Protein–RNA interactions for Protein: O43316

PAX4, Paired box protein Pax-4, humanhuman

Predictions only

Length 350 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PAX4O43316 TRIQK-206ENST00000518748 3563 ntAPPRIS P1 TSL 1 (best) BASIC3.81□□□□□ -1.8
PAX4O43316 RAD17-208ENST00000380774 2117 ntAPPRIS P1 TSL 1 (best) BASIC3.8□□□□□ -1.8
PAX4O43316 ZNF780B-202ENST00000434248 8665 ntAPPRIS P1 TSL 5 BASIC3.8□□□□□ -1.8
PAX4O43316 ZNF780B-207ENST00000617676 8664 ntAPPRIS P1 TSL 5 BASIC3.8□□□□□ -1.8
PAX4O43316 HNMT-202ENST00000280097 3295 ntAPPRIS P1 TSL 1 (best) BASIC3.8□□□□□ -1.8
PAX4O43316 PLCE1-202ENST00000371380 12024 ntAPPRIS P3 TSL 1 (best) BASIC3.8□□□□□ -1.8
PAX4O43316 GPX8-201ENST00000296734 3245 ntTSL 1 (best) BASIC3.8□□□□□ -1.8
PAX4O43316 UBXN7-201ENST00000296328 10568 ntAPPRIS P1 TSL 1 (best) BASIC3.8□□□□□ -1.8
PAX4O43316 POU2F1-206ENST00000429375 13651 ntAPPRIS ALT2 TSL 2 BASIC3.8□□□□□ -1.8
PAX4O43316 AC015813.1-202ENST00000577267 4056 ntTSL 2 BASIC3.8□□□□□ -1.8
PAX4O43316 CSRNP3-202ENST00000342316 11684 ntAPPRIS P1 TSL 1 (best) BASIC3.8□□□□□ -1.8
PAX4O43316 DLGAP5-202ENST00000395425 2954 ntAPPRIS ALT2 TSL 1 (best) BASIC3.8□□□□□ -1.8
PAX4O43316 PTK2-212ENST00000519419 4439 ntTSL 5 BASIC3.8□□□□□ -1.8
PAX4O43316 MAX-203ENST00000341653 330 ntTSL 2 BASIC3.8□□□□□ -1.8
PAX4O43316 AC092268.1-201ENST00000342691 405 ntBASIC3.8□□□□□ -1.8
PAX4O43316 AC004057.1-202ENST00000356247 284 ntTSL 3 BASIC3.8□□□□□ -1.8
PAX4O43316 Y_RNA.33-201ENST00000362591 102 ntBASIC3.8□□□□□ -1.8
PAX4O43316 RN7SKP224-201ENST00000364140 325 ntBASIC3.8□□□□□ -1.8
PAX4O43316 RNA5SP242-201ENST00000364171 118 ntBASIC3.8□□□□□ -1.8
PAX4O43316 SNORA72.4-201ENST00000384174 132 ntBASIC3.8□□□□□ -1.8
PAX4O43316 SNORA29-201ENST00000384183 140 ntBASIC3.8□□□□□ -1.8
PAX4O43316 RNU6-225P-201ENST00000384613 103 ntBASIC3.8□□□□□ -1.8
PAX4O43316 Y_RNA.544-201ENST00000384650 113 ntBASIC3.8□□□□□ -1.8
PAX4O43316 AL135786.1-201ENST00000415892 214 ntBASIC3.8□□□□□ -1.8
PAX4O43316 SRSF1P1-201ENST00000424058 520 ntBASIC3.8□□□□□ -1.8
PAX4O43316 LINC01496-201ENST00000448761 460 ntTSL 5 BASIC3.8□□□□□ -1.8
PAX4O43316 AC090804.1-201ENST00000448870 490 ntBASIC3.8□□□□□ -1.8
PAX4O43316 RN7SL174P-201ENST00000475578 289 ntBASIC3.8□□□□□ -1.8
PAX4O43316 AC010265.1-201ENST00000513509 211 ntBASIC3.8□□□□□ -1.8
PAX4O43316 RNA5SP367-201ENST00000516557 118 ntBASIC3.8□□□□□ -1.8
PAX4O43316 Y_RNA.690-201ENST00000516603 95 ntBASIC3.8□□□□□ -1.8
PAX4O43316 PCED1B-AS1-210ENST00000552975 378 ntTSL 2 BASIC3.8□□□□□ -1.8
