Protein–RNA interactions for Protein: A6NKD9

CCDC85C, Coiled-coil domain-containing protein 85C, humanhuman

Predictions only

Length 419 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC85CA6NKD9 HTN3-202ENST00000526767 578 ntAPPRIS P2 TSL 1 (best) BASIC4.27□□□□□ -1.73
CCDC85CA6NKD9 AP001825.1-201ENST00000534275 351 ntTSL 2 BASIC4.27□□□□□ -1.73
CCDC85CA6NKD9 LINC02442-202ENST00000540761 382 ntTSL 2 BASIC4.27□□□□□ -1.73
CCDC85CA6NKD9 AP003174.2-201ENST00000544663 294 ntTSL 3 BASIC4.27□□□□□ -1.73
CCDC85CA6NKD9 AL163153.1-201ENST00000554223 283 ntBASIC4.27□□□□□ -1.73
CCDC85CA6NKD9 MIR5680-201ENST00000577577 84 ntBASIC4.27□□□□□ -1.73
CCDC85CA6NKD9 AC087749.2-201ENST00000583910 352 ntTSL 5 BASIC4.27□□□□□ -1.73
CCDC85CA6NKD9 ELOCP5-201ENST00000604924 333 ntBASIC4.27□□□□□ -1.73
CCDC85CA6NKD9 AC123912.5-201ENST00000605470 343 ntBASIC4.27□□□□□ -1.73
CCDC85CA6NKD9 AC068544.1-201ENST00000635064 248 ntTSL 5 BASIC4.27□□□□□ -1.73
CCDC85CA6NKD9 DTWD2-201ENST00000304058 4365 ntTSL 1 (best) BASIC4.27□□□□□ -1.73
CCDC85CA6NKD9 LINC01689-201ENST00000416218 2007 ntTSL 1 (best) BASIC4.27□□□□□ -1.73
CCDC85CA6NKD9 MS4A14-201ENST00000300187 2997 ntAPPRIS P3 TSL 1 (best) BASIC4.27□□□□□ -1.73
CCDC85CA6NKD9 RIF1-203ENST00000428287 7722 ntAPPRIS ALT2 TSL 1 (best) BASIC4.27□□□□□ -1.73
CCDC85CA6NKD9 CASP1-210ENST00000528974 1402 ntTSL 2 BASIC4.27□□□□□ -1.73
CCDC85CA6NKD9 RAB3C-201ENST00000282878 8896 ntAPPRIS P1 TSL 1 (best) BASIC4.27□□□□□ -1.73
CCDC85CA6NKD9 AF117829.1-206ENST00000621883 3802 ntBASIC4.27□□□□□ -1.73
CCDC85CA6NKD9 LINC02458-201ENST00000500381 2941 ntTSL 2 BASIC4.26□□□□□ -1.73
CCDC85CA6NKD9 ZNF107-203ENST00000395391 6094 ntTSL 1 (best) BASIC4.26□□□□□ -1.73
CCDC85CA6NKD9 ZFYVE16-201ENST00000338008 6773 ntAPPRIS P1 TSL 1 (best) BASIC4.26□□□□□ -1.73
CCDC85CA6NKD9 SYTL2-203ENST00000359152 4123 ntAPPRIS ALT1 TSL 1 (best) BASIC4.26□□□□□ -1.73
CCDC85CA6NKD9 DEUP1-201ENST00000298050 2664 ntAPPRIS P1 TSL 5 BASIC4.26□□□□□ -1.73
CCDC85CA6NKD9 MBNL1-211ENST00000463374 5092 ntAPPRIS P4 TSL 1 (best) BASIC4.26□□□□□ -1.73
CCDC85CA6NKD9 MACC1-201ENST00000332878 2994 ntAPPRIS P1 TSL 1 (best) BASIC4.26□□□□□ -1.73
CCDC85CA6NKD9 RNU6-1227P-201ENST00000383981 107 ntBASIC4.26□□□□□ -1.73
CCDC85CA6NKD9 Y_RNA.419-201ENST00000384041 102 ntBASIC4.26□□□□□ -1.73
CCDC85CA6NKD9 MIR10A-201ENST00000385043 110 ntBASIC4.26□□□□□ -1.73
CCDC85CA6NKD9 RNU6-370P-201ENST00000411008 104 ntBASIC4.26□□□□□ -1.73
CCDC85CA6NKD9 RPS15AP6-201ENST00000420703 385 ntBASIC4.26□□□□□ -1.73
CCDC85CA6NKD9 AC010891.1-201ENST00000449963 448 ntTSL 2 BASIC4.26□□□□□ -1.73
CCDC85CA6NKD9 HMGB3P22-202ENST00000451823 572 ntBASIC4.26□□□□□ -1.73
