Protein–RNA interactions for Protein: A0A0B4J268

TRAV4, T-cell receptor alpha variable 4 (Fragment), humanhuman

Predictions only

Length 109 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRAV4A0A0B4J268 RNU6-707P-201ENST00000364647 95 ntBASIC1.09□□□□□ -2.23
TRAV4A0A0B4J268 RNU2-42P-201ENST00000410697 113 ntBASIC1.09□□□□□ -2.23
TRAV4A0A0B4J268 LINC01646-201ENST00000420522 682 ntTSL 3 BASIC1.09□□□□□ -2.23
TRAV4A0A0B4J268 SLC44A3-AS1-205ENST00000424505 612 ntBASIC1.09□□□□□ -2.23
TRAV4A0A0B4J268 AL513185.2-201ENST00000425543 193 ntBASIC1.09□□□□□ -2.23
TRAV4A0A0B4J268 AL445669.1-201ENST00000426743 755 ntBASIC1.09□□□□□ -2.23
TRAV4A0A0B4J268 MTCO1P3-201ENST00000429327 192 ntBASIC1.09□□□□□ -2.23
TRAV4A0A0B4J268 AMD1P1-201ENST00000457220 922 ntBASIC1.09□□□□□ -2.23
TRAV4A0A0B4J268 AC139453.3-201ENST00000493276 369 ntBASIC1.09□□□□□ -2.23
TRAV4A0A0B4J268 AC082650.1-201ENST00000503542 575 ntTSL 4 BASIC1.09□□□□□ -2.23
TRAV4A0A0B4J268 AC099520.1-202ENST00000503650 777 ntTSL 3 BASIC1.09□□□□□ -2.23
TRAV4A0A0B4J268 AC026414.1-201ENST00000504046 698 ntBASIC1.09□□□□□ -2.23
TRAV4A0A0B4J268 FAM92A1P2-202ENST00000504766 877 ntBASIC1.09□□□□□ -2.23
TRAV4A0A0B4J268 AC109927.2-201ENST00000506416 303 ntBASIC1.09□□□□□ -2.23
TRAV4A0A0B4J268 HMGB1P28-201ENST00000507778 552 ntBASIC1.09□□□□□ -2.23
TRAV4A0A0B4J268 RNU6-583P-201ENST00000516012 92 ntBASIC1.09□□□□□ -2.23
TRAV4A0A0B4J268 AF117829.1-204ENST00000519854 284 ntTSL 3 BASIC1.09□□□□□ -2.23
TRAV4A0A0B4J268 ASPH-224ENST00000522603 842 ntTSL 1 (best) BASIC1.09□□□□□ -2.23
TRAV4A0A0B4J268 AP005660.1-201ENST00000522972 293 ntBASIC1.09□□□□□ -2.23
TRAV4A0A0B4J268 AP005597.4-201ENST00000526762 229 ntBASIC1.09□□□□□ -2.23
TRAV4A0A0B4J268 TSPAN19-204ENST00000532498 998 ntAPPRIS P1 TSL 5 BASIC1.09□□□□□ -2.23
TRAV4A0A0B4J268 PDZD9-203ENST00000537222 1068 ntTSL 3 BASIC1.09□□□□□ -2.23
TRAV4A0A0B4J268 AC079907.1-201ENST00000552707 374 ntTSL 3 BASIC1.09□□□□□ -2.23
TRAV4A0A0B4J268 PSMA4-205ENST00000558281 773 ntTSL 3 BASIC1.09□□□□□ -2.23
TRAV4A0A0B4J268 RPL30P11-203ENST00000598995 310 ntBASIC1.09□□□□□ -2.23
TRAV4A0A0B4J268 CYP2C61P-201ENST00000604072 290 ntBASIC1.09□□□□□ -2.23
TRAV4A0A0B4J268 AC010900.2-201ENST00000604508 210 ntBASIC1.09□□□□□ -2.23
TRAV4A0A0B4J268 AL583856.2-201ENST00000606298 543 ntBASIC1.09□□□□□ -2.23
TRAV4A0A0B4J268 AC096772.1-201ENST00000609146 564 ntBASIC1.09□□□□□ -2.23
TRAV4A0A0B4J268 ZNF680P1-201ENST00000436625 1469 ntBASIC1.09□□□□□ -2.24
TRAV4A0A0B4J268 ATP11C-202ENST00000361648 6010 ntAPPRIS ALT2 TSL 1 (best) BASIC1.08□□□□□ -2.24
TRAV4A0A0B4J268 PMCH-201ENST00000329406 766 ntAPPRIS P1 TSL 1 (best) BASIC1.08□□□□□ -2.24
