Protein–RNA interactions for Protein: O75400

PRPF40A, Pre-mRNA-processing factor 40 homolog A, humanhuman

Known RBP Predictions only

Length 957 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF40AO75400 IPO5P1-202ENST00000600039 287 ntBASIC4.68□□□□□ -1.66
PRPF40AO75400 MIR6716-201ENST00000613413 80 ntBASIC4.68□□□□□ -1.66
PRPF40AO75400 SCARNA4-202ENST00000625402 129 ntBASIC4.68□□□□□ -1.66
PRPF40AO75400 OR4C15-202ENST00000642128 951 ntAPPRIS P1 BASIC4.68□□□□□ -1.66
PRPF40AO75400 LATS1-201ENST00000253339 4256 ntAPPRIS P1 TSL 1 (best) BASIC4.68□□□□□ -1.66
PRPF40AO75400 FAN1-202ENST00000561594 2738 ntTSL 1 (best) BASIC4.67□□□□□ -1.66
PRPF40AO75400 UBE3AP2-201ENST00000429033 2259 ntBASIC4.67□□□□□ -1.66
PRPF40AO75400 ZBED5-201ENST00000413761 2512 ntAPPRIS P1 TSL 1 (best) BASIC4.67□□□□□ -1.66
PRPF40AO75400 MGA-201ENST00000219905 12042 ntAPPRIS P4 TSL 5 BASIC4.67□□□□□ -1.66
PRPF40AO75400 RPL26-201ENST00000293842 524 ntAPPRIS P1 TSL 1 (best) BASIC4.67□□□□□ -1.66
PRPF40AO75400 RNU6-99P-201ENST00000364721 107 ntBASIC4.67□□□□□ -1.66
PRPF40AO75400 Y_RNA.389-201ENST00000383924 113 ntBASIC4.67□□□□□ -1.66
PRPF40AO75400 Y_RNA.577-201ENST00000384794 101 ntBASIC4.67□□□□□ -1.66
PRPF40AO75400 HMGN2P8-201ENST00000391458 268 ntBASIC4.67□□□□□ -1.66
PRPF40AO75400 TMEM167AP1-201ENST00000423409 219 ntBASIC4.67□□□□□ -1.66
PRPF40AO75400 AL354824.2-201ENST00000458004 446 ntTSL 3 BASIC4.67□□□□□ -1.66
PRPF40AO75400 RN7SL93P-201ENST00000463035 293 ntBASIC4.67□□□□□ -1.66
PRPF40AO75400 MTATP8P1-201ENST00000467115 207 ntBASIC4.67□□□□□ -1.66
PRPF40AO75400 Y_RNA.721-201ENST00000517207 102 ntBASIC4.67□□□□□ -1.66
PRPF40AO75400 CASP1P1-201ENST00000526345 212 ntBASIC4.67□□□□□ -1.66
PRPF40AO75400 HSBP1P1-201ENST00000555205 166 ntBASIC4.67□□□□□ -1.66
PRPF40AO75400 AC009292.2-201ENST00000558889 291 ntTSL 5 BASIC4.67□□□□□ -1.66
PRPF40AO75400 FTX_3.1-201ENST00000610451 147 ntBASIC4.67□□□□□ -1.66
PRPF40AO75400 FAM27D1-201ENST00000612308 341 ntBASIC4.67□□□□□ -1.66
PRPF40AO75400 PPP1R9A-208ENST00000456331 10090 ntTSL 1 (best) BASIC4.67□□□□□ -1.66
PRPF40AO75400 CENPF-201ENST00000366955 10307 ntAPPRIS P1 TSL 1 (best) BASIC4.67□□□□□ -1.66
PRPF40AO75400 HSPA4L-202ENST00000505726 2639 ntTSL 2 BASIC4.67□□□□□ -1.66
PRPF40AO75400 UBE2D3-233ENST00000618836 3472 ntAPPRIS ALT1 TSL 5 BASIC4.67□□□□□ -1.66
PRPF40AO75400 UBE3A-202ENST00000397954 2873 ntTSL 5 BASIC4.67□□□□□ -1.66
PRPF40AO75400 TJP1-204ENST00000400011 6764 ntAPPRIS ALT2 TSL 1 (best) BASIC4.67□□□□□ -1.66
PRPF40AO75400 MTND5P1-201ENST00000445440 1375 ntBASIC4.66□□□□□ -1.66
PRPF40AO75400 BIRC3-201ENST00000263464 5197 ntAPPRIS P1 TSL 1 (best) BASIC4.66□□□□□ -1.66