PAX4O43316 AC051619.2-201ENST00000559063 397 ntBASIC3.8□□□□□ -1.8
PAX4O43316 AC105254.2-201ENST00000603636 436 ntBASIC3.8□□□□□ -1.8
PAX4O43316 AC005191.1-201ENST00000603950 358 ntBASIC3.8□□□□□ -1.8
PAX4O43316 PSG7-202ENST00000446844 2227 ntAPPRIS P5 TSL 5 BASIC3.8□□□□□ -1.8
PAX4O43316 ZBTB38-202ENST00000441582 3662 ntAPPRIS P1 TSL 2 BASIC3.8□□□□□ -1.8
PAX4O43316 DCTN4-201ENST00000424236 4054 ntTSL 2 BASIC3.8□□□□□ -1.8
PAX4O43316 EMSY-204ENST00000524490 4015 ntTSL 2 BASIC3.8□□□□□ -1.8
PAX4O43316 LINC02203-203ENST00000625989 1600 ntTSL 1 (best) BASIC3.8□□□□□ -1.8
PAX4O43316 SDCBP-213ENST00000630925 2076 ntTSL 5 BASIC3.8□□□□□ -1.8
PAX4O43316 VCAM1-202ENST00000347652 2812 ntTSL 1 (best) BASIC3.8□□□□□ -1.8
PAX4O43316 PTRH2-203ENST00000470557 4114 ntAPPRIS P3 BASIC3.8□□□□□ -1.8
PAX4O43316 CSDE1-202ENST00000339438 4006 ntTSL 1 (best) BASIC3.79□□□□□ -1.8
PAX4O43316 PPEF1-201ENST00000349874 2687 ntTSL 5 BASIC3.79□□□□□ -1.8
PAX4O43316 USP8-201ENST00000307179 4243 ntAPPRIS P1 TSL 1 (best) BASIC3.79□□□□□ -1.8
PAX4O43316 STIL-204ENST00000396221 4558 ntAPPRIS ALT2 TSL 1 (best) BASIC3.79□□□□□ -1.8
PAX4O43316 ZNF280B-201ENST00000613655 3714 ntAPPRIS P1 TSL 5 BASIC3.79□□□□□ -1.8
PAX4O43316 ZBTB21-201ENST00000310826 7449 ntAPPRIS P1 TSL 1 (best) BASIC3.79□□□□□ -1.8
PAX4O43316 XIST-204ENST00000429829 19275 ntTSL 1 (best) BASIC3.79□□□□□ -1.8
PAX4O43316 AL359693.1-201ENST00000614959 2407 ntBASIC3.79□□□□□ -1.8
PAX4O43316 MYBPC1-205ENST00000536007 3512 ntAPPRIS ALT2 TSL 1 (best) BASIC3.79□□□□□ -1.8
PAX4O43316 MYBPC1-206ENST00000541119 3533 ntAPPRIS ALT2 TSL 1 (best) BASIC3.79□□□□□ -1.8
PAX4O43316 R3HDM1-201ENST00000264160 4648 ntAPPRIS P3 TSL 1 (best) BASIC3.79□□□□□ -1.8
PAX4O43316 MLH3-210ENST00000556257 4229 ntTSL 5 BASIC3.79□□□□□ -1.8
PAX4O43316 RNU5A-1-201ENST00000362698 116 ntBASIC3.79□□□□□ -1.8
PAX4O43316 RNU6-647P-201ENST00000364243 107 ntBASIC3.79□□□□□ -1.8
PAX4O43316 RNA5SP125-201ENST00000364843 120 ntBASIC3.79□□□□□ -1.8
PAX4O43316 RNU6-1276P-201ENST00000365372 104 ntBASIC3.79□□□□□ -1.8
PAX4O43316 MIR105-1-201ENST00000385222 81 ntBASIC3.79□□□□□ -1.8
PAX4O43316 RPL21P67-201ENST00000402896 478 ntBASIC3.79□□□□□ -1.8
PAX4O43316 AL133388.1-201ENST00000404509 287 ntBASIC3.79□□□□□ -1.8
PAX4O43316 Y_RNA.622-201ENST00000411091 108 ntBASIC3.79□□□□□ -1.8
PAX4O43316 CYCSP6-201ENST00000434498 302 ntBASIC3.79□□□□□ -1.8
PAX4O43316 HMGB3P8-201ENST00000449709 577 ntBASIC3.79□□□□□ -1.8
PAX4O43316 AC068489.1-201ENST00000453706 261 ntTSL 5 BASIC3.79□□□□□ -1.8
PAX4O43316 BX546450.1-201ENST00000454307 482 ntTSL 2 BASIC3.79□□□□□ -1.8
