Protein–RNA interactions for Protein: Q9UBP4

DKK3, Dickkopf-related protein 3, humanhuman

Predictions only

Length 350 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
DKK3Q9UBP4 RNU6-393P-201ENST00000384475 107 ntBASIC3.65□□□□□ -1.83
DKK3Q9UBP4 SNORD70.1-201ENST00000391007 85 ntBASIC3.65□□□□□ -1.83
DKK3Q9UBP4 SAR1AP2-201ENST00000392696 594 ntBASIC3.65□□□□□ -1.83
DKK3Q9UBP4 AL691426.1-201ENST00000416507 509 ntTSL 2 BASIC3.65□□□□□ -1.83
DKK3Q9UBP4 MTCO2P27-201ENST00000420740 428 ntBASIC3.65□□□□□ -1.83
DKK3Q9UBP4 HSPD1P21-201ENST00000436541 245 ntBASIC3.65□□□□□ -1.83
DKK3Q9UBP4 AC004691.1-201ENST00000440376 547 ntTSL 3 BASIC3.65□□□□□ -1.83
DKK3Q9UBP4 AC107399.1-201ENST00000451226 265 ntBASIC3.65□□□□□ -1.83
DKK3Q9UBP4 MIR1302-2HG-201ENST00000469289 535 ntTSL 5 BASIC3.65□□□□□ -1.83
DKK3Q9UBP4 MTND4P17-201ENST00000470444 350 ntBASIC3.65□□□□□ -1.83
DKK3Q9UBP4 AC104136.1-201ENST00000512969 394 ntBASIC3.65□□□□□ -1.83
DKK3Q9UBP4 Y_RNA.682-201ENST00000516457 100 ntBASIC3.65□□□□□ -1.83
DKK3Q9UBP4 RNU1-103P-201ENST00000516502 125 ntBASIC3.65□□□□□ -1.83
DKK3Q9UBP4 AC104211.1-202ENST00000521307 866 ntTSL 3 BASIC3.65□□□□□ -1.83
DKK3Q9UBP4 AP001825.1-201ENST00000534275 351 ntTSL 2 BASIC3.65□□□□□ -1.83
DKK3Q9UBP4 SNHG1-210ENST00000539303 240 ntTSL 3 BASIC3.65□□□□□ -1.83
DKK3Q9UBP4 DIAPH2-AS1-203ENST00000542084 450 ntTSL 5 BASIC3.65□□□□□ -1.83
DKK3Q9UBP4 AL121821.2-201ENST00000556081 394 ntBASIC3.65□□□□□ -1.83
DKK3Q9UBP4 FRG2DP-202ENST00000566967 323 ntBASIC3.65□□□□□ -1.83
DKK3Q9UBP4 MIR3672-201ENST00000584290 82 ntBASIC3.65□□□□□ -1.83
DKK3Q9UBP4 AC023043.2-201ENST00000589678 1026 ntBASIC3.65□□□□□ -1.83
DKK3Q9UBP4 AP005264.4-201ENST00000592203 422 ntTSL 5 BASIC3.65□□□□□ -1.83
DKK3Q9UBP4 AL133215.3-201ENST00000609801 448 ntBASIC3.65□□□□□ -1.83
DKK3Q9UBP4 U2.17-201ENST00000611454 95 ntBASIC3.65□□□□□ -1.83
DKK3Q9UBP4 PHF3-202ENST00000393387 6947 ntAPPRIS P1 TSL 1 (best) BASIC3.65□□□□□ -1.83
DKK3Q9UBP4 DMD-203ENST00000357033 13956 ntAPPRIS P3 TSL 1 (best) BASIC3.64□□□□□ -1.83
DKK3Q9UBP4 CEP44-201ENST00000296519 4173 ntAPPRIS P1 TSL 1 (best) BASIC3.64□□□□□ -1.83
DKK3Q9UBP4 ZNF483-201ENST00000309235 3655 ntAPPRIS P1 TSL 1 (best) BASIC3.64□□□□□ -1.83
DKK3Q9UBP4 NUFIP2-201ENST00000225388 10850 ntAPPRIS P1 TSL 1 (best) BASIC3.64□□□□□ -1.83
DKK3Q9UBP4 POSTN-203ENST00000379747 3373 ntAPPRIS P3 TSL 1 (best) BASIC3.64□□□□□ -1.83
DKK3Q9UBP4 PTPN22-211ENST00000538253 3575 ntTSL 1 (best) BASIC3.64□□□□□ -1.83
