Protein–RNA interactions for Protein: Q9BQ65

USB1, U6 snRNA phosphodiesterase, humanhuman

Known RBP Predictions only

Length 265 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
USB1Q9BQ65 AC060780.2-201ENST00000589047 198 ntBASIC4.96□□□□□ -1.62
USB1Q9BQ65 SMIM24-204ENST00000591708 660 ntAPPRIS ALT2 TSL 2 BASIC4.96□□□□□ -1.62
USB1Q9BQ65 MIR6837-201ENST00000620884 64 ntBASIC4.96□□□□□ -1.62
USB1Q9BQ65 DLEU2_6.2-201ENST00000620994 136 ntBASIC4.96□□□□□ -1.62
USB1Q9BQ65 LINC01232-203ENST00000625369 576 ntTSL 4 BASIC4.96□□□□□ -1.62
USB1Q9BQ65 RAPGEF4-213ENST00000535187 3707 ntTSL 2 BASIC4.96□□□□□ -1.62
USB1Q9BQ65 DCLK1-204ENST00000379893 4612 ntTSL 2 BASIC4.96□□□□□ -1.62
USB1Q9BQ65 HSPA13-201ENST00000285667 3986 ntAPPRIS P1 TSL 1 (best) BASIC4.96□□□□□ -1.62
USB1Q9BQ65 MYBPC1-216ENST00000550270 3426 ntAPPRIS ALT2 TSL 5 BASIC4.96□□□□□ -1.62
USB1Q9BQ65 ZEB1-202ENST00000361642 5990 ntAPPRIS ALT2 TSL 1 (best) BASIC4.96□□□□□ -1.62
USB1Q9BQ65 DROSHA-212ENST00000511367 5305 ntAPPRIS P4 TSL 1 (best) BASIC4.96□□□□□ -1.62
USB1Q9BQ65 APAF1-205ENST00000547045 3744 ntAPPRIS ALT1 TSL 1 (best) BASIC4.96□□□□□ -1.62
USB1Q9BQ65 MYO3A-203ENST00000376302 2723 ntTSL 1 (best) BASIC4.95□□□□□ -1.62
USB1Q9BQ65 PRG4-206ENST00000635041 4915 ntAPPRIS ALT2 TSL 5 BASIC4.95□□□□□ -1.62
USB1Q9BQ65 AL445623.2-201ENST00000640307 4805 ntTSL 1 (best) BASIC4.95□□□□□ -1.62
USB1Q9BQ65 ZNF571-201ENST00000328550 4113 ntAPPRIS P1 TSL 1 (best) BASIC4.95□□□□□ -1.62
USB1Q9BQ65 PWRN2-202ENST00000567246 4295 ntTSL 1 (best) BASIC4.95□□□□□ -1.62
USB1Q9BQ65 RNU6-1048P-201ENST00000364054 107 ntBASIC4.95□□□□□ -1.62
USB1Q9BQ65 RNU6-1264P-201ENST00000383891 107 ntBASIC4.95□□□□□ -1.62
USB1Q9BQ65 SNORA22-201ENST00000383907 134 ntBASIC4.95□□□□□ -1.62
USB1Q9BQ65 RNU6-217P-201ENST00000384164 104 ntBASIC4.95□□□□□ -1.62
USB1Q9BQ65 MIR15B-201ENST00000385045 98 ntBASIC4.95□□□□□ -1.62
USB1Q9BQ65 AL355497.1-201ENST00000406262 551 ntBASIC4.95□□□□□ -1.62
USB1Q9BQ65 AC005160.1-201ENST00000432405 381 ntTSL 3 BASIC4.95□□□□□ -1.62
USB1Q9BQ65 IGKV3D-7-201ENST00000443397 384 ntAPPRIS P1 BASIC4.95□□□□□ -1.62
USB1Q9BQ65 AC012308.1-201ENST00000451232 178 ntBASIC4.95□□□□□ -1.62
USB1Q9BQ65 RN7SL51P-201ENST00000468230 285 ntBASIC4.95□□□□□ -1.62
USB1Q9BQ65 OR2AO1P-201ENST00000476497 403 ntBASIC4.95□□□□□ -1.62
USB1Q9BQ65 RNU6-107P-201ENST00000516643 102 ntBASIC4.95□□□□□ -1.62
USB1Q9BQ65 SNORA31.16-201ENST00000516773 139 ntBASIC4.95□□□□□ -1.62
USB1Q9BQ65 IGKV2-18-201ENST00000522607 343 ntBASIC4.95□□□□□ -1.62
USB1Q9BQ65 IGLV3-30-201ENST00000524362 298 ntBASIC4.95□□□□□ -1.62
USB1Q9BQ65 LINC01835-202ENST00000589345 450 ntTSL 3 BASIC4.95□□□□□ -1.62
USB1Q9BQ65 AL391903.3-201ENST00000612158 163 ntBASIC4.95□□□□□ -1.62
USB1Q9BQ65 DSCR8-208ENST00000614538 403 ntAPPRIS P5 TSL 5 BASIC4.95□□□□□ -1.62
USB1Q9BQ65 MIR6826-201ENST00000617808 98 ntBASIC4.95□□□□□ -1.62
USB1Q9BQ65 MIR6886-201ENST00000619864 61 ntBASIC4.95□□□□□ -1.62
USB1Q9BQ65 AL592430.2-201ENST00000633779 486 ntTSL 5 BASIC4.95□□□□□ -1.62
