Protein–RNA interactions for Protein: Q9H9A6

LRRC40, Leucine-rich repeat-containing protein 40, humanhuman

Predictions only

Length 602 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LRRC40Q9H9A6 AL670379.9-201ENST00000605428 253 ntBASIC2.15□□□□□ -2.07
LRRC40Q9H9A6 AL391813.2-201ENST00000609113 322 ntBASIC2.15□□□□□ -2.07
LRRC40Q9H9A6 C8orf59-209ENST00000612977 586 ntAPPRIS P1 TSL 2 BASIC2.15□□□□□ -2.07
LRRC40Q9H9A6 AL139418.1-201ENST00000613613 177 ntBASIC2.15□□□□□ -2.07
LRRC40Q9H9A6 AP001486.3-201ENST00000615334 372 ntBASIC2.15□□□□□ -2.07
LRRC40Q9H9A6 MIR6873-201ENST00000622788 63 ntBASIC2.15□□□□□ -2.07
LRRC40Q9H9A6 IGHVIII-44-202ENST00000636235 289 ntBASIC2.15□□□□□ -2.07
LRRC40Q9H9A6 ANKRD36BP1-202ENST00000604892 1417 ntBASIC2.15□□□□□ -2.07
LRRC40Q9H9A6 OR5M1-202ENST00000641076 4302 ntAPPRIS P1 BASIC2.15□□□□□ -2.07
LRRC40Q9H9A6 SNX10-209ENST00000619420 2361 ntAPPRIS ALT1 TSL 5 BASIC2.14□□□□□ -2.07
LRRC40Q9H9A6 SNORA4.3-201ENST00000365564 137 ntBASIC2.14□□□□□ -2.07
LRRC40Q9H9A6 SMIM11P1-201ENST00000369586 178 ntBASIC2.14□□□□□ -2.07
LRRC40Q9H9A6 RNU6-301P-201ENST00000384277 107 ntBASIC2.14□□□□□ -2.07
LRRC40Q9H9A6 RNU6-83P-201ENST00000384568 112 ntBASIC2.14□□□□□ -2.07
LRRC40Q9H9A6 MIR17-201ENST00000385012 84 ntBASIC2.14□□□□□ -2.07
LRRC40Q9H9A6 AC104777.3-201ENST00000416350 545 ntTSL 3 BASIC2.14□□□□□ -2.07
LRRC40Q9H9A6 AC093911.1-201ENST00000419129 552 ntTSL 4 BASIC2.14□□□□□ -2.07
LRRC40Q9H9A6 AL356277.2-201ENST00000421318 441 ntTSL 2 BASIC2.14□□□□□ -2.07
LRRC40Q9H9A6 MTCO2P23-201ENST00000425216 680 ntBASIC2.14□□□□□ -2.07
LRRC40Q9H9A6 AL596220.1-202ENST00000429768 314 ntTSL 3 BASIC2.14□□□□□ -2.07
LRRC40Q9H9A6 AL731563.2-201ENST00000431293 291 ntTSL 5 BASIC2.14□□□□□ -2.07
LRRC40Q9H9A6 AL024508.1-201ENST00000432477 505 ntTSL 2 BASIC2.14□□□□□ -2.07
LRRC40Q9H9A6 AL591212.2-201ENST00000433923 257 ntBASIC2.14□□□□□ -2.07
LRRC40Q9H9A6 AC104653.2-201ENST00000435407 416 ntTSL 3 BASIC2.14□□□□□ -2.07
LRRC40Q9H9A6 AL078601.1-201ENST00000444542 271 ntBASIC2.14□□□□□ -2.07
LRRC40Q9H9A6 AL009048.1-201ENST00000450437 298 ntBASIC2.14□□□□□ -2.07
LRRC40Q9H9A6 FABP5P13-201ENST00000452144 328 ntBASIC2.14□□□□□ -2.07
LRRC40Q9H9A6 AL160287.1-201ENST00000455612 432 ntTSL 3 BASIC2.14□□□□□ -2.07
LRRC40Q9H9A6 AC093899.1-201ENST00000457984 376 ntBASIC2.14□□□□□ -2.07
LRRC40Q9H9A6 AC025033.1-201ENST00000463883 194 ntBASIC2.14□□□□□ -2.07
LRRC40Q9H9A6 AC107032.1-201ENST00000485945 480 ntBASIC2.14□□□□□ -2.07
LRRC40Q9H9A6 AC091951.3-201ENST00000504093 246 ntBASIC2.14□□□□□ -2.07
