Protein–RNA interactions for Protein: Q9UPQ7

PDZRN3, E3 ubiquitin-protein ligase PDZRN3, humanhuman

Predictions only

Length 1,066 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PDZRN3Q9UPQ7 AC106785.1-201ENST00000565935 262 ntBASIC5.81□□□□□ -1.48
PDZRN3Q9UPQ7 AC055872.1-201ENST00000570978 278 ntBASIC5.81□□□□□ -1.48
PDZRN3Q9UPQ7 AP001180.2-201ENST00000579413 422 ntTSL 5 BASIC5.81□□□□□ -1.48
PDZRN3Q9UPQ7 AC090616.3-201ENST00000582184 217 ntBASIC5.81□□□□□ -1.48
PDZRN3Q9UPQ7 AC129510.2-201ENST00000582774 345 ntTSL 5 BASIC5.81□□□□□ -1.48
PDZRN3Q9UPQ7 AC023043.3-201ENST00000593113 385 ntBASIC5.81□□□□□ -1.48
PDZRN3Q9UPQ7 TTC28-AS1_2.1-201ENST00000611117 157 ntBASIC5.81□□□□□ -1.48
PDZRN3Q9UPQ7 AC099506.2-201ENST00000623074 221 ntBASIC5.81□□□□□ -1.48
PDZRN3Q9UPQ7 RMDN2-AS1-204ENST00000626669 448 ntTSL 5 BASIC5.81□□□□□ -1.48
PDZRN3Q9UPQ7 MYB-213ENST00000525369 2866 ntTSL 1 (best) BASIC5.81□□□□□ -1.48
PDZRN3Q9UPQ7 RLIM-201ENST00000332687 8317 ntAPPRIS P1 TSL 1 (best) BASIC5.81□□□□□ -1.48
PDZRN3Q9UPQ7 CFAP47-203ENST00000378653 9943 ntAPPRIS P2 TSL 5 BASIC5.81□□□□□ -1.48
PDZRN3Q9UPQ7 ZNF562-201ENST00000293648 12380 ntTSL 2 BASIC5.8□□□□□ -1.48
PDZRN3Q9UPQ7 ATF7IP-209ENST00000536444 8774 ntAPPRIS ALT2 TSL 1 (best) BASIC5.8□□□□□ -1.48
PDZRN3Q9UPQ7 GTDC1-202ENST00000344850 2607 ntAPPRIS P1 TSL 5 BASIC5.8□□□□□ -1.48
PDZRN3Q9UPQ7 PCDH9-201ENST00000377861 28227 ntTSL 1 (best) BASIC5.8□□□□□ -1.48
PDZRN3Q9UPQ7 NABP1-205ENST00000425611 1878 ntAPPRIS P1 TSL 1 (best) BASIC5.8□□□□□ -1.48
PDZRN3Q9UPQ7 MIR410-201ENST00000362222 80 ntBASIC5.8□□□□□ -1.48
PDZRN3Q9UPQ7 RNU6-989P-201ENST00000362756 107 ntBASIC5.8□□□□□ -1.48
PDZRN3Q9UPQ7 Y_RNA.446-201ENST00000384178 104 ntBASIC5.8□□□□□ -1.48
PDZRN3Q9UPQ7 MIR134-201ENST00000385258 73 ntBASIC5.8□□□□□ -1.48
PDZRN3Q9UPQ7 RN7SKP159-201ENST00000410657 292 ntBASIC5.8□□□□□ -1.48
PDZRN3Q9UPQ7 ELF3-AS1-201ENST00000415582 500 ntTSL 2 BASIC5.8□□□□□ -1.48
PDZRN3Q9UPQ7 PPIAP13-201ENST00000434706 478 ntBASIC5.8□□□□□ -1.48
PDZRN3Q9UPQ7 EEF1A1P1-201ENST00000447052 739 ntBASIC5.8□□□□□ -1.48
PDZRN3Q9UPQ7 AC074290.1-201ENST00000448883 135 ntBASIC5.8□□□□□ -1.48
PDZRN3Q9UPQ7 PPIAP3-201ENST00000450588 505 ntBASIC5.8□□□□□ -1.48
PDZRN3Q9UPQ7 BCL2L15-204ENST00000471267 267 ntTSL 1 (best) BASIC5.8□□□□□ -1.48
PDZRN3Q9UPQ7 AC135721.1-201ENST00000497954 479 ntBASIC5.8□□□□□ -1.48
PDZRN3Q9UPQ7 AC090151.1-201ENST00000520784 730 ntBASIC5.8□□□□□ -1.48
PDZRN3Q9UPQ7 MRPL49P2-201ENST00000521066 465 ntBASIC5.8□□□□□ -1.48
PDZRN3Q9UPQ7 AC008056.1-201ENST00000553322 394 ntTSL 3 BASIC5.8□□□□□ -1.48
