Protein–RNA interactions for Protein: O95477

ABCA1, ATP-binding cassette sub-family A member 1, humanhuman

Predictions only

Length 2,261 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ABCA1O95477 AC064852.1-201ENST00000427571 851 ntTSL 3 BASIC0.8□□□□□ -2.28
ABCA1O95477 RSU1P2-202ENST00000437884 485 ntBASIC0.8□□□□□ -2.28
ABCA1O95477 HMGB3P17-201ENST00000504195 649 ntBASIC0.8□□□□□ -2.28
ABCA1O95477 MRPL42-203ENST00000547098 701 ntTSL 3 BASIC0.8□□□□□ -2.28
ABCA1O95477 HSBP1P1-201ENST00000555205 166 ntBASIC0.8□□□□□ -2.28
ABCA1O95477 MIR4299-201ENST00000577899 72 ntBASIC0.8□□□□□ -2.28
ABCA1O95477 AC005154.1-222ENST00000579024 341 ntTSL 5 BASIC0.8□□□□□ -2.28
ABCA1O95477 AC023394.2-201ENST00000581987 792 ntTSL 5 BASIC0.8□□□□□ -2.28
ABCA1O95477 AC040174.2-201ENST00000602701 465 ntBASIC0.8□□□□□ -2.28
ABCA1O95477 FRG1HP-204ENST00000617940 757 ntBASIC0.8□□□□□ -2.28
ABCA1O95477 SNORA62.1-201ENST00000364287 154 ntBASIC0.79□□□□□ -2.28
ABCA1O95477 SNAPC3-201ENST00000380799 753 ntTSL 3 BASIC0.79□□□□□ -2.28
ABCA1O95477 TRAJ22-201ENST00000390515 63 ntAPPRIS P1 BASIC0.79□□□□□ -2.28
ABCA1O95477 RNU2-41P-201ENST00000410991 178 ntBASIC0.79□□□□□ -2.28
ABCA1O95477 CCDC58P2-201ENST00000417131 366 ntBASIC0.79□□□□□ -2.28
ABCA1O95477 ZRANB2-AS2-204ENST00000430605 213 ntTSL 2 BASIC0.79□□□□□ -2.28
ABCA1O95477 AL357134.1-201ENST00000445848 426 ntBASIC0.79□□□□□ -2.28
ABCA1O95477 MTND3P4-201ENST00000453537 303 ntBASIC0.79□□□□□ -2.28
ABCA1O95477 RNU6-1132P-201ENST00000459214 107 ntBASIC0.79□□□□□ -2.28
ABCA1O95477 LINC02032-201ENST00000490465 391 ntTSL 2 BASIC0.79□□□□□ -2.28
ABCA1O95477 AC131211.1-201ENST00000497285 483 ntTSL 5 BASIC0.79□□□□□ -2.28
ABCA1O95477 LINC02465-202ENST00000508724 503 ntTSL 3 BASIC0.79□□□□□ -2.28
ABCA1O95477 AC105313.1-201ENST00000509121 353 ntBASIC0.79□□□□□ -2.28
ABCA1O95477 AC011586.1-201ENST00000521055 458 ntTSL 3 BASIC0.79□□□□□ -2.28
ABCA1O95477 AC084882.1-201ENST00000561254 555 ntTSL 4 BASIC0.79□□□□□ -2.28
ABCA1O95477 AC022254.1-201ENST00000567857 235 ntBASIC0.79□□□□□ -2.28
ABCA1O95477 AC015727.1-201ENST00000572792 512 ntTSL 5 BASIC0.79□□□□□ -2.28
ABCA1O95477 UBE2L4-201ENST00000587688 464 ntBASIC0.79□□□□□ -2.28
ABCA1O95477 AL020997.3-201ENST00000602843 359 ntBASIC0.79□□□□□ -2.28
ABCA1O95477 AC079416.3-201ENST00000624479 549 ntBASIC0.79□□□□□ -2.28
ABCA1O95477 AC097655.1-201ENST00000635075 318 ntBASIC0.79□□□□□ -2.28
ABCA1O95477 OR6C75-201ENST00000343399 939 ntAPPRIS P1 BASIC0.78□□□□□ -2.28
