Protein–RNA interactions for Protein: Q9BZI7

UPF3B, Regulator of nonsense transcripts 3B, humanhuman

Known RBP Predictions only

Length 483 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UPF3BQ9BZI7 RPL7P27-201ENST00000403775 720 ntBASIC1.79□□□□□ -2.12
UPF3BQ9BZI7 AL033519.2-201ENST00000403958 392 ntBASIC1.79□□□□□ -2.12
UPF3BQ9BZI7 AC096920.1-201ENST00000423991 241 ntBASIC1.79□□□□□ -2.12
UPF3BQ9BZI7 AL353718.1-201ENST00000451028 517 ntBASIC1.79□□□□□ -2.12
UPF3BQ9BZI7 LINC01546-201ENST00000457435 674 ntTSL 2 BASIC1.79□□□□□ -2.12
UPF3BQ9BZI7 AP005660.1-201ENST00000522972 293 ntBASIC1.79□□□□□ -2.12
UPF3BQ9BZI7 TSPAN19-204ENST00000532498 998 ntAPPRIS P1 TSL 5 BASIC1.79□□□□□ -2.12
UPF3BQ9BZI7 AC011604.1-201ENST00000545978 196 ntBASIC1.79□□□□□ -2.12
UPF3BQ9BZI7 AL157911.1-202ENST00000554123 502 ntTSL 3 BASIC1.79□□□□□ -2.12
UPF3BQ9BZI7 AC023394.2-201ENST00000581987 792 ntTSL 5 BASIC1.79□□□□□ -2.12
UPF3BQ9BZI7 AL353997.4-201ENST00000586196 166 ntBASIC1.79□□□□□ -2.12
UPF3BQ9BZI7 AC098848.2-201ENST00000588023 330 ntBASIC1.79□□□□□ -2.12
UPF3BQ9BZI7 AC005261.5-201ENST00000596280 355 ntBASIC1.79□□□□□ -2.12
UPF3BQ9BZI7 AC106052.1-201ENST00000608029 497 ntBASIC1.79□□□□□ -2.12
UPF3BQ9BZI7 AC243773.3-201ENST00000613270 256 ntBASIC1.79□□□□□ -2.12
UPF3BQ9BZI7 AL773524.1-201ENST00000614065 229 ntBASIC1.79□□□□□ -2.12
UPF3BQ9BZI7 GNAS-AS1_4.1-201ENST00000616546 112 ntBASIC1.79□□□□□ -2.12
UPF3BQ9BZI7 TRAPPC13-204ENST00000438419 1437 ntAPPRIS P4 TSL 1 (best) BASIC1.79□□□□□ -2.12
UPF3BQ9BZI7 AC103993.1-201ENST00000521500 1584 ntTSL 5 BASIC1.79□□□□□ -2.12
UPF3BQ9BZI7 OR13C4-201ENST00000277216 957 ntAPPRIS P1 BASIC1.78□□□□□ -2.12
UPF3BQ9BZI7 Y_RNA.245-201ENST00000364493 95 ntBASIC1.78□□□□□ -2.12
UPF3BQ9BZI7 AL159990.1-201ENST00000415119 337 ntTSL 3 BASIC1.78□□□□□ -2.12
UPF3BQ9BZI7 LINC01509-202ENST00000423523 408 ntTSL 3 BASIC1.78□□□□□ -2.12
UPF3BQ9BZI7 RPL7P34-201ENST00000433316 712 ntBASIC1.78□□□□□ -2.12
UPF3BQ9BZI7 SEPT7P5-201ENST00000434048 306 ntBASIC1.78□□□□□ -2.12
UPF3BQ9BZI7 MTND1P28-201ENST00000435623 950 ntBASIC1.78□□□□□ -2.12
UPF3BQ9BZI7 AL159990.2-201ENST00000436491 337 ntTSL 3 BASIC1.78□□□□□ -2.12
UPF3BQ9BZI7 PTGES3P1-201ENST00000439531 483 ntBASIC1.78□□□□□ -2.12
UPF3BQ9BZI7 AL161651.1-201ENST00000440882 223 ntBASIC1.78□□□□□ -2.12
UPF3BQ9BZI7 LINC01564-201ENST00000448327 566 ntTSL 3 BASIC1.78□□□□□ -2.12
UPF3BQ9BZI7 RNA5SP102-201ENST00000516865 106 ntBASIC1.78□□□□□ -2.12
UPF3BQ9BZI7 AC107909.2-201ENST00000520844 493 ntTSL 3 BASIC1.78□□□□□ -2.12