CCDC85CA6NKD9 AC114501.3-201ENST00000453648 164 ntTSL 5 BASIC4.26□□□□□ -1.73
CCDC85CA6NKD9 AC022795.1-201ENST00000473808 480 ntBASIC4.26□□□□□ -1.73
CCDC85CA6NKD9 AC093523.1-201ENST00000503268 499 ntTSL 3 BASIC4.26□□□□□ -1.73
CCDC85CA6NKD9 LINC02230-201ENST00000511174 301 ntTSL 5 BASIC4.26□□□□□ -1.73
CCDC85CA6NKD9 RNU7-143P-201ENST00000516781 65 ntBASIC4.26□□□□□ -1.73
CCDC85CA6NKD9 APOOP3-201ENST00000536787 586 ntBASIC4.26□□□□□ -1.73
CCDC85CA6NKD9 AL133279.1-202ENST00000556789 456 ntTSL 5 BASIC4.26□□□□□ -1.73
CCDC85CA6NKD9 MIR3609-201ENST00000582661 80 ntBASIC4.26□□□□□ -1.73
CCDC85CA6NKD9 MIR8069-1-201ENST00000616627 86 ntBASIC4.26□□□□□ -1.73
CCDC85CA6NKD9 MIR6076-201ENST00000617521 113 ntBASIC4.26□□□□□ -1.73
CCDC85CA6NKD9 HIKESHI-208ENST00000618164 499 ntTSL 5 BASIC4.26□□□□□ -1.73
CCDC85CA6NKD9 SMAD5-AS1_1.1-201ENST00000619886 266 ntBASIC4.26□□□□□ -1.73
CCDC85CA6NKD9 MIR8069-2-201ENST00000621412 86 ntBASIC4.26□□□□□ -1.73
CCDC85CA6NKD9 DLD-214ENST00000639772 421 ntTSL 5 BASIC4.26□□□□□ -1.73
CCDC85CA6NKD9 PIGN-229ENST00000638936 4233 ntAPPRIS P1 TSL 5 BASIC4.26□□□□□ -1.73
CCDC85CA6NKD9 GDAP2-202ENST00000369443 8828 ntAPPRIS P1 TSL 2 BASIC4.26□□□□□ -1.73
CCDC85CA6NKD9 SNORD62.1-201ENST00000362541 86 ntBASIC4.25□□□□□ -1.73
CCDC85CA6NKD9 RNU6-1188P-201ENST00000363795 107 ntBASIC4.25□□□□□ -1.73
CCDC85CA6NKD9 RNU6-270P-201ENST00000364131 105 ntBASIC4.25□□□□□ -1.73
CCDC85CA6NKD9 RNA5SP151-201ENST00000365632 117 ntBASIC4.25□□□□□ -1.73
CCDC85CA6NKD9 RNU1-73P-201ENST00000383971 164 ntBASIC4.25□□□□□ -1.73
CCDC85CA6NKD9 RNU6-601P-201ENST00000384540 107 ntBASIC4.25□□□□□ -1.73
CCDC85CA6NKD9 MIR34A-201ENST00000385130 110 ntBASIC4.25□□□□□ -1.73
CCDC85CA6NKD9 AL356057.2-201ENST00000403318 432 ntBASIC4.25□□□□□ -1.73
CCDC85CA6NKD9 MIR1302-11-201ENST00000408051 138 ntBASIC4.25□□□□□ -1.73
CCDC85CA6NKD9 MIR1302-9-201ENST00000408365 138 ntBASIC4.25□□□□□ -1.73
CCDC85CA6NKD9 MIR1302-10-201ENST00000408734 138 ntBASIC4.25□□□□□ -1.73
CCDC85CA6NKD9 RNA5SP247-201ENST00000411181 105 ntBASIC4.25□□□□□ -1.73
CCDC85CA6NKD9 RNU6-293P-201ENST00000411259 106 ntBASIC4.25□□□□□ -1.73
CCDC85CA6NKD9 AC245054.2-201ENST00000415639 319 ntBASIC4.25□□□□□ -1.73
CCDC85CA6NKD9 AC007560.1-201ENST00000426912 237 ntBASIC4.25□□□□□ -1.73
CCDC85CA6NKD9 MTCYBP6-201ENST00000441810 138 ntBASIC4.25□□□□□ -1.73
CCDC85CA6NKD9 AL590664.1-201ENST00000448065 339 ntBASIC4.25□□□□□ -1.73
CCDC85CA6NKD9 UBL5P3-201ENST00000475112 231 ntBASIC4.25□□□□□ -1.73
CCDC85CA6NKD9 AC090281.1-201ENST00000523019 276 ntBASIC4.25□□□□□ -1.73
CCDC85CA6NKD9 TMCO5B-203ENST00000529623 509 ntTSL 4 BASIC4.25□□□□□ -1.73
