Protein–RNA interactions for Protein: O60294

LCMT2, tRNA wybutosine-synthesizing protein 4, humanhuman

Known RBP Predictions only

Length 686 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LCMT2O60294 Vault.3-201ENST00000516676 95 ntBASIC2.39□□□□□ -2.03
LCMT2O60294 LINC00824-201ENST00000517583 805 ntTSL 5 BASIC2.39□□□□□ -2.03
LCMT2O60294 UTP23-205ENST00000520733 369 ntTSL 3 BASIC2.39□□□□□ -2.03
LCMT2O60294 PSMA4-204ENST00000558094 651 ntTSL 3 BASIC2.39□□□□□ -2.03
LCMT2O60294 AC234778.2-201ENST00000566241 354 ntBASIC2.39□□□□□ -2.03
LCMT2O60294 AC007151.1-201ENST00000572774 483 ntBASIC2.39□□□□□ -2.03
LCMT2O60294 AC024619.4-201ENST00000580924 316 ntBASIC2.39□□□□□ -2.03
LCMT2O60294 MIR5092-201ENST00000583139 88 ntBASIC2.39□□□□□ -2.03
LCMT2O60294 PIGPP4-201ENST00000584447 307 ntBASIC2.39□□□□□ -2.03
LCMT2O60294 RSL24D1P11-201ENST00000591045 491 ntBASIC2.39□□□□□ -2.03
LCMT2O60294 AC107294.1-201ENST00000609524 467 ntBASIC2.39□□□□□ -2.03
LCMT2O60294 AC104237.2-201ENST00000612456 443 ntBASIC2.39□□□□□ -2.03
LCMT2O60294 HMGB1P24-202ENST00000615653 685 ntBASIC2.39□□□□□ -2.03
LCMT2O60294 TEX9-207ENST00000560582 2005 ntTSL 3 BASIC2.39□□□□□ -2.03
LCMT2O60294 EBAG9-210ENST00000620557 2186 ntAPPRIS P1 TSL 3 BASIC2.39□□□□□ -2.03
LCMT2O60294 RPAP3-202ENST00000380650 2149 ntTSL 1 (best) BASIC2.38□□□□□ -2.03
LCMT2O60294 SAMD9L-201ENST00000318238 7134 ntAPPRIS P1 TSL 1 (best) BASIC2.38□□□□□ -2.03
LCMT2O60294 DEFB114-201ENST00000322066 253 ntAPPRIS P1 TSL 1 (best) BASIC2.38□□□□□ -2.03
LCMT2O60294 RNA5SP393-201ENST00000363423 117 ntBASIC2.38□□□□□ -2.03
LCMT2O60294 RNA5SP456-201ENST00000364002 114 ntBASIC2.38□□□□□ -2.03
LCMT2O60294 RNU1-138P-201ENST00000384093 164 ntBASIC2.38□□□□□ -2.03
LCMT2O60294 Y_RNA.534-201ENST00000384599 112 ntBASIC2.38□□□□□ -2.03
LCMT2O60294 MIR518C-201ENST00000384822 101 ntBASIC2.38□□□□□ -2.03
LCMT2O60294 TRAJ40-201ENST00000390497 61 ntAPPRIS P1 BASIC2.38□□□□□ -2.03
LCMT2O60294 AL390237.1-201ENST00000404226 1415 ntBASIC2.38□□□□□ -2.03
LCMT2O60294 SNORA11.2-201ENST00000408318 127 ntBASIC2.38□□□□□ -2.03
LCMT2O60294 MTND3P17-201ENST00000416968 344 ntBASIC2.38□□□□□ -2.03
LCMT2O60294 LINC01780-201ENST00000420059 442 ntTSL 2 BASIC2.38□□□□□ -2.03
LCMT2O60294 CCDC82-202ENST00000423339 1878 ntAPPRIS P2 TSL 1 (best) BASIC2.38□□□□□ -2.03
LCMT2O60294 AC005062.1-206ENST00000424516 710 ntTSL 3 BASIC2.38□□□□□ -2.03
LCMT2O60294 AC236972.1-201ENST00000433225 199 ntBASIC2.38□□□□□ -2.03
LCMT2O60294 AL591212.2-201ENST00000433923 257 ntBASIC2.38□□□□□ -2.03