PRPF40AO75400 RNF38-210ENST00000611646 5185 ntTSL 5 BASIC4.66□□□□□ -1.66
PRPF40AO75400 FMNL2-202ENST00000475377 3648 ntTSL 5 BASIC4.66□□□□□ -1.66
PRPF40AO75400 TMCO5A-203ENST00000558158 2894 ntAPPRIS ALT2 TSL 3 BASIC4.66□□□□□ -1.66
PRPF40AO75400 AC022336.2-201ENST00000568966 2538 ntBASIC4.66□□□□□ -1.66
PRPF40AO75400 ADGRL2-210ENST00000370728 6302 ntAPPRIS ALT2 TSL 5 BASIC4.66□□□□□ -1.66
PRPF40AO75400 ZGRF1-212ENST00000612287 2176 ntTSL 1 (best) BASIC4.66□□□□□ -1.66
PRPF40AO75400 Y_RNA.149-201ENST00000363558 117 ntBASIC4.66□□□□□ -1.66
PRPF40AO75400 RN7SKP227-201ENST00000364445 330 ntBASIC4.66□□□□□ -1.66
PRPF40AO75400 RNU6-217P-201ENST00000384164 104 ntBASIC4.66□□□□□ -1.66
PRPF40AO75400 RNU6-658P-201ENST00000384606 106 ntBASIC4.66□□□□□ -1.66
PRPF40AO75400 Y_RNA.557-201ENST00000384680 107 ntBASIC4.66□□□□□ -1.66
PRPF40AO75400 AC010163.2-201ENST00000416341 381 ntTSL 2 BASIC4.66□□□□□ -1.66
PRPF40AO75400 NUP35P1-201ENST00000422734 947 ntBASIC4.66□□□□□ -1.66
PRPF40AO75400 HMGN2P30-201ENST00000423237 256 ntBASIC4.66□□□□□ -1.66
PRPF40AO75400 GAS5-208ENST00000425771 242 ntTSL 3 BASIC4.66□□□□□ -1.66
PRPF40AO75400 HCG2040054-201ENST00000435331 434 ntTSL 3 BASIC4.66□□□□□ -1.66
PRPF40AO75400 AC112715.1-201ENST00000445534 350 ntTSL 3 BASIC4.66□□□□□ -1.66
PRPF40AO75400 FTH1P2-201ENST00000466086 412 ntBASIC4.66□□□□□ -1.66
PRPF40AO75400 AC010420.1-201ENST00000515077 509 ntTSL 3 BASIC4.66□□□□□ -1.66
PRPF40AO75400 RNU6-475P-201ENST00000516073 104 ntBASIC4.66□□□□□ -1.66
PRPF40AO75400 AP005902.1-201ENST00000521358 186 ntBASIC4.66□□□□□ -1.66
PRPF40AO75400 SPTY2D1-AS1-203ENST00000542172 331 ntAPPRIS ALT2 TSL 1 (best) BASIC4.66□□□□□ -1.66
PRPF40AO75400 AL163973.3-201ENST00000547093 430 ntTSL 3 BASIC4.66□□□□□ -1.66
PRPF40AO75400 MIR8076-201ENST00000611401 83 ntBASIC4.66□□□□□ -1.66
PRPF40AO75400 HMGB1P24-202ENST00000615653 685 ntBASIC4.66□□□□□ -1.66
PRPF40AO75400 AC087588.2-201ENST00000617667 426 ntBASIC4.66□□□□□ -1.66
PRPF40AO75400 AC138627.2-201ENST00000624202 601 ntBASIC4.66□□□□□ -1.66
PRPF40AO75400 MPP6-209ENST00000625307 126 ntTSL 5 BASIC4.66□□□□□ -1.66
PRPF40AO75400 AL589740.1-204ENST00000634677 630 ntTSL 4 BASIC4.66□□□□□ -1.66
PRPF40AO75400 AL606534.2-204ENST00000635008 178 ntBASIC4.66□□□□□ -1.66
PRPF40AO75400 TUG1-201ENST00000519077 5673 ntTSL 1 (best) BASIC4.66□□□□□ -1.66
PRPF40AO75400 RAP1GDS1-205ENST00000408927 3681 ntAPPRIS P3 TSL 2 BASIC4.66□□□□□ -1.66
PRPF40AO75400 CLHC1-201ENST00000401408 2248 ntAPPRIS P1 TSL 1 (best) BASIC4.66□□□□□ -1.66
PRPF40AO75400 FGD4-213ENST00000546442 3503 ntTSL 5 BASIC4.66□□□□□ -1.66
PRPF40AO75400 USH2A-201ENST00000307340 18883 ntAPPRIS P1 TSL 1 (best) BASIC4.66□□□□□ -1.66