DKK3Q9UBP4 IQCG-205ENST00000455191 1981 ntAPPRIS P1 TSL 2 BASIC3.64□□□□□ -1.83
DKK3Q9UBP4 TMCO5A-203ENST00000558158 2894 ntAPPRIS ALT2 TSL 3 BASIC3.64□□□□□ -1.83
DKK3Q9UBP4 LINC00836-202ENST00000626230 1640 ntTSL 2 BASIC3.64□□□□□ -1.83
DKK3Q9UBP4 FMNL2-202ENST00000475377 3648 ntTSL 5 BASIC3.64□□□□□ -1.83
DKK3Q9UBP4 Y_RNA.138-201ENST00000363462 102 ntBASIC3.64□□□□□ -1.83
DKK3Q9UBP4 RNU6-434P-201ENST00000384376 107 ntBASIC3.64□□□□□ -1.83
DKK3Q9UBP4 TRAV26-1-201ENST00000390455 537 ntAPPRIS P1 BASIC3.64□□□□□ -1.83
DKK3Q9UBP4 SNORA16.2-201ENST00000390991 127 ntBASIC3.64□□□□□ -1.83
DKK3Q9UBP4 RN7SKP158-201ENST00000410453 326 ntBASIC3.64□□□□□ -1.83
DKK3Q9UBP4 AC004870.4-201ENST00000424359 360 ntTSL 2 BASIC3.64□□□□□ -1.83
DKK3Q9UBP4 NDUFB1P1-201ENST00000435191 180 ntBASIC3.64□□□□□ -1.83
DKK3Q9UBP4 LINC01564-201ENST00000448327 566 ntTSL 3 BASIC3.64□□□□□ -1.83
DKK3Q9UBP4 AL353148.1-201ENST00000449761 463 ntTSL 2 BASIC3.64□□□□□ -1.83
DKK3Q9UBP4 LINC01077-201ENST00000452288 413 ntTSL 3 BASIC3.64□□□□□ -1.83
DKK3Q9UBP4 RNU7-167P-201ENST00000459160 62 ntBASIC3.64□□□□□ -1.83
DKK3Q9UBP4 DYNLL1P5-201ENST00000467158 270 ntBASIC3.64□□□□□ -1.83
DKK3Q9UBP4 OARD1-209ENST00000471367 401 ntTSL 2 BASIC3.64□□□□□ -1.83
DKK3Q9UBP4 RPS29P2-201ENST00000479278 136 ntBASIC3.64□□□□□ -1.83
DKK3Q9UBP4 VN1R104P-201ENST00000505115 1009 ntBASIC3.64□□□□□ -1.83
DKK3Q9UBP4 RNU6-1170P-201ENST00000515974 106 ntBASIC3.64□□□□□ -1.83
DKK3Q9UBP4 RNU6-559P-201ENST00000516151 98 ntBASIC3.64□□□□□ -1.83
DKK3Q9UBP4 RNU6-579P-201ENST00000516879 102 ntBASIC3.64□□□□□ -1.83
DKK3Q9UBP4 RNU6-840P-201ENST00000517275 65 ntBASIC3.64□□□□□ -1.83
DKK3Q9UBP4 AC087439.1-201ENST00000517920 398 ntTSL 3 BASIC3.64□□□□□ -1.83
DKK3Q9UBP4 AC011611.2-201ENST00000549888 358 ntTSL 3 BASIC3.64□□□□□ -1.83
DKK3Q9UBP4 AC093249.1-201ENST00000567049 203 ntBASIC3.64□□□□□ -1.83
DKK3Q9UBP4 U3.45-201ENST00000607547 219 ntBASIC3.64□□□□□ -1.83
DKK3Q9UBP4 AC134503.1-201ENST00000633048 54 ntBASIC3.64□□□□□ -1.83
DKK3Q9UBP4 FOXP2-227ENST00000638397 240 ntTSL 5 BASIC3.64□□□□□ -1.83
DKK3Q9UBP4 RAD17-206ENST00000358030 2648 ntTSL 1 (best) BASIC3.64□□□□□ -1.83
DKK3Q9UBP4 MTCO1P12-201ENST00000414273 1543 ntBASIC3.64□□□□□ -1.83
DKK3Q9UBP4 C12orf4-201ENST00000261250 3826 ntAPPRIS P1 TSL 1 (best) BASIC3.64□□□□□ -1.83
DKK3Q9UBP4 LRRC6-212ENST00000618342 1754 ntAPPRIS ALT1 TSL 5 BASIC3.63□□□□□ -1.83
DKK3Q9UBP4 AL049781.1-201ENST00000623195 3585 ntBASIC3.63□□□□□ -1.83
DKK3Q9UBP4 TAS2R13-201ENST00000390677 1637 ntAPPRIS P1 BASIC3.63□□□□□ -1.83
