Protein–RNA interactions for Protein: O60391

GRIN3B, Glutamate receptor ionotropic, NMDA 3B, humanhuman

Predictions only

Length 1,043 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
GRIN3BO60391 MIR7112-201ENST00000616126 65 ntBASIC4.67□□□□□ -1.66
GRIN3BO60391 AL162373.1-201ENST00000620433 407 ntBASIC4.67□□□□□ -1.66
GRIN3BO60391 LINC00283-201ENST00000430111 1947 ntTSL 5 BASIC4.67□□□□□ -1.66
GRIN3BO60391 AL136964.1-201ENST00000622038 2990 ntBASIC4.67□□□□□ -1.66
GRIN3BO60391 CCDC121-201ENST00000324364 2342 ntAPPRIS P3 TSL 1 (best) BASIC4.67□□□□□ -1.66
GRIN3BO60391 KNTC1-201ENST00000333479 6975 ntAPPRIS P1 TSL 1 (best) BASIC4.67□□□□□ -1.66
GRIN3BO60391 TARID-205ENST00000607033 2960 ntTSL 1 (best) BASIC4.66□□□□□ -1.66
GRIN3BO60391 RNF111-206ENST00000559209 5278 ntTSL 1 (best) BASIC4.66□□□□□ -1.66
GRIN3BO60391 DEFB108F-201ENST00000344638 222 ntBASIC4.66□□□□□ -1.66
GRIN3BO60391 FTLP6-201ENST00000355274 422 ntBASIC4.66□□□□□ -1.66
GRIN3BO60391 CD84-204ENST00000368048 1098 ntAPPRIS ALT2 TSL 1 (best) BASIC4.66□□□□□ -1.66
GRIN3BO60391 RNU6-629P-201ENST00000384061 103 ntBASIC4.66□□□□□ -1.66
GRIN3BO60391 Y_RNA.428-201ENST00000384078 102 ntBASIC4.66□□□□□ -1.66
GRIN3BO60391 RNA5SP146-201ENST00000410743 123 ntBASIC4.66□□□□□ -1.66
GRIN3BO60391 ELF3-AS1-201ENST00000415582 500 ntTSL 2 BASIC4.66□□□□□ -1.66
GRIN3BO60391 UBE2D3P2-201ENST00000424409 445 ntBASIC4.66□□□□□ -1.66
GRIN3BO60391 AC017083.1-201ENST00000428093 483 ntBASIC4.66□□□□□ -1.66
GRIN3BO60391 AL354949.1-201ENST00000446438 170 ntTSL 2 BASIC4.66□□□□□ -1.66
GRIN3BO60391 RNU7-187P-201ENST00000458985 68 ntBASIC4.66□□□□□ -1.66
GRIN3BO60391 RPL21P13-201ENST00000488305 481 ntBASIC4.66□□□□□ -1.66
GRIN3BO60391 AC008243.1-201ENST00000504955 389 ntTSL 3 BASIC4.66□□□□□ -1.66
GRIN3BO60391 SUMO2P6-201ENST00000505273 288 ntBASIC4.66□□□□□ -1.66
GRIN3BO60391 AC022493.2-201ENST00000506122 481 ntBASIC4.66□□□□□ -1.66
GRIN3BO60391 SCARNA16.2-201ENST00000516520 172 ntBASIC4.66□□□□□ -1.66
GRIN3BO60391 RNA5SP384-201ENST00000516615 116 ntBASIC4.66□□□□□ -1.66
GRIN3BO60391 AP001189.6-201ENST00000528781 831 ntTSL 1 (best) BASIC4.66□□□□□ -1.66
GRIN3BO60391 G2E3-AS1-202ENST00000550118 609 ntTSL 5 BASIC4.66□□□□□ -1.66
GRIN3BO60391 AC015911.6-201ENST00000588445 457 ntTSL 3 BASIC4.66□□□□□ -1.66
GRIN3BO60391 AC010649.1-203ENST00000592230 454 ntTSL 2 BASIC4.66□□□□□ -1.66
GRIN3BO60391 RMST_4.1-201ENST00000616886 107 ntBASIC4.66□□□□□ -1.66
GRIN3BO60391 MIR7702-201ENST00000621931 59 ntBASIC4.66□□□□□ -1.66
GRIN3BO60391 CUL4B-202ENST00000371322 4902 ntAPPRIS P1 TSL 1 (best) BASIC4.66□□□□□ -1.66