PRPF40AO75400 DNAJC10-201ENST00000264065 20129 ntAPPRIS P1 TSL 1 (best) BASIC4.66□□□□□ -1.66
PRPF40AO75400 ARID2-206ENST00000457135 4356 ntTSL 1 (best) BASIC4.66□□□□□ -1.66
PRPF40AO75400 GPRC6A-201ENST00000310357 2860 ntAPPRIS P1 TSL 1 (best) BASIC4.66□□□□□ -1.66
PRPF40AO75400 AL672296.1-201ENST00000427780 2158 ntBASIC4.65□□□□□ -1.66
PRPF40AO75400 DTWD1-201ENST00000251250 13776 ntAPPRIS P1 TSL 1 (best) BASIC4.65□□□□□ -1.66
PRPF40AO75400 Y_RNA.424-201ENST00000384063 103 ntBASIC4.65□□□□□ -1.67
PRPF40AO75400 RNU6-101P-201ENST00000410323 104 ntBASIC4.65□□□□□ -1.67
PRPF40AO75400 RPL23AP26-201ENST00000412728 464 ntBASIC4.65□□□□□ -1.67
PRPF40AO75400 AC012370.1-201ENST00000419244 530 ntTSL 3 BASIC4.65□□□□□ -1.67
PRPF40AO75400 AL024508.1-201ENST00000432477 505 ntTSL 2 BASIC4.65□□□□□ -1.67
PRPF40AO75400 RPL23AP46-201ENST00000438548 490 ntBASIC4.65□□□□□ -1.67
PRPF40AO75400 LINC01594-201ENST00000445083 611 ntTSL 5 BASIC4.65□□□□□ -1.67
PRPF40AO75400 NUTF2P3-201ENST00000448540 384 ntBASIC4.65□□□□□ -1.67
PRPF40AO75400 RPL37P4-201ENST00000448908 268 ntBASIC4.65□□□□□ -1.67
PRPF40AO75400 AC010974.1-201ENST00000450509 374 ntTSL 3 BASIC4.65□□□□□ -1.67
PRPF40AO75400 SNORA31.9-201ENST00000516429 84 ntBASIC4.65□□□□□ -1.67
PRPF40AO75400 RNU1-103P-201ENST00000516502 125 ntBASIC4.65□□□□□ -1.67
PRPF40AO75400 RNU4-77P-201ENST00000516692 156 ntBASIC4.65□□□□□ -1.67
PRPF40AO75400 AP002004.1-207ENST00000531371 526 ntTSL 1 (best) BASIC4.65□□□□□ -1.67
PRPF40AO75400 AC010186.2-204ENST00000537668 439 ntBASIC4.65□□□□□ -1.67
PRPF40AO75400 AC126177.2-201ENST00000552154 452 ntTSL 3 BASIC4.65□□□□□ -1.67
PRPF40AO75400 AC087749.2-201ENST00000583910 352 ntTSL 5 BASIC4.65□□□□□ -1.67
PRPF40AO75400 AL591424.2-201ENST00000617023 128 ntBASIC4.65□□□□□ -1.67
PRPF40AO75400 WDR72-204ENST00000559418 3602 ntTSL 5 BASIC4.65□□□□□ -1.67
PRPF40AO75400 TLR8-202ENST00000311912 3367 ntAPPRIS P4 TSL 1 (best) BASIC4.65□□□□□ -1.67
PRPF40AO75400 PIGW-206ENST00000620233 2264 ntAPPRIS P1 TSL 2 BASIC4.65□□□□□ -1.67
PRPF40AO75400 AC090740.1-201ENST00000623193 2262 ntBASIC4.65□□□□□ -1.67
PRPF40AO75400 LRMP-201ENST00000354454 2504 ntAPPRIS P2 TSL 1 (best) BASIC4.65□□□□□ -1.67
PRPF40AO75400 ADGRL4-201ENST00000370742 3527 ntAPPRIS P1 TSL 1 (best) BASIC4.64□□□□□ -1.67
PRPF40AO75400 LINC00630-205ENST00000440496 2101 ntTSL 1 (best) BASIC4.64□□□□□ -1.67
PRPF40AO75400 MACF1-204ENST00000372915 23440 ntAPPRIS ALT2 TSL 5 BASIC4.64□□□□□ -1.67
PRPF40AO75400 AC018462.1-201ENST00000425966 1684 ntTSL 1 (best) BASIC4.64□□□□□ -1.67
PRPF40AO75400 LRIF1-203ENST00000494675 1912 ntAPPRIS ALT2 TSL 2 BASIC4.64□□□□□ -1.67
Retrieved 100 of 98,524 protein–RNA pairs in 104.2 ms