TRAV4A0A0B4J268 RNU6-512P-201ENST00000364438 103 ntBASIC1.08□□□□□ -2.24
TRAV4A0A0B4J268 MIR518D-201ENST00000385014 87 ntBASIC1.08□□□□□ -2.24
TRAV4A0A0B4J268 AL139397.2-201ENST00000404529 772 ntBASIC1.08□□□□□ -2.24
TRAV4A0A0B4J268 MIR1304-201ENST00000408243 91 ntBASIC1.08□□□□□ -2.24
TRAV4A0A0B4J268 AL159990.1-201ENST00000415119 337 ntTSL 3 BASIC1.08□□□□□ -2.24
TRAV4A0A0B4J268 AC104777.3-201ENST00000416350 545 ntTSL 3 BASIC1.08□□□□□ -2.24
TRAV4A0A0B4J268 RPL30P13-201ENST00000418873 348 ntBASIC1.08□□□□□ -2.24
TRAV4A0A0B4J268 AC133106.1-201ENST00000419029 397 ntTSL 3 BASIC1.08□□□□□ -2.24
TRAV4A0A0B4J268 AC016710.1-201ENST00000421326 466 ntTSL 3 BASIC1.08□□□□□ -2.24
TRAV4A0A0B4J268 AL159990.2-201ENST00000436491 337 ntTSL 3 BASIC1.08□□□□□ -2.24
TRAV4A0A0B4J268 AL354941.1-201ENST00000438600 464 ntBASIC1.08□□□□□ -2.24
TRAV4A0A0B4J268 MTATP6P30-201ENST00000443540 664 ntBASIC1.08□□□□□ -2.24
TRAV4A0A0B4J268 AC009299.3-202ENST00000445372 538 ntTSL 3 BASIC1.08□□□□□ -2.24
TRAV4A0A0B4J268 snoU13.26-201ENST00000459452 105 ntBASIC1.08□□□□□ -2.24
TRAV4A0A0B4J268 AC084117.1-201ENST00000496975 270 ntTSL 5 BASIC1.08□□□□□ -2.24
TRAV4A0A0B4J268 AC026780.2-201ENST00000503489 730 ntTSL 5 BASIC1.08□□□□□ -2.24
TRAV4A0A0B4J268 AP004607.1-201ENST00000524456 203 ntBASIC1.08□□□□□ -2.24
TRAV4A0A0B4J268 LINC02350-201ENST00000544419 480 ntTSL 3 BASIC1.08□□□□□ -2.24
TRAV4A0A0B4J268 AC093012.1-202ENST00000549403 582 ntBASIC1.08□□□□□ -2.24
TRAV4A0A0B4J268 AL135746.1-201ENST00000554205 547 ntTSL 3 BASIC1.08□□□□□ -2.24
TRAV4A0A0B4J268 MIR4422-201ENST00000581938 83 ntBASIC1.08□□□□□ -2.24
TRAV4A0A0B4J268 AL158827.2-201ENST00000602494 330 ntBASIC1.08□□□□□ -2.24
TRAV4A0A0B4J268 AP001485.1-201ENST00000604799 199 ntBASIC1.08□□□□□ -2.24
TRAV4A0A0B4J268 AC026741.1-201ENST00000605892 482 ntBASIC1.08□□□□□ -2.24
TRAV4A0A0B4J268 AC006355.2-201ENST00000629240 317 ntTSL 3 BASIC1.08□□□□□ -2.24
TRAV4A0A0B4J268 AL691447.3-201ENST00000635020 330 ntBASIC1.08□□□□□ -2.24
TRAV4A0A0B4J268 AP005901.5-201ENST00000545779 1796 ntBASIC1.08□□□□□ -2.24
TRAV4A0A0B4J268 MTND4P21-201ENST00000453886 1357 ntBASIC1.08□□□□□ -2.24
TRAV4A0A0B4J268 RMDN2-203ENST00000402091 1973 ntTSL 2 BASIC1.07□□□□□ -2.24
TRAV4A0A0B4J268 RNU1-62P-201ENST00000362599 164 ntBASIC1.07□□□□□ -2.24
TRAV4A0A0B4J268 RNU1-42P-201ENST00000364033 160 ntBASIC1.07□□□□□ -2.24
TRAV4A0A0B4J268 RNA5SP190-201ENST00000365222 118 ntBASIC1.07□□□□□ -2.24
TRAV4A0A0B4J268 DEFB125-201ENST00000382410 587 ntAPPRIS P1 TSL 1 (best) BASIC1.07□□□□□ -2.24
TRAV4A0A0B4J268 MIR150-201ENST00000385048 84 ntBASIC1.07□□□□□ -2.24
