89
MMP3P08254 AL359547.2-201ENST00000615810 418 ntBASIC3.24□□□□□ -1.89
MMP3P08254 SYNE2-212ENST00000554584 20508 ntTSL 5 BASIC3.24□□□□□ -1.89
MMP3P08254 CCDC30-212ENST00000507855 2445 ntAPPRIS ALT2 TSL 1 (best) BASIC3.24□□□□□ -1.89
MMP3P08254 SLC38A9-201ENST00000318672 2369 ntAPPRIS P1 TSL 2 BASIC3.24□□□□□ -1.89
MMP3P08254 DOPEY1-203ENST00000369739 7743 ntAPPRIS ALT1 TSL 1 (best) BASIC3.24□□□□□ -1.89
MMP3P08254 DPP10-205ENST00000410059 6278 ntAPPRIS ALT2 TSL 1 (best) BASIC3.23□□□□□ -1.89
MMP3P08254 ADGRG4-203ENST00000394143 9931 ntAPPRIS P2 TSL 1 (best) BASIC3.23□□□□□ -1.89
MMP3P08254 PCAT4-201ENST00000504263 2091 ntTSL 1 (best) BASIC3.23□□□□□ -1.89
MMP3P08254 CLOCK-201ENST00000309964 10304 ntAPPRIS P1 TSL 1 (best) BASIC3.23□□□□□ -1.89
MMP3P08254 ZBTB20-201ENST00000357258 27125 ntAPPRIS P1 TSL 1 (best) BASIC3.23□□□□□ -1.89
Retrieved 100 of 98,524 protein–RNA pairs in 109.9 ms