CCDC85CA6NKD9 H3F3AP1-201ENST00000559984 334 ntBASIC4.25□□□□□ -1.73
CCDC85CA6NKD9 CYCSP39-201ENST00000565821 309 ntBASIC4.25□□□□□ -1.73
CCDC85CA6NKD9 LINC01900-203ENST00000585185 393 ntTSL 3 BASIC4.25□□□□□ -1.73
CCDC85CA6NKD9 MIR1302-2-201ENST00000607096 138 ntBASIC4.25□□□□□ -1.73
CCDC85CA6NKD9 AC007742.2-201ENST00000618226 398 ntBASIC4.25□□□□□ -1.73
CCDC85CA6NKD9 LIMA1-214ENST00000552783 3612 ntAPPRIS ALT2 TSL 1 (best) BASIC4.25□□□□□ -1.73
CCDC85CA6NKD9 AC008725.1-201ENST00000605123 2263 ntBASIC4.25□□□□□ -1.73
CCDC85CA6NKD9 AL136164.4-201ENST00000625013 2135 ntBASIC4.25□□□□□ -1.73
CCDC85CA6NKD9 MCF2-201ENST00000338585 2826 ntAPPRIS ALT2 TSL 1 (best) BASIC4.25□□□□□ -1.73
CCDC85CA6NKD9 IL33-203ENST00000456383 2501 ntTSL 5 BASIC4.25□□□□□ -1.73
CCDC85CA6NKD9 ZNF208-207ENST00000609966 3653 ntTSL 5 BASIC4.25□□□□□ -1.73
CCDC85CA6NKD9 SLC6A15-203ENST00000450363 4229 ntTSL 1 (best) BASIC4.25□□□□□ -1.73
CCDC85CA6NKD9 RAD17-203ENST00000345306 2789 ntTSL 1 (best) BASIC4.25□□□□□ -1.73
CCDC85CA6NKD9 TPTE2-205ENST00000400230 1793 ntAPPRIS P1 TSL 5 BASIC4.25□□□□□ -1.73
CCDC85CA6NKD9 SEC31A-201ENST00000264405 3447 ntTSL 2 BASIC4.24□□□□□ -1.73
CCDC85CA6NKD9 ZNF254-202ENST00000357002 3967 ntAPPRIS P1 TSL 1 (best) BASIC4.24□□□□□ -1.73
CCDC85CA6NKD9 USP44-201ENST00000258499 4022 ntAPPRIS P1 TSL 1 (best) BASIC4.24□□□□□ -1.73
CCDC85CA6NKD9 LINC01592-202ENST00000518540 2367 ntTSL 2 BASIC4.24□□□□□ -1.73
CCDC85CA6NKD9 MT-ND5-201ENST00000361567 1812 ntAPPRIS P1 BASIC4.24□□□□□ -1.73
CCDC85CA6NKD9 ASB5-201ENST00000296525 3031 ntAPPRIS P1 TSL 1 (best) BASIC4.24□□□□□ -1.73
CCDC85CA6NKD9 CLEC7A-202ENST00000304084 1130 ntAPPRIS ALT1 TSL 1 (best) BASIC4.24□□□□□ -1.73
CCDC85CA6NKD9 SNORD9-201ENST00000362566 104 ntBASIC4.24□□□□□ -1.73
CCDC85CA6NKD9 Y_RNA.238-201ENST00000364441 102 ntBASIC4.24□□□□□ -1.73
CCDC85CA6NKD9 Y_RNA.394-201ENST00000383942 103 ntBASIC4.24□□□□□ -1.73
CCDC85CA6NKD9 AP000567.1-201ENST00000406413 156 ntBASIC4.24□□□□□ -1.73
CCDC85CA6NKD9 NDUFS5P4-201ENST00000412983 318 ntBASIC4.24□□□□□ -1.73
CCDC85CA6NKD9 SNORD56-201ENST00000413522 71 ntBASIC4.24□□□□□ -1.73
CCDC85CA6NKD9 HMGN2P30-201ENST00000423237 256 ntBASIC4.24□□□□□ -1.73
CCDC85CA6NKD9 GYPB-201ENST00000429670 239 ntTSL 1 (best) BASIC4.24□□□□□ -1.73
CCDC85CA6NKD9 HCG2040054-201ENST00000435331 434 ntTSL 3 BASIC4.24□□□□□ -1.73
CCDC85CA6NKD9 SNRPEP4-201ENST00000435815 279 ntBASIC4.24□□□□□ -1.73
CCDC85CA6NKD9 AC006028.1-201ENST00000438379 402 ntBASIC4.24□□□□□ -1.73
CCDC85CA6NKD9 HMGB3P8-201ENST00000449709 577 ntBASIC4.24□□□□□ -1.73
Retrieved 100 of 98,524 protein–RNA pairs in 105.9 ms