TRAV4A0A0B4J268 SNORA67.6-201ENST00000391093 99 ntBASIC1.07□□□□□ -2.24
TRAV4A0A0B4J268 AL158053.1-201ENST00000441503 453 ntBASIC1.07□□□□□ -2.24
TRAV4A0A0B4J268 AL590365.1-201ENST00000450788 243 ntBASIC1.07□□□□□ -2.24
TRAV4A0A0B4J268 AL034345.2-203ENST00000453417 383 ntTSL 3 BASIC1.07□□□□□ -2.24
TRAV4A0A0B4J268 AL356272.1-201ENST00000454538 832 ntTSL 2 BASIC1.07□□□□□ -2.24
TRAV4A0A0B4J268 AC010631.1-201ENST00000474150 156 ntBASIC1.07□□□□□ -2.24
TRAV4A0A0B4J268 AL365273.2-201ENST00000491114 492 ntAPPRIS P1 TSL 5 BASIC1.07□□□□□ -2.24
TRAV4A0A0B4J268 MTCYBP43-201ENST00000513621 740 ntBASIC1.07□□□□□ -2.24
TRAV4A0A0B4J268 RN7SKP258-201ENST00000517151 304 ntBASIC1.07□□□□□ -2.24
TRAV4A0A0B4J268 SNORA31.24-201ENST00000517232 57 ntBASIC1.07□□□□□ -2.24
TRAV4A0A0B4J268 AC007450.1-201ENST00000536492 188 ntTSL 3 BASIC1.07□□□□□ -2.24
TRAV4A0A0B4J268 AP000763.2-201ENST00000540641 163 ntBASIC1.07□□□□□ -2.24
TRAV4A0A0B4J268 AC084879.2-201ENST00000551656 369 ntTSL 3 BASIC1.07□□□□□ -2.24
TRAV4A0A0B4J268 AC027807.1-201ENST00000559921 996 ntBASIC1.07□□□□□ -2.24
TRAV4A0A0B4J268 SUB1P3-201ENST00000564581 315 ntBASIC1.07□□□□□ -2.24
TRAV4A0A0B4J268 AL670379.10-201ENST00000604330 253 ntBASIC1.07□□□□□ -2.24
TRAV4A0A0B4J268 AL670379.9-201ENST00000605428 253 ntBASIC1.07□□□□□ -2.24
TRAV4A0A0B4J268 AL022345.1-201ENST00000607292 135 ntBASIC1.07□□□□□ -2.24
TRAV4A0A0B4J268 AC097460.3-201ENST00000623099 442 ntBASIC1.07□□□□□ -2.24
TRAV4A0A0B4J268 AC091965.5-201ENST00000624785 342 ntBASIC1.07□□□□□ -2.24
TRAV4A0A0B4J268 PRPSAP2-229ENST00000628609 192 ntTSL 5 BASIC1.07□□□□□ -2.24
TRAV4A0A0B4J268 SKIL-204ENST00000458537 7182 ntAPPRIS P1 TSL 1 (best) BASIC1.07□□□□□ -2.24
TRAV4A0A0B4J268 MDM2-206ENST00000350057 1401 ntTSL 1 (best) BASIC1.06□□□□□ -2.24
TRAV4A0A0B4J268 JMJD1C-212ENST00000639129 7901 ntAPPRIS ALT2 TSL 5 BASIC1.06□□□□□ -2.24
TRAV4A0A0B4J268 ABCA5-201ENST00000392676 8220 ntAPPRIS P1 TSL 1 (best) BASIC1.06□□□□□ -2.24
TRAV4A0A0B4J268 DLEU2_6.3-201ENST00000340052 136 ntBASIC1.06□□□□□ -2.24
TRAV4A0A0B4J268 RNU6-661P-201ENST00000362409 107 ntBASIC1.06□□□□□ -2.24
TRAV4A0A0B4J268 RNU5B-1-201ENST00000363286 116 ntBASIC1.06□□□□□ -2.24
TRAV4A0A0B4J268 RNU6-611P-201ENST00000384276 104 ntBASIC1.06□□□□□ -2.24
TRAV4A0A0B4J268 SNORD14D-201ENST00000384390 87 ntBASIC1.06□□□□□ -2.24
TRAV4A0A0B4J268 MIR597-201ENST00000384968 97 ntBASIC1.06□□□□□ -2.24
TRAV4A0A0B4J268 MIR320A-201ENST00000385302 82 ntBASIC1.06□□□□□ -2.24
TRAV4A0A0B4J268 MIR1262-201ENST00000408276 93 ntBASIC1.06□□□□□ -2.24
TRAV4A0A0B4J268 RNU2-36P-201ENST00000410361 191 ntBASIC1.06□□□□□ -2.24
Retrieved 100 of 98,524 protein–RNA pairs in 107.7 ms