ABCA1O95477 RNU6-1078P-201ENST00000364522 103 ntBASIC0.78□□□□□ -2.28
ABCA1O95477 MIR1302-8-201ENST00000408342 128 ntBASIC0.78□□□□□ -2.28
ABCA1O95477 RNA5SP127-201ENST00000411051 133 ntBASIC0.78□□□□□ -2.28
ABCA1O95477 GPC5-IT1-201ENST00000416664 658 ntTSL 3 BASIC0.78□□□□□ -2.28
ABCA1O95477 Z80107.1-201ENST00000436830 412 ntBASIC0.78□□□□□ -2.28
ABCA1O95477 AL450344.2-201ENST00000455229 614 ntTSL 5 BASIC0.78□□□□□ -2.28
ABCA1O95477 MRPS17P3-201ENST00000465453 385 ntBASIC0.78□□□□□ -2.28
ABCA1O95477 RPS27AP10-201ENST00000496103 208 ntBASIC0.78□□□□□ -2.28
ABCA1O95477 AL137804.1-201ENST00000528872 576 ntTSL 3 BASIC0.78□□□□□ -2.28
ABCA1O95477 CBX3P7-201ENST00000532876 502 ntBASIC0.78□□□□□ -2.28
ABCA1O95477 MIR4714-201ENST00000580728 77 ntBASIC0.78□□□□□ -2.28
ABCA1O95477 AC091946.2-201ENST00000606105 291 ntBASIC0.78□□□□□ -2.28
ABCA1O95477 ATG5-207ENST00000613993 733 ntTSL 1 (best) BASIC0.78□□□□□ -2.28
ABCA1O95477 C7orf66-201ENST00000624695 435 ntTSL 2 BASIC0.78□□□□□ -2.28
ABCA1O95477 ZNF663P-202ENST00000641770 1131 ntBASIC0.78□□□□□ -2.28
ABCA1O95477 ZNF404-201ENST00000324394 1844 ntAPPRIS ALT2 TSL 1 (best) BASIC0.78□□□□□ -2.28
ABCA1O95477 RNU6-748P-201ENST00000384648 107 ntBASIC0.78□□□□□ -2.28
ABCA1O95477 AC004870.3-202ENST00000412996 432 ntTSL 3 BASIC0.78□□□□□ -2.28
ABCA1O95477 OR6C66P-201ENST00000414917 930 ntBASIC0.78□□□□□ -2.28
ABCA1O95477 CYCSP48-201ENST00000417124 323 ntBASIC0.78□□□□□ -2.28
ABCA1O95477 AL023581.1-201ENST00000423500 455 ntTSL 2 BASIC0.78□□□□□ -2.28
ABCA1O95477 AC241644.2-201ENST00000426504 480 ntTSL 3 BASIC0.78□□□□□ -2.28
ABCA1O95477 TRBV26OR9-2-201ENST00000432077 293 ntBASIC0.78□□□□□ -2.28
ABCA1O95477 AC234064.1-201ENST00000436312 247 ntBASIC0.78□□□□□ -2.28
ABCA1O95477 AC241584.1-201ENST00000438469 1241 ntBASIC0.78□□□□□ -2.28
ABCA1O95477 AC092393.1-201ENST00000439625 742 ntBASIC0.78□□□□□ -2.28
ABCA1O95477 COX6CP18-201ENST00000448769 222 ntBASIC0.78□□□□□ -2.28
ABCA1O95477 AC006512.1-201ENST00000468816 291 ntBASIC0.78□□□□□ -2.28
ABCA1O95477 CPHL1P-203ENST00000471823 523 ntTSL 5 BASIC0.78□□□□□ -2.28
ABCA1O95477 RNA5SP330-201ENST00000517096 96 ntBASIC0.78□□□□□ -2.28
ABCA1O95477 TRIQK-209ENST00000519969 555 ntAPPRIS P1 TSL 4 BASIC0.78□□□□□ -2.28
ABCA1O95477 AC010175.1-201ENST00000538219 224 ntTSL 5 BASIC0.78□□□□□ -2.28
ABCA1O95477 AC012378.1-201ENST00000561155 364 ntTSL 3 BASIC0.78□□□□□ -2.28
ABCA1O95477 BNIP3P25-201ENST00000596023 559 ntBASIC0.78□□□□□ -2.28