GRIN3BO60391 PPP1R9A-202ENST00000340694 9689 ntAPPRIS P1 TSL 5 BASIC4.66□□□□□ -1.66
GRIN3BO60391 ZPLD1-202ENST00000466937 1531 ntAPPRIS P1 TSL 1 (best) BASIC4.66□□□□□ -1.66
GRIN3BO60391 VPS13C-201ENST00000249837 13300 ntAPPRIS P3 TSL 1 (best) BASIC4.66□□□□□ -1.66
GRIN3BO60391 MIS12-201ENST00000381165 2505 ntAPPRIS P1 TSL 1 (best) BASIC4.66□□□□□ -1.66
GRIN3BO60391 Y_RNA.47-201ENST00000362697 108 ntBASIC4.65□□□□□ -1.67
GRIN3BO60391 Y_RNA.149-201ENST00000363558 117 ntBASIC4.65□□□□□ -1.67
GRIN3BO60391 RNU6-335P-201ENST00000364563 113 ntBASIC4.65□□□□□ -1.67
GRIN3BO60391 RNA5SP235-201ENST00000365411 114 ntBASIC4.65□□□□□ -1.67
GRIN3BO60391 MIR124-3-201ENST00000384866 87 ntBASIC4.65□□□□□ -1.67
GRIN3BO60391 MIR514A1-201ENST00000385133 98 ntBASIC4.65□□□□□ -1.67
GRIN3BO60391 MIR301A-201ENST00000385261 86 ntBASIC4.65□□□□□ -1.67
GRIN3BO60391 RNU6-55P-201ENST00000411092 107 ntBASIC4.65□□□□□ -1.67
GRIN3BO60391 CYCSP33-201ENST00000414485 327 ntBASIC4.65□□□□□ -1.67
GRIN3BO60391 AC243428.1-201ENST00000421099 264 ntBASIC4.65□□□□□ -1.67
GRIN3BO60391 AC245052.1-201ENST00000426213 410 ntTSL 3 BASIC4.65□□□□□ -1.67
GRIN3BO60391 AC007566.1-201ENST00000427458 643 ntTSL 5 BASIC4.65□□□□□ -1.67
GRIN3BO60391 AC079780.1-201ENST00000428259 207 ntBASIC4.65□□□□□ -1.67
GRIN3BO60391 HMGB1P9-201ENST00000429856 646 ntBASIC4.65□□□□□ -1.67
GRIN3BO60391 AC097662.1-205ENST00000433324 241 ntTSL 5 BASIC4.65□□□□□ -1.67
GRIN3BO60391 RPS24P13-201ENST00000442520 397 ntBASIC4.65□□□□□ -1.67
GRIN3BO60391 GSTA11P-201ENST00000452866 669 ntBASIC4.65□□□□□ -1.67
GRIN3BO60391 AC092451.1-201ENST00000480211 153 ntBASIC4.65□□□□□ -1.67
GRIN3BO60391 MLLT10P2-201ENST00000506434 249 ntBASIC4.65□□□□□ -1.67
GRIN3BO60391 RNU6-388P-201ENST00000517012 105 ntBASIC4.65□□□□□ -1.67
GRIN3BO60391 RNU6-389P-201ENST00000517048 105 ntBASIC4.65□□□□□ -1.67
GRIN3BO60391 SNORA31.20-201ENST00000517111 133 ntBASIC4.65□□□□□ -1.67
GRIN3BO60391 SNORD116.3-201ENST00000517176 78 ntBASIC4.65□□□□□ -1.67
GRIN3BO60391 RNU6-1315P-201ENST00000517187 99 ntBASIC4.65□□□□□ -1.67
GRIN3BO60391 AC011933.3-201ENST00000578226 372 ntTSL 1 (best) BASIC4.65□□□□□ -1.67
GRIN3BO60391 MIR1273C-201ENST00000578669 77 ntBASIC4.65□□□□□ -1.67
GRIN3BO60391 RNU6-85P-201ENST00000605989 107 ntBASIC4.65□□□□□ -1.67
GRIN3BO60391 AC013412.1-201ENST00000610687 192 ntBASIC4.65□□□□□ -1.67
GRIN3BO60391 Z69720.2-201ENST00000624755 279 ntBASIC4.65□□□□□ -1.67
GRIN3BO60391 SLC38A2-209ENST00000551374 2802 ntTSL 2 BASIC4.65□□□□□ -1.67
GRIN3BO60391 AC093908.1-201ENST00000623125 8092 ntBASIC4.65□□□□□ -1.67