PDZRN3Q9UPQ7 IPO5P1-202ENST00000600039 287 ntBASIC5.8□□□□□ -1.48
PDZRN3Q9UPQ7 AC105265.4-201ENST00000618391 306 ntTSL 5 BASIC5.8□□□□□ -1.48
PDZRN3Q9UPQ7 AP001273.1-201ENST00000624493 3152 ntBASIC5.8□□□□□ -1.48
PDZRN3Q9UPQ7 PTRH2-203ENST00000470557 4114 ntAPPRIS P3 BASIC5.8□□□□□ -1.48
PDZRN3Q9UPQ7 IPO5-201ENST00000261574 6003 ntTSL 1 (best) BASIC5.8□□□□□ -1.48
PDZRN3Q9UPQ7 A1CF-207ENST00000395495 9400 ntTSL 5 BASIC5.8□□□□□ -1.48
PDZRN3Q9UPQ7 ZFX-203ENST00000379177 7558 ntAPPRIS P1 TSL 1 (best) BASIC5.8□□□□□ -1.48
PDZRN3Q9UPQ7 MTND5P35-201ENST00000557537 1720 ntBASIC5.79□□□□□ -1.48
PDZRN3Q9UPQ7 EPHA7-202ENST00000369303 6588 ntAPPRIS P1 TSL 1 (best) BASIC5.79□□□□□ -1.48
PDZRN3Q9UPQ7 ROS1-201ENST00000368507 7417 ntAPPRIS ALT2 TSL 5 BASIC5.79□□□□□ -1.48
PDZRN3Q9UPQ7 TCF4-281ENST00000636822 7640 ntTSL 5 BASIC5.79□□□□□ -1.48
PDZRN3Q9UPQ7 ZNF705A-204ENST00000610508 3378 ntAPPRIS P1 TSL 5 BASIC5.79□□□□□ -1.48
PDZRN3Q9UPQ7 ZNF28-204ENST00000457749 4556 ntAPPRIS P1 TSL 1 (best) BASIC5.79□□□□□ -1.48
PDZRN3Q9UPQ7 ELAVL2-202ENST00000380110 3691 ntTSL 5 BASIC5.79□□□□□ -1.48
PDZRN3Q9UPQ7 RNU1-94P-201ENST00000362627 173 ntBASIC5.79□□□□□ -1.48
PDZRN3Q9UPQ7 RNU1-20P-201ENST00000363314 162 ntBASIC5.79□□□□□ -1.48
PDZRN3Q9UPQ7 Y_RNA.182-201ENST00000363880 111 ntBASIC5.79□□□□□ -1.48
PDZRN3Q9UPQ7 TRAJ32-201ENST00000390505 66 ntAPPRIS P1 BASIC5.79□□□□□ -1.48
PDZRN3Q9UPQ7 SNORA12.2-201ENST00000391040 156 ntBASIC5.79□□□□□ -1.48
PDZRN3Q9UPQ7 RPL7AP25-201ENST00000423357 805 ntBASIC5.79□□□□□ -1.48
PDZRN3Q9UPQ7 AL136084.2-202ENST00000433997 353 ntTSL 2 BASIC5.79□□□□□ -1.48
PDZRN3Q9UPQ7 AL136126.1-201ENST00000473603 402 ntBASIC5.79□□□□□ -1.48
PDZRN3Q9UPQ7 AC091167.1-201ENST00000492017 396 ntBASIC5.79□□□□□ -1.48
PDZRN3Q9UPQ7 LINC02017-201ENST00000496829 474 ntTSL 3 BASIC5.79□□□□□ -1.48
PDZRN3Q9UPQ7 IGKV1OR2-1-201ENST00000514060 354 ntBASIC5.79□□□□□ -1.48
PDZRN3Q9UPQ7 NDUFA5P6-201ENST00000542110 379 ntBASIC5.79□□□□□ -1.48
PDZRN3Q9UPQ7 LINC02286-201ENST00000552425 285 ntTSL 2 BASIC5.79□□□□□ -1.48
PDZRN3Q9UPQ7 MTND5P34-201ENST00000568888 325 ntBASIC5.79□□□□□ -1.48
PDZRN3Q9UPQ7 IGKV1OR2-118-201ENST00000603238 347 ntBASIC5.79□□□□□ -1.48
PDZRN3Q9UPQ7 AC011603.4-201ENST00000611325 277 ntBASIC5.79□□□□□ -1.48
PDZRN3Q9UPQ7 MIR492-201ENST00000638676 116 ntBASIC5.79□□□□□ -1.48
PDZRN3Q9UPQ7 DTNA-202ENST00000283365 6522 ntTSL 5 BASIC5.79□□□□□ -1.48
PDZRN3Q9UPQ7 PRKACB-202ENST00000370682 4288 ntTSL 1 (best) BASIC5.79□□□□□ -1.48
PDZRN3Q9UPQ7 TNRC6B-206ENST00000454349 18279 ntAPPRIS ALT2 TSL 2 BASIC5.79□□□□□ -1.48
PDZRN3Q9UPQ7 LRRC77P-206ENST00000481578 2350 ntTSL 1 (best) BASIC5.79□□□□□ -1.48