PAX4O43316 RPL30P12-201ENST00000474666 353 ntBASIC3.79□□□□□ -1.8
PAX4O43316 RN7SL547P-201ENST00000490793 290 ntBASIC3.79□□□□□ -1.8
PAX4O43316 MYLK-AS2-201ENST00000510827 500 ntTSL 3 BASIC3.79□□□□□ -1.8
PAX4O43316 BX510359.5-201ENST00000515651 304 ntBASIC3.79□□□□□ -1.8
PAX4O43316 RNU6-377P-201ENST00000515965 102 ntBASIC3.79□□□□□ -1.8
PAX4O43316 AP001999.2-201ENST00000529417 389 ntTSL 3 BASIC3.79□□□□□ -1.8
PAX4O43316 RN7SL356P-201ENST00000582228 248 ntBASIC3.79□□□□□ -1.8
PAX4O43316 AC022098.3-201ENST00000590715 315 ntTSL 3 BASIC3.79□□□□□ -1.8
PAX4O43316 AC011445.2-201ENST00000599274 173 ntBASIC3.79□□□□□ -1.8
PAX4O43316 AP000769.2-201ENST00000602344 396 ntBASIC3.79□□□□□ -1.8
PAX4O43316 AC000068.2-201ENST00000608816 460 ntBASIC3.79□□□□□ -1.8
PAX4O43316 MIR4302-201ENST00000638058 60 ntBASIC3.79□□□□□ -1.8
PAX4O43316 PSMD5-AS1-215ENST00000640622 205 ntBASIC3.79□□□□□ -1.8
PAX4O43316 AC092821.1-201ENST00000640129 4180 ntAPPRIS P1 TSL 5 BASIC3.79□□□□□ -1.8
PAX4O43316 STEAP2-203ENST00000394622 6612 ntAPPRIS P1 TSL 1 (best) BASIC3.79□□□□□ -1.8
PAX4O43316 HMMR-203ENST00000393915 3102 ntAPPRIS ALT2 TSL 1 (best) BASIC3.79□□□□□ -1.8
PAX4O43316 AL158835.1-203ENST00000415305 3149 ntTSL 1 (best) BASIC3.79□□□□□ -1.8
PAX4O43316 ZNF285-205ENST00000614994 6012 ntAPPRIS P3 TSL 1 (best) BASIC3.79□□□□□ -1.8
PAX4O43316 NCOA1-201ENST00000288599 6952 ntAPPRIS ALT2 TSL 1 (best) BASIC3.79□□□□□ -1.8
PAX4O43316 LINC01189-201ENST00000428440 3321 ntTSL 2 BASIC3.78□□□□□ -1.8
PAX4O43316 EIF2AK3-203ENST00000419748 4222 ntTSL 1 (best) BASIC3.78□□□□□ -1.8
PAX4O43316 KIAA0408-204ENST00000483725 3284 ntAPPRIS P2 TSL 5 BASIC3.78□□□□□ -1.8
PAX4O43316 SYNE2-203ENST00000357395 21555 ntTSL 5 BASIC3.78□□□□□ -1.8
PAX4O43316 LINC02355-201ENST00000503100 2520 ntTSL 1 (best) BASIC3.78□□□□□ -1.8
PAX4O43316 KMO-203ENST00000366558 1868 ntAPPRIS ALT2 TSL 1 (best) BASIC3.78□□□□□ -1.8
PAX4O43316 CASC1-202ENST00000354189 2445 ntAPPRIS ALT2 TSL 1 (best) BASIC3.78□□□□□ -1.8
PAX4O43316 EHBP1-202ENST00000405015 4108 ntAPPRIS ALT2 TSL 2 BASIC3.78□□□□□ -1.8
PAX4O43316 RN7SKP153-201ENST00000365026 316 ntBASIC3.78□□□□□ -1.8
PAX4O43316 SNORA16A-201ENST00000384342 137 ntBASIC3.78□□□□□ -1.8
PAX4O43316 MIR10A-201ENST00000385043 110 ntBASIC3.78□□□□□ -1.8
PAX4O43316 RNU6-1228P-201ENST00000391014 107 ntBASIC3.78□□□□□ -1.8
PAX4O43316 MIR1263-201ENST00000408324 86 ntBASIC3.78□□□□□ -1.8
PAX4O43316 RNA5SP487-201ENST00000410186 122 ntBASIC3.78□□□□□ -1.8
Retrieved 100 of 98,524 protein–RNA pairs in 100.6 ms