GRIN3BO60391 RBM39-201ENST00000253363 2488 ntAPPRIS P4 TSL 1 (best) BASIC4.65□□□□□ -1.67
GRIN3BO60391 ELAVL2-204ENST00000397312 3805 ntAPPRIS P3 TSL 1 (best) BASIC4.65□□□□□ -1.67
GRIN3BO60391 SCN1A-202ENST00000375405 8097 ntAPPRIS P3 TSL 5 BASIC4.65□□□□□ -1.67
GRIN3BO60391 CLCA2-201ENST00000370565 4025 ntAPPRIS P1 TSL 1 (best) BASIC4.64□□□□□ -1.67
GRIN3BO60391 PKHD1-202ENST00000371117 16282 ntAPPRIS P4 TSL 1 (best) BASIC4.64□□□□□ -1.67
GRIN3BO60391 ASAH2-201ENST00000329428 2184 ntTSL 1 (best) BASIC4.64□□□□□ -1.67
GRIN3BO60391 TJP1-204ENST00000400011 6764 ntAPPRIS ALT2 TSL 1 (best) BASIC4.64□□□□□ -1.67
GRIN3BO60391 AC019117.3-201ENST00000637807 3523 ntAPPRIS P1 TSL 5 BASIC4.64□□□□□ -1.67
GRIN3BO60391 TRIM36-201ENST00000282369 4050 ntAPPRIS P1 TSL 1 (best) BASIC4.64□□□□□ -1.67
GRIN3BO60391 Y_RNA.2-201ENST00000362330 96 ntBASIC4.64□□□□□ -1.67
GRIN3BO60391 RNU6-596P-201ENST00000365395 98 ntBASIC4.64□□□□□ -1.67
GRIN3BO60391 RNU6-1062P-201ENST00000383908 107 ntBASIC4.64□□□□□ -1.67
GRIN3BO60391 RNU6-842P-201ENST00000384269 107 ntBASIC4.64□□□□□ -1.67
GRIN3BO60391 SNORA19-201ENST00000384737 128 ntBASIC4.64□□□□□ -1.67
GRIN3BO60391 MIR517A-201ENST00000385001 87 ntBASIC4.64□□□□□ -1.67
GRIN3BO60391 MS4A4E-201ENST00000398984 479 ntTSL 5 BASIC4.64□□□□□ -1.67
GRIN3BO60391 MTCO2P33-201ENST00000402100 465 ntBASIC4.64□□□□□ -1.67
GRIN3BO60391 LAP3P1-201ENST00000403648 294 ntBASIC4.64□□□□□ -1.67
GRIN3BO60391 RNU2-64P-201ENST00000411315 191 ntBASIC4.64□□□□□ -1.67
GRIN3BO60391 HMGB3P2-201ENST00000411913 584 ntBASIC4.64□□□□□ -1.67
GRIN3BO60391 AL592045.1-201ENST00000429867 352 ntBASIC4.64□□□□□ -1.67
GRIN3BO60391 AL157937.1-201ENST00000435092 443 ntTSL 3 BASIC4.64□□□□□ -1.67
GRIN3BO60391 AC011816.1-201ENST00000441346 546 ntBASIC4.64□□□□□ -1.67
GRIN3BO60391 IKZF2-209ENST00000442445 551 ntTSL 5 BASIC4.64□□□□□ -1.67
GRIN3BO60391 HMGB3P17-201ENST00000504195 649 ntBASIC4.64□□□□□ -1.67
GRIN3BO60391 AC110767.1-201ENST00000508374 239 ntTSL 3 BASIC4.64□□□□□ -1.67
GRIN3BO60391 RNU6-475P-201ENST00000516073 104 ntBASIC4.64□□□□□ -1.67
GRIN3BO60391 RNU6-143P-201ENST00000516942 93 ntBASIC4.64□□□□□ -1.67
GRIN3BO60391 IGKV2-38-201ENST00000517443 247 ntBASIC4.64□□□□□ -1.67
GRIN3BO60391 AC090568.2-205ENST00000518631 576 ntTSL 4 BASIC4.64□□□□□ -1.67
GRIN3BO60391 AC022690.2-201ENST00000525673 589 ntTSL 3 BASIC4.64□□□□□ -1.67
GRIN3BO60391 AC027288.1-203ENST00000552167 567 ntTSL 4 BASIC4.64□□□□□ -1.67
GRIN3BO60391 AL512791.1-201ENST00000555853 300 ntTSL 3 BASIC4.64□□□□□ -1.67
Retrieved 100 of 98,524 protein–RNA pairs in 109.3 ms