LRRC40Q9H9A6 FAM92A1P2-202ENST00000504766 877 ntBASIC2.14□□□□□ -2.07
LRRC40Q9H9A6 AC097478.1-204ENST00000509723 547 ntTSL 3 BASIC2.14□□□□□ -2.07
LRRC40Q9H9A6 RNU6-677P-201ENST00000516914 101 ntBASIC2.14□□□□□ -2.07
LRRC40Q9H9A6 AP002770.2-201ENST00000543613 532 ntBASIC2.14□□□□□ -2.07
LRRC40Q9H9A6 AC078778.1-201ENST00000547177 735 ntTSL 3 BASIC2.14□□□□□ -2.07
LRRC40Q9H9A6 POC1B-211ENST00000549504 581 ntTSL 5 BASIC2.14□□□□□ -2.07
LRRC40Q9H9A6 AL450442.1-201ENST00000554042 854 ntTSL 1 (best) BASIC2.14□□□□□ -2.07
LRRC40Q9H9A6 LINC01899-202ENST00000583756 575 ntTSL 3 BASIC2.14□□□□□ -2.07
LRRC40Q9H9A6 AC020910.1-201ENST00000599404 413 ntTSL 5 BASIC2.14□□□□□ -2.07
LRRC40Q9H9A6 AP000860.1-201ENST00000605250 559 ntBASIC2.14□□□□□ -2.07
LRRC40Q9H9A6 AC022893.3-201ENST00000607665 437 ntBASIC2.14□□□□□ -2.07
LRRC40Q9H9A6 AL607023.1-201ENST00000620045 248 ntBASIC2.14□□□□□ -2.07
LRRC40Q9H9A6 USP12-203ENST00000620323 349 ntTSL 3 BASIC2.14□□□□□ -2.07
LRRC40Q9H9A6 AL160287.1-202ENST00000638113 454 ntTSL 5 BASIC2.14□□□□□ -2.07
LRRC40Q9H9A6 SYT14-201ENST00000367015 5094 ntAPPRIS ALT2 TSL 1 (best) BASIC2.14□□□□□ -2.07
LRRC40Q9H9A6 ZBED5-201ENST00000413761 2512 ntAPPRIS P1 TSL 1 (best) BASIC2.13□□□□□ -2.07
LRRC40Q9H9A6 Y_RNA.534-201ENST00000384599 112 ntBASIC2.13□□□□□ -2.07
LRRC40Q9H9A6 MIR518D-201ENST00000385014 87 ntBASIC2.13□□□□□ -2.07
LRRC40Q9H9A6 MRLN-201ENST00000414264 422 ntAPPRIS P2 TSL 1 (best) BASIC2.13□□□□□ -2.07
LRRC40Q9H9A6 AL135786.1-201ENST00000415892 214 ntBASIC2.13□□□□□ -2.07
LRRC40Q9H9A6 AIMP1P2-201ENST00000425294 312 ntBASIC2.13□□□□□ -2.07
LRRC40Q9H9A6 AL592466.1-201ENST00000428346 307 ntTSL 5 BASIC2.13□□□□□ -2.07
LRRC40Q9H9A6 AL139397.1-201ENST00000430456 644 ntTSL 2 BASIC2.13□□□□□ -2.07
LRRC40Q9H9A6 AL591704.1-201ENST00000432574 275 ntBASIC2.13□□□□□ -2.07
LRRC40Q9H9A6 AC114485.1-201ENST00000447916 657 ntTSL 3 BASIC2.13□□□□□ -2.07
LRRC40Q9H9A6 AL021397.1-201ENST00000451806 248 ntBASIC2.13□□□□□ -2.07
LRRC40Q9H9A6 AL139824.2-201ENST00000458731 1095 ntBASIC2.13□□□□□ -2.07
LRRC40Q9H9A6 AC117503.1-201ENST00000472241 394 ntBASIC2.13□□□□□ -2.07
LRRC40Q9H9A6 AC016556.1-201ENST00000510004 935 ntTSL 2 BASIC2.13□□□□□ -2.07
LRRC40Q9H9A6 RNU6-914P-201ENST00000516749 109 ntBASIC2.13□□□□□ -2.07
LRRC40Q9H9A6 RNU1-40P-201ENST00000516816 164 ntBASIC2.13□□□□□ -2.07
LRRC40Q9H9A6 RNU1-97P-201ENST00000516872 164 ntBASIC2.13□□□□□ -2.07
LRRC40Q9H9A6 RNU6-1315P-201ENST00000517187 99 ntBASIC2.13□□□□□ -2.07
LRRC40Q9H9A6 AC108449.1-202ENST00000517632 478 ntTSL 3 BASIC2.13□□□□□ -2.07