UPF3BQ9BZI7 HIGD1AP17-201ENST00000554576 276 ntBASIC1.78□□□□□ -2.12
UPF3BQ9BZI7 PSMA3P-201ENST00000555485 635 ntBASIC1.78□□□□□ -2.12
UPF3BQ9BZI7 AL136298.1-201ENST00000557371 566 ntTSL 3 BASIC1.78□□□□□ -2.12
UPF3BQ9BZI7 AC011477.3-201ENST00000585571 403 ntTSL 5 BASIC1.78□□□□□ -2.12
UPF3BQ9BZI7 WISP1-OT1-201ENST00000602893 642 ntBASIC1.78□□□□□ -2.12
UPF3BQ9BZI7 AC012360.2-201ENST00000609349 391 ntBASIC1.78□□□□□ -2.12
UPF3BQ9BZI7 DUSP12P1-201ENST00000612874 516 ntBASIC1.78□□□□□ -2.12
UPF3BQ9BZI7 AC019226.1-201ENST00000625666 515 ntBASIC1.78□□□□□ -2.12
UPF3BQ9BZI7 LINC01359-207ENST00000634799 487 ntTSL 5 BASIC1.78□□□□□ -2.12
UPF3BQ9BZI7 PPP1R3A-201ENST00000284601 4384 ntAPPRIS P1 TSL 1 (best) BASIC1.78□□□□□ -2.12
UPF3BQ9BZI7 SHOC2-201ENST00000265277 3691 ntTSL 2 BASIC1.78□□□□□ -2.13
UPF3BQ9BZI7 RNU6-19P-201ENST00000384718 107 ntBASIC1.77□□□□□ -2.13
UPF3BQ9BZI7 SNORD65.1-201ENST00000390889 71 ntBASIC1.77□□□□□ -2.13
UPF3BQ9BZI7 LINC01724-201ENST00000430519 621 ntTSL 3 BASIC1.77□□□□□ -2.13
UPF3BQ9BZI7 AC087884.1-201ENST00000469738 328 ntBASIC1.77□□□□□ -2.13
UPF3BQ9BZI7 AC023790.1-201ENST00000482174 347 ntBASIC1.77□□□□□ -2.13
UPF3BQ9BZI7 SMAD1-AS2-201ENST00000508936 1090 ntTSL 1 (best) BASIC1.77□□□□□ -2.13
UPF3BQ9BZI7 AC110760.3-202ENST00000515177 371 ntBASIC1.77□□□□□ -2.13
UPF3BQ9BZI7 RNU6-703P-201ENST00000516946 107 ntBASIC1.77□□□□□ -2.13
UPF3BQ9BZI7 AC026616.1-201ENST00000523157 525 ntBASIC1.77□□□□□ -2.13
UPF3BQ9BZI7 LINC01608-201ENST00000523557 544 ntTSL 4 BASIC1.77□□□□□ -2.13
UPF3BQ9BZI7 LINC01919-202ENST00000579506 384 ntTSL 3 BASIC1.77□□□□□ -2.13
UPF3BQ9BZI7 AL139344.1-201ENST00000605228 195 ntBASIC1.77□□□□□ -2.13
UPF3BQ9BZI7 AC012467.1-201ENST00000607740 256 ntBASIC1.77□□□□□ -2.13
UPF3BQ9BZI7 AF129408.1-201ENST00000608767 431 ntBASIC1.77□□□□□ -2.13
UPF3BQ9BZI7 AC107075.1-201ENST00000613695 314 ntBASIC1.77□□□□□ -2.13
UPF3BQ9BZI7 AC020658.4-201ENST00000613987 684 ntBASIC1.77□□□□□ -2.13
UPF3BQ9BZI7 CENPQ-201ENST00000335783 1733 ntAPPRIS P1 TSL 1 (best) BASIC1.77□□□□□ -2.13
UPF3BQ9BZI7 ATF1-201ENST00000262053 2181 ntAPPRIS P1 TSL 1 (best) BASIC1.76□□□□□ -2.13
UPF3BQ9BZI7 CDR1-202ENST00000625883 1485 ntBASIC1.76□□□□□ -2.13
UPF3BQ9BZI7 ASPN-202ENST00000375544 2470 ntAPPRIS P1 TSL 1 (best) BASIC1.76□□□□□ -2.13
UPF3BQ9BZI7 LINC01938-201ENST00000521341 1864 ntTSL 2 BASIC1.76□□□□□ -2.13
UPF3BQ9BZI7 RNU4-13P-201ENST00000364019 141 ntBASIC1.76□□□□□ -2.13