PDZRN3Q9UPQ7 RPS6KA5-207ENST00000614987 26795 ntAPPRIS P1 TSL 1 (best) BASIC5.79□□□□□ -1.48
PDZRN3Q9UPQ7 OR2AT4-203ENST00000641541 8795 ntAPPRIS P1 BASIC5.79□□□□□ -1.48
PDZRN3Q9UPQ7 TM4SF18-201ENST00000296059 3852 ntAPPRIS P1 TSL 1 (best) BASIC5.78□□□□□ -1.48
PDZRN3Q9UPQ7 AC069528.2-201ENST00000624849 1991 ntBASIC5.78□□□□□ -1.48
PDZRN3Q9UPQ7 TIPARP-207ENST00000542783 3681 ntAPPRIS P1 TSL 1 (best) BASIC5.78□□□□□ -1.48
PDZRN3Q9UPQ7 GALNT11-203ENST00000422997 2371 ntTSL 5 BASIC5.78□□□□□ -1.48
PDZRN3Q9UPQ7 SLCO1C1-201ENST00000266509 3365 ntAPPRIS P1 TSL 1 (best) BASIC5.78□□□□□ -1.48
PDZRN3Q9UPQ7 Y_RNA.121-201ENST00000363309 113 ntBASIC5.78□□□□□ -1.48
PDZRN3Q9UPQ7 Y_RNA.217-201ENST00000364214 105 ntBASIC5.78□□□□□ -1.48
PDZRN3Q9UPQ7 RNU6-371P-201ENST00000364283 108 ntBASIC5.78□□□□□ -1.48
PDZRN3Q9UPQ7 U8.6-201ENST00000364939 135 ntBASIC5.78□□□□□ -1.48
PDZRN3Q9UPQ7 RNU6-603P-201ENST00000411403 107 ntBASIC5.78□□□□□ -1.48
PDZRN3Q9UPQ7 AC092809.3-201ENST00000415453 231 ntBASIC5.78□□□□□ -1.48
PDZRN3Q9UPQ7 GSTA9P-202ENST00000448991 521 ntTSL 3 BASIC5.78□□□□□ -1.48
PDZRN3Q9UPQ7 AL353743.2-204ENST00000456242 419 ntTSL 3 BASIC5.78□□□□□ -1.48
PDZRN3Q9UPQ7 RNU6-1218P-201ENST00000458990 108 ntBASIC5.78□□□□□ -1.48
PDZRN3Q9UPQ7 SCARNA10-201ENST00000459255 330 ntBASIC5.78□□□□□ -1.48
PDZRN3Q9UPQ7 Y_RNA.641-201ENST00000459414 105 ntBASIC5.78□□□□□ -1.48
PDZRN3Q9UPQ7 Y_RNA.712-201ENST00000517011 92 ntBASIC5.78□□□□□ -1.48
PDZRN3Q9UPQ7 AP003730.1-201ENST00000524605 285 ntBASIC5.78□□□□□ -1.48
PDZRN3Q9UPQ7 C15orf41-212ENST00000567389 2618 ntTSL 1 (best) BASIC5.78□□□□□ -1.48
PDZRN3Q9UPQ7 VN1R84P-201ENST00000593697 235 ntBASIC5.78□□□□□ -1.48
PDZRN3Q9UPQ7 AC107294.1-201ENST00000609524 467 ntBASIC5.78□□□□□ -1.48
PDZRN3Q9UPQ7 AC131238.1-201ENST00000617135 328 ntBASIC5.78□□□□□ -1.48
PDZRN3Q9UPQ7 MIR3658-201ENST00000636291 56 ntBASIC5.78□□□□□ -1.48
PDZRN3Q9UPQ7 MAPK10-349ENST00000641767 3661 ntBASIC5.78□□□□□ -1.48
PDZRN3Q9UPQ7 FANCD2-202ENST00000383807 5102 ntAPPRIS ALT2 TSL 1 (best) BASIC5.78□□□□□ -1.48
PDZRN3Q9UPQ7 PCAT14-202ENST00000627127 3935 ntBASIC5.78□□□□□ -1.48
PDZRN3Q9UPQ7 TFPI-203ENST00000392365 3649 ntAPPRIS P1 TSL 5 BASIC5.78□□□□□ -1.48
PDZRN3Q9UPQ7 SPOCK3-225ENST00000535728 2007 ntAPPRIS ALT2 TSL 5 BASIC5.77□□□□□ -1.49
PDZRN3Q9UPQ7 LINC01938-201ENST00000521341 1864 ntTSL 2 BASIC5.77□□□□□ -1.49
PDZRN3Q9UPQ7 RNMT-206ENST00000589866 1879 ntAPPRIS P1 TSL 1 (best) BASIC5.77□□□□□ -1.49
PDZRN3Q9UPQ7 AC130650.2-201ENST00000618736 2403 ntBASIC5.77□□□□□ -1.49
Retrieved 100 of 98,524 protein–RNA pairs in 123.7 ms