LRRC40Q9H9A6 AC021698.1-201ENST00000524858 716 ntTSL 3 BASIC2.13□□□□□ -2.07
LRRC40Q9H9A6 MYL12A-202ENST00000536605 899 ntAPPRIS P1 TSL 1 (best) BASIC2.13□□□□□ -2.07
LRRC40Q9H9A6 AC123904.2-201ENST00000548059 300 ntBASIC2.13□□□□□ -2.07
LRRC40Q9H9A6 AC123905.1-201ENST00000552098 541 ntTSL 4 BASIC2.13□□□□□ -2.07
LRRC40Q9H9A6 MIR4529-201ENST00000578110 78 ntBASIC2.13□□□□□ -2.07
LRRC40Q9H9A6 MYL12A-209ENST00000580887 899 ntTSL 1 (best) BASIC2.13□□□□□ -2.07
LRRC40Q9H9A6 AP005057.1-201ENST00000583827 574 ntTSL 4 BASIC2.13□□□□□ -2.07
LRRC40Q9H9A6 AF131215.7-201ENST00000602443 707 ntBASIC2.13□□□□□ -2.07
LRRC40Q9H9A6 AC112187.2-201ENST00000604345 283 ntBASIC2.13□□□□□ -2.07
LRRC40Q9H9A6 RNU6-91P-201ENST00000607774 107 ntBASIC2.13□□□□□ -2.07
LRRC40Q9H9A6 AC130324.3-201ENST00000614165 542 ntBASIC2.13□□□□□ -2.07
LRRC40Q9H9A6 uc_338.12-201ENST00000616344 181 ntBASIC2.13□□□□□ -2.07
LRRC40Q9H9A6 AL162373.1-201ENST00000620433 407 ntBASIC2.13□□□□□ -2.07
LRRC40Q9H9A6 AC092104.1-201ENST00000497346 1441 ntBASIC2.13□□□□□ -2.07
LRRC40Q9H9A6 PLOD2-204ENST00000461497 3043 ntTSL 2 BASIC2.12□□□□□ -2.07
LRRC40Q9H9A6 CEP57L1-203ENST00000368970 1680 ntAPPRIS ALT2 TSL 5 BASIC2.12□□□□□ -2.07
LRRC40Q9H9A6 AKAP7-209ENST00000541650 2008 ntTSL 5 BASIC2.12□□□□□ -2.07
LRRC40Q9H9A6 SNORA40C-201ENST00000391285 128 ntBASIC2.12□□□□□ -2.07
LRRC40Q9H9A6 RNU6-1025P-201ENST00000410629 104 ntBASIC2.12□□□□□ -2.07
LRRC40Q9H9A6 AL158834.1-201ENST00000419441 466 ntTSL 5 BASIC2.12□□□□□ -2.07
LRRC40Q9H9A6 AL354692.1-201ENST00000423044 315 ntBASIC2.12□□□□□ -2.07
LRRC40Q9H9A6 AL162400.2-201ENST00000427547 157 ntTSL 3 BASIC2.12□□□□□ -2.07
LRRC40Q9H9A6 AL353612.1-201ENST00000428769 465 ntTSL 3 BASIC2.12□□□□□ -2.07
LRRC40Q9H9A6 HMGB3P12-201ENST00000438745 556 ntBASIC2.12□□□□□ -2.07
LRRC40Q9H9A6 SFTA1P-203ENST00000446372 693 ntTSL 1 (best) BASIC2.12□□□□□ -2.07
LRRC40Q9H9A6 AC069549.1-201ENST00000451584 499 ntTSL 3 BASIC2.12□□□□□ -2.07
LRRC40Q9H9A6 SATB1-AS1-204ENST00000453361 726 ntTSL 3 BASIC2.12□□□□□ -2.07
LRRC40Q9H9A6 RNU6-717P-201ENST00000459076 104 ntBASIC2.12□□□□□ -2.07
LRRC40Q9H9A6 RPS3AP22-201ENST00000488297 769 ntBASIC2.12□□□□□ -2.07
LRRC40Q9H9A6 AC079943.2-201ENST00000488999 716 ntTSL 3 BASIC2.12□□□□□ -2.07
LRRC40Q9H9A6 AC008869.1-201ENST00000510938 442 ntTSL 2 BASIC2.12□□□□□ -2.07
LRRC40Q9H9A6 PCAT4-202ENST00000514836 373 ntTSL 3 BASIC2.12□□□□□ -2.07
LRRC40Q9H9A6 AP002884.4-201ENST00000527589 594 ntTSL 3 BASIC2.12□□□□□ -2.07
LRRC40Q9H9A6 IFNG-AS1-201ENST00000536914 494 ntTSL 5 BASIC2.12□□□□□ -2.07
Retrieved 100 of 98,524 protein–RNA pairs in 100.2 ms