LCMT2O60294 RPS24P1-201ENST00000438550 371 ntBASIC2.38□□□□□ -2.03
LCMT2O60294 KRTAP19-11P-201ENST00000439851 104 ntBASIC2.38□□□□□ -2.03
LCMT2O60294 AL358075.2-201ENST00000452785 339 ntTSL 2 BASIC2.38□□□□□ -2.03
LCMT2O60294 AC233279.1-201ENST00000455300 423 ntBASIC2.38□□□□□ -2.03
LCMT2O60294 AL133481.3-201ENST00000456546 333 ntTSL 3 BASIC2.38□□□□□ -2.03
LCMT2O60294 AC093899.1-201ENST00000457984 376 ntBASIC2.38□□□□□ -2.03
LCMT2O60294 RPL31P3-201ENST00000458430 332 ntBASIC2.38□□□□□ -2.03
LCMT2O60294 AP000852.1-201ENST00000472460 573 ntBASIC2.38□□□□□ -2.03
LCMT2O60294 UBE2DNL-203ENST00000474922 222 ntBASIC2.38□□□□□ -2.03
LCMT2O60294 ARL2BPP4-201ENST00000506854 471 ntBASIC2.38□□□□□ -2.03
LCMT2O60294 AL136537.1-201ENST00000508199 538 ntTSL 3 BASIC2.38□□□□□ -2.03
LCMT2O60294 RPS3A-208ENST00000509736 576 ntTSL 2 BASIC2.38□□□□□ -2.03
LCMT2O60294 LINC02494-201ENST00000509824 427 ntTSL 3 BASIC2.38□□□□□ -2.03
LCMT2O60294 AC109927.1-202ENST00000511951 282 ntTSL 3 BASIC2.38□□□□□ -2.03
LCMT2O60294 Y_RNA.689-201ENST00000516589 107 ntBASIC2.38□□□□□ -2.03
LCMT2O60294 AC090572.1-201ENST00000519251 160 ntBASIC2.38□□□□□ -2.03
LCMT2O60294 BTF3P12-201ENST00000519620 469 ntBASIC2.38□□□□□ -2.03
LCMT2O60294 AF117829.1-203ENST00000520306 421 ntTSL 5 BASIC2.38□□□□□ -2.03
LCMT2O60294 SPINK7-205ENST00000523535 299 ntTSL 2 BASIC2.38□□□□□ -2.03
LCMT2O60294 AC087260.1-201ENST00000546118 401 ntTSL 5 BASIC2.38□□□□□ -2.03
LCMT2O60294 ZNF280D-204ENST00000558320 3666 ntTSL 1 (best) BASIC2.38□□□□□ -2.03
LCMT2O60294 AC023824.2-201ENST00000566185 400 ntBASIC2.38□□□□□ -2.03
LCMT2O60294 AC006362.1-201ENST00000567392 174 ntBASIC2.38□□□□□ -2.03
LCMT2O60294 MIR4528-201ENST00000577763 90 ntBASIC2.38□□□□□ -2.03
LCMT2O60294 AC069061.2-202ENST00000580280 357 ntTSL 3 BASIC2.38□□□□□ -2.03
LCMT2O60294 MIR3682-201ENST00000581338 84 ntBASIC2.38□□□□□ -2.03
LCMT2O60294 AL121992.2-201ENST00000606262 256 ntBASIC2.38□□□□□ -2.03
LCMT2O60294 AC022893.3-201ENST00000607665 437 ntBASIC2.38□□□□□ -2.03
LCMT2O60294 AC010678.1-201ENST00000614118 713 ntBASIC2.38□□□□□ -2.03
LCMT2O60294 Z99571.1-201ENST00000636677 394 ntBASIC2.38□□□□□ -2.03
LCMT2O60294 OR4C15-202ENST00000642128 951 ntAPPRIS P1 BASIC2.38□□□□□ -2.03
LCMT2O60294 RGPD1-204ENST00000559485 5247 ntAPPRIS P2 TSL 1 (best) BASIC2.38□□□□□ -2.03
LCMT2O60294 AL137003.2-201ENST00000606924 2538 ntBASIC2.38□□□□□ -2.03
LCMT2O60294 AL136360.1-201ENST00000503377 1900 ntBASIC2.38□□□□□ -2.03