UPF3BQ9BZI7 RNU6-354P-201ENST00000383862 107 ntBASIC1.76□□□□□ -2.13
UPF3BQ9BZI7 RNU1-39P-201ENST00000383897 165 ntBASIC1.76□□□□□ -2.13
UPF3BQ9BZI7 RNU6-610P-201ENST00000384264 107 ntBASIC1.76□□□□□ -2.13
UPF3BQ9BZI7 RNU6-748P-201ENST00000384648 107 ntBASIC1.76□□□□□ -2.13
UPF3BQ9BZI7 AL356421.1-201ENST00000403255 413 ntBASIC1.76□□□□□ -2.13
UPF3BQ9BZI7 RNA5SP450-201ENST00000411206 102 ntBASIC1.76□□□□□ -2.13
UPF3BQ9BZI7 AL050303.1-201ENST00000444356 458 ntTSL 2 BASIC1.76□□□□□ -2.13
UPF3BQ9BZI7 Z73417.1-201ENST00000447373 778 ntBASIC1.76□□□□□ -2.13
UPF3BQ9BZI7 AC092422.1-201ENST00000455576 584 ntTSL 4 BASIC1.76□□□□□ -2.13
UPF3BQ9BZI7 AC026414.1-201ENST00000504046 698 ntBASIC1.76□□□□□ -2.13
UPF3BQ9BZI7 RNU6-970P-201ENST00000516312 107 ntBASIC1.76□□□□□ -2.13
UPF3BQ9BZI7 AP003497.1-201ENST00000528472 562 ntBASIC1.76□□□□□ -2.13
UPF3BQ9BZI7 OR5AL2P-201ENST00000532185 920 ntBASIC1.76□□□□□ -2.13
UPF3BQ9BZI7 AL645939.4-201ENST00000604495 135 ntBASIC1.76□□□□□ -2.13
UPF3BQ9BZI7 AL109811.3-202ENST00000612387 651 ntTSL 3 BASIC1.76□□□□□ -2.13
UPF3BQ9BZI7 TUG1_2.1-201ENST00000614234 87 ntBASIC1.76□□□□□ -2.13
UPF3BQ9BZI7 FP475955.2-201ENST00000623720 458 ntTSL 2 BASIC1.76□□□□□ -2.13
UPF3BQ9BZI7 AC007490.1-201ENST00000624321 703 ntBASIC1.76□□□□□ -2.13
UPF3BQ9BZI7 LINC02211-204ENST00000642024 1070 ntBASIC1.76□□□□□ -2.13
UPF3BQ9BZI7 LINC02510-201ENST00000509798 1576 ntTSL 1 (best) BASIC1.76□□□□□ -2.13
UPF3BQ9BZI7 RNU6-236P-201ENST00000363886 106 ntBASIC1.75□□□□□ -2.13
UPF3BQ9BZI7 RNU1-42P-201ENST00000364033 160 ntBASIC1.75□□□□□ -2.13
UPF3BQ9BZI7 RNU6-60P-201ENST00000364792 103 ntBASIC1.75□□□□□ -2.13
UPF3BQ9BZI7 RPL22P22-201ENST00000395439 379 ntBASIC1.75□□□□□ -2.13
UPF3BQ9BZI7 RNU6-516P-201ENST00000411381 104 ntBASIC1.75□□□□□ -2.13
UPF3BQ9BZI7 BTF3P8-201ENST00000414577 526 ntBASIC1.75□□□□□ -2.13
UPF3BQ9BZI7 LINC01701-201ENST00000419614 451 ntTSL 2 BASIC1.75□□□□□ -2.13
UPF3BQ9BZI7 GS1-594A7.3-201ENST00000421585 574 ntTSL 2 BASIC1.75□□□□□ -2.13
UPF3BQ9BZI7 AL513185.2-201ENST00000425543 193 ntBASIC1.75□□□□□ -2.13
UPF3BQ9BZI7 PTGES3P4-201ENST00000426243 356 ntBASIC1.75□□□□□ -2.13
UPF3BQ9BZI7 AL354695.1-201ENST00000427935 228 ntBASIC1.75□□□□□ -2.13
UPF3BQ9BZI7 AC092634.2-201ENST00000428146 1010 ntBASIC1.75□□□□□ -2.13
UPF3BQ9BZI7 USP9YP22-201ENST00000438971 294 ntBASIC1.75□□□□□ -2.13
UPF3BQ9BZI7 RPL23AP6-201ENST00000446637 472 ntBASIC1.75□□□□□ -2.13
UPF3BQ9BZI7 RNA5SP61-201ENST00000516453 100 ntBASIC1.75□□□□□ -2.13
Retrieved 100 of 98,524 protein–RNA pairs in 121.1 ms