ABCA1O95477 7SK.7-201ENST00000603504 247 ntBASIC0.78□□□□□ -2.28
ABCA1O95477 AC022387.2-201ENST00000604050 448 ntBASIC0.78□□□□□ -2.28
ABCA1O95477 RNU6-91P-201ENST00000607774 107 ntBASIC0.78□□□□□ -2.28
ABCA1O95477 MIR924-201ENST00000638017 53 ntBASIC0.78□□□□□ -2.28
ABCA1O95477 DNAH14-203ENST00000366848 929 ntTSL 1 (best) BASIC0.77□□□□□ -2.29
ABCA1O95477 RNU6-40P-201ENST00000384254 107 ntBASIC0.77□□□□□ -2.29
ABCA1O95477 RNU6ATAC27P-201ENST00000408289 119 ntBASIC0.77□□□□□ -2.29
ABCA1O95477 AC064871.1-202ENST00000413954 382 ntTSL 5 BASIC0.77□□□□□ -2.29
ABCA1O95477 AL451054.2-201ENST00000420896 202 ntBASIC0.77□□□□□ -2.29
ABCA1O95477 RPL7P34-201ENST00000433316 712 ntBASIC0.77□□□□□ -2.29
ABCA1O95477 AL163192.1-201ENST00000448858 708 ntTSL 5 BASIC0.77□□□□□ -2.29
ABCA1O95477 RPS20P20-201ENST00000460498 340 ntBASIC0.77□□□□□ -2.29
ABCA1O95477 AC124293.1-201ENST00000530034 493 ntBASIC0.77□□□□□ -2.29
ABCA1O95477 AP005901.2-201ENST00000581690 525 ntTSL 3 BASIC0.77□□□□□ -2.29
ABCA1O95477 AC002545.1-201ENST00000592511 181 ntBASIC0.77□□□□□ -2.29
ABCA1O95477 AC211469.2-201ENST00000605461 205 ntBASIC0.77□□□□□ -2.29
ABCA1O95477 AL357054.2-201ENST00000607644 423 ntTSL 5 BASIC0.77□□□□□ -2.29
ABCA1O95477 MIR5739-201ENST00000619803 80 ntBASIC0.77□□□□□ -2.29
ABCA1O95477 BIRC6-AS2-201ENST00000623382 589 ntTSL 2 BASIC0.77□□□□□ -2.29
ABCA1O95477 GS1-279B7.1-204ENST00000641809 378 ntBASIC0.77□□□□□ -2.29
ABCA1O95477 RNU1-58P-201ENST00000362413 163 ntBASIC0.77□□□□□ -2.29
ABCA1O95477 SNORD114-23-201ENST00000363536 72 ntBASIC0.77□□□□□ -2.29
ABCA1O95477 RNU6-878P-201ENST00000384578 110 ntBASIC0.77□□□□□ -2.29
ABCA1O95477 RNU6-750P-201ENST00000390946 107 ntBASIC0.77□□□□□ -2.29
ABCA1O95477 NDUFS5P1-201ENST00000405668 289 ntBASIC0.77□□□□□ -2.29
ABCA1O95477 RPL21P90-201ENST00000415692 466 ntBASIC0.77□□□□□ -2.29
ABCA1O95477 U51244.1-201ENST00000423120 374 ntTSL 3 BASIC0.77□□□□□ -2.29
ABCA1O95477 RNU6-885P-201ENST00000516607 104 ntBASIC0.77□□□□□ -2.29
ABCA1O95477 AC068992.1-202ENST00000519280 270 ntTSL 3 BASIC0.77□□□□□ -2.29
ABCA1O95477 AP003497.1-201ENST00000528472 562 ntBASIC0.77□□□□□ -2.29
ABCA1O95477 MMP2-AS1-201ENST00000565307 593 ntTSL 4 BASIC0.77□□□□□ -2.29
ABCA1O95477 UBE2Q2P6-201ENST00000612666 153 ntBASIC0.77□□□□□ -2.29
ABCA1O95477 MIR6513-201ENST00000621188 64 ntBASIC0.77□□□□□ -2.29
ABCA1O95477 AC008443.7-201ENST00000622195 246 ntBASIC0.77□□□□□ -2.29
Retrieved 100 of 98,524 protein–RNA pairs in 127.9 ms