LCMT2O60294 BCHE-201ENST00000264381 2454 ntAPPRIS P1 TSL 1 (best) BASIC2.37□□□□□ -2.03
LCMT2O60294 MTND4P27-201ENST00000450813 1354 ntBASIC2.37□□□□□ -2.03
LCMT2O60294 DDIAS-201ENST00000329143 3367 ntAPPRIS P2 TSL 1 (best) BASIC2.37□□□□□ -2.03
LCMT2O60294 SKIL-203ENST00000426052 2757 ntTSL 2 BASIC2.37□□□□□ -2.03
LCMT2O60294 MIR6073-201ENST00000352083 89 ntBASIC2.37□□□□□ -2.03
LCMT2O60294 U3.12-201ENST00000364498 214 ntBASIC2.37□□□□□ -2.03
LCMT2O60294 SNORA4.3-201ENST00000365564 137 ntBASIC2.37□□□□□ -2.03
LCMT2O60294 RNU6-1083P-201ENST00000384022 107 ntBASIC2.37□□□□□ -2.03
LCMT2O60294 RNA5SP181-201ENST00000410246 98 ntBASIC2.37□□□□□ -2.03
LCMT2O60294 RPL26P27-201ENST00000414397 437 ntBASIC2.37□□□□□ -2.03
LCMT2O60294 C1DP2-201ENST00000418167 426 ntBASIC2.37□□□□□ -2.03
LCMT2O60294 AC000123.1-201ENST00000418215 516 ntTSL 5 BASIC2.37□□□□□ -2.03
LCMT2O60294 CR769767.1-201ENST00000436337 346 ntBASIC2.37□□□□□ -2.03
LCMT2O60294 AL118523.1-201ENST00000444436 480 ntTSL 3 BASIC2.37□□□□□ -2.03
LCMT2O60294 LINC01038-201ENST00000457858 428 ntTSL 3 BASIC2.37□□□□□ -2.03
LCMT2O60294 RNU6-953P-201ENST00000459154 107 ntBASIC2.37□□□□□ -2.03
LCMT2O60294 FSBP-201ENST00000481490 1158 ntTSL 1 (best) BASIC2.37□□□□□ -2.03
LCMT2O60294 AC082650.1-201ENST00000503542 575 ntTSL 4 BASIC2.37□□□□□ -2.03
LCMT2O60294 AC023141.11-201ENST00000508864 202 ntBASIC2.37□□□□□ -2.03
LCMT2O60294 MTCO3P28-201ENST00000513351 515 ntBASIC2.37□□□□□ -2.03
LCMT2O60294 AC109329.2-201ENST00000519658 482 ntBASIC2.37□□□□□ -2.03
LCMT2O60294 RPL7P20-201ENST00000520308 745 ntBASIC2.37□□□□□ -2.03
LCMT2O60294 HOMER1-205ENST00000535690 642 ntTSL 1 (best) BASIC2.37□□□□□ -2.03
LCMT2O60294 AC090531.1-202ENST00000548450 499 ntTSL 3 BASIC2.37□□□□□ -2.03
LCMT2O60294 AC087883.1-201ENST00000551882 391 ntBASIC2.37□□□□□ -2.03
LCMT2O60294 AL352955.1-201ENST00000555490 332 ntTSL 3 BASIC2.37□□□□□ -2.03
LCMT2O60294 AC012213.3-201ENST00000577199 777 ntBASIC2.37□□□□□ -2.03
LCMT2O60294 MIR4672-201ENST00000583126 81 ntBASIC2.37□□□□□ -2.03
LCMT2O60294 AC060766.3-201ENST00000591442 263 ntBASIC2.37□□□□□ -2.03
LCMT2O60294 LINC01533-205ENST00000593056 607 ntTSL 3 BASIC2.37□□□□□ -2.03
LCMT2O60294 RNASEH2B-AS1-206ENST00000601286 657 ntTSL 5 BASIC2.37□□□□□ -2.03
LCMT2O60294 RN7SKP299-201ENST00000606679 301 ntBASIC2.37□□□□□ -2.03
LCMT2O60294 AC006566.1-201ENST00000608943 513 ntBASIC2.37□□□□□ -2.03
LCMT2O60294 AL589743.7-201ENST00000612637 233 ntBASIC2.37□□□□□ -2.03
Retrieved 100 of 98,524 protein–RNA pairs in 126.6 ms