DKK3Q9UBP4 MAPK10-362ENST00000641864 4484 ntBASIC3.63□□□□□ -1.83
DKK3Q9UBP4 AGL-206ENST00000370165 7106 ntAPPRIS P1 TSL 1 (best) BASIC3.63□□□□□ -1.83
DKK3Q9UBP4 GABRG2-222ENST00000639975 3662 ntTSL 5 BASIC3.63□□□□□ -1.83
DKK3Q9UBP4 LRRC39-201ENST00000342895 1881 ntAPPRIS P1 TSL 5 BASIC3.63□□□□□ -1.83
DKK3Q9UBP4 WRN-201ENST00000298139 5215 ntAPPRIS P1 TSL 1 (best) BASIC3.63□□□□□ -1.83
DKK3Q9UBP4 Y_RNA.162-201ENST00000363683 102 ntBASIC3.63□□□□□ -1.83
DKK3Q9UBP4 SNORD42.2-201ENST00000365570 69 ntBASIC3.63□□□□□ -1.83
DKK3Q9UBP4 Y_RNA.500-201ENST00000384466 111 ntBASIC3.63□□□□□ -1.83
DKK3Q9UBP4 AL360182.1-201ENST00000397433 468 ntBASIC3.63□□□□□ -1.83
DKK3Q9UBP4 HSPE1P8-201ENST00000406997 288 ntBASIC3.63□□□□□ -1.83
DKK3Q9UBP4 NT5C3A-205ENST00000409467 1032 ntAPPRIS ALT1 TSL 5 BASIC3.63□□□□□ -1.83
DKK3Q9UBP4 AL357500.1-201ENST00000413004 279 ntTSL 3 BASIC3.63□□□□□ -1.83
DKK3Q9UBP4 BTF3L4P3-201ENST00000418879 476 ntBASIC3.63□□□□□ -1.83
DKK3Q9UBP4 YPEL5P1-201ENST00000419731 367 ntBASIC3.63□□□□□ -1.83
DKK3Q9UBP4 AL353729.1-201ENST00000425044 720 ntBASIC3.63□□□□□ -1.83
DKK3Q9UBP4 AL669831.1-202ENST00000428504 417 ntBASIC3.63□□□□□ -1.83
DKK3Q9UBP4 RPL21P40-201ENST00000428586 483 ntBASIC3.63□□□□□ -1.83
DKK3Q9UBP4 HMGN2P31-201ENST00000432430 273 ntBASIC3.63□□□□□ -1.83
DKK3Q9UBP4 AC008264.1-201ENST00000447612 367 ntBASIC3.63□□□□□ -1.83
DKK3Q9UBP4 Y_RNA.639-201ENST00000458981 102 ntBASIC3.63□□□□□ -1.83
DKK3Q9UBP4 RNU7-152P-201ENST00000458982 64 ntBASIC3.63□□□□□ -1.83
DKK3Q9UBP4 RPL7P43-201ENST00000478876 753 ntBASIC3.63□□□□□ -1.83
DKK3Q9UBP4 AC096576.1-201ENST00000489014 359 ntBASIC3.63□□□□□ -1.83
DKK3Q9UBP4 RNU2-69P-201ENST00000516061 100 ntBASIC3.63□□□□□ -1.83
DKK3Q9UBP4 Y_RNA.718-201ENST00000517110 102 ntBASIC3.63□□□□□ -1.83
DKK3Q9UBP4 RNA5SP380-201ENST00000517190 98 ntBASIC3.63□□□□□ -1.83
DKK3Q9UBP4 RNA5SP454-201ENST00000517231 127 ntBASIC3.63□□□□□ -1.83
DKK3Q9UBP4 IL7-206ENST00000520269 456 ntTSL 3 BASIC3.63□□□□□ -1.83
DKK3Q9UBP4 AP003072.1-201ENST00000531740 145 ntBASIC3.63□□□□□ -1.83
DKK3Q9UBP4 LINC00508-201ENST00000538901 194 ntTSL 5 BASIC3.63□□□□□ -1.83
DKK3Q9UBP4 AC092718.6-202ENST00000563072 408 ntTSL 2 BASIC3.63□□□□□ -1.83
DKK3Q9UBP4 MTCO3P13-201ENST00000577757 781 ntBASIC3.63□□□□□ -1.83
DKK3Q9UBP4 APOOP1-201ENST00000604695 592 ntBASIC3.63□□□□□ -1.83
DKK3Q9UBP4 AL158032.1-201ENST00000605401 106 ntBASIC3.63□□□□□ -1.83
Retrieved 100 of 98,524 protein–RNA pairs in 154.5 ms