USB1Q9BQ65 HMBOX1-202ENST00000355231 1694 ntTSL 5 BASIC4.95□□□□□ -1.62
USB1Q9BQ65 SRRM1-203ENST00000447431 3691 ntAPPRIS ALT2 TSL 5 BASIC4.95□□□□□ -1.62
USB1Q9BQ65 RNF19A-205ENST00000519449 4330 ntAPPRIS P1 TSL 1 (best) BASIC4.95□□□□□ -1.62
USB1Q9BQ65 AL360270.2-201ENST00000562952 5985 ntBASIC4.95□□□□□ -1.62
USB1Q9BQ65 TRGC1-201ENST00000443402 2730 ntAPPRIS P1 BASIC4.95□□□□□ -1.62
USB1Q9BQ65 TDRD5-202ENST00000367614 3632 ntAPPRIS P3 TSL 2 BASIC4.95□□□□□ -1.62
USB1Q9BQ65 PCDH15-217ENST00000414778 9234 ntAPPRIS ALT2 TSL 5 BASIC4.95□□□□□ -1.62
USB1Q9BQ65 PCDH15-227ENST00000614895 9249 ntAPPRIS ALT2 TSL 5 BASIC4.95□□□□□ -1.62
USB1Q9BQ65 LINC01748-204ENST00000635048 5678 ntTSL 5 BASIC4.94□□□□□ -1.62
USB1Q9BQ65 AC010132.3-201ENST00000442788 2430 ntAPPRIS P5 TSL 5 BASIC4.94□□□□□ -1.62
USB1Q9BQ65 PTBP3-207ENST00000458258 7995 ntTSL 1 (best) BASIC4.94□□□□□ -1.62
USB1Q9BQ65 SDHC-202ENST00000367975 13566 ntAPPRIS P1 TSL 1 (best) BASIC4.94□□□□□ -1.62
USB1Q9BQ65 FABP12-201ENST00000360464 551 ntAPPRIS P1 TSL 1 (best) BASIC4.94□□□□□ -1.62
USB1Q9BQ65 RNU1-108P-201ENST00000362556 161 ntBASIC4.94□□□□□ -1.62
USB1Q9BQ65 SNORA68.2-201ENST00000391263 128 ntBASIC4.94□□□□□ -1.62
USB1Q9BQ65 RN7SKP229-201ENST00000410465 302 ntBASIC4.94□□□□□ -1.62
USB1Q9BQ65 AC004882.2-201ENST00000420180 244 ntTSL 5 BASIC4.94□□□□□ -1.62
USB1Q9BQ65 AC004129.2-201ENST00000457229 287 ntBASIC4.94□□□□□ -1.62
USB1Q9BQ65 RPL23AP70-201ENST00000483361 460 ntBASIC4.94□□□□□ -1.62
USB1Q9BQ65 AC123768.1-201ENST00000486285 432 ntTSL 3 BASIC4.94□□□□□ -1.62
USB1Q9BQ65 RN7SL214P-201ENST00000487317 265 ntBASIC4.94□□□□□ -1.62
USB1Q9BQ65 AC093001.1-201ENST00000489011 551 ntTSL 4 BASIC4.94□□□□□ -1.62
USB1Q9BQ65 AC020703.1-201ENST00000505051 521 ntTSL 3 BASIC4.94□□□□□ -1.62
USB1Q9BQ65 Y_RNA.712-201ENST00000517011 92 ntBASIC4.94□□□□□ -1.62
USB1Q9BQ65 AP004242.1-201ENST00000533701 349 ntBASIC4.94□□□□□ -1.62
USB1Q9BQ65 SUMO2P15-201ENST00000604285 278 ntBASIC4.94□□□□□ -1.62
USB1Q9BQ65 AC243585.1-201ENST00000617867 607 ntTSL 3 BASIC4.94□□□□□ -1.62
USB1Q9BQ65 ZNF248-201ENST00000357328 4795 ntAPPRIS P1 TSL 2 BASIC4.94□□□□□ -1.62
USB1Q9BQ65 R3HCC1L-202ENST00000314594 3198 ntAPPRIS P1 TSL 5 BASIC4.94□□□□□ -1.62
USB1Q9BQ65 LINC00630-205ENST00000440496 2101 ntTSL 1 (best) BASIC4.94□□□□□ -1.62
USB1Q9BQ65 DDX58-201ENST00000379868 4089 ntTSL 5 BASIC4.94□□□□□ -1.62
USB1Q9BQ65 AC011900.1-201ENST00000446838 2999 ntTSL 1 (best) BASIC4.94□□□□□ -1.62
USB1Q9BQ65 ORC4-215ENST00000536575 6328 ntTSL 2 BASIC4.94□□□□□ -1.62
USB1Q9BQ65 MAPK10-304ENST00000641341 3984 ntBASIC4.94□□□□□ -1.62
USB1Q9BQ65 ZNF83-203ENST00000541777 3743 ntAPPRIS P1 TSL 1 (best) BASIC4.94□□□□□ -1.62
USB1Q9BQ65 ADAM18-202ENST00000379866 2314 ntAPPRIS ALT2 TSL 1 (best) BASIC4.94□□□□□ -1.62
USB1Q9BQ65 ZMAT1-201ENST00000372782 3185 ntAPPRIS P1 TSL 1 (best) BASIC4.94□□□□□ -1.62
USB1Q9BQ65 VPS50-202ENST00000305866 3613 ntAPPRIS P1 TSL 1 (best) BASIC4.93□□□□□ -1.62
USB1Q9BQ65 DMTF1-204ENST00000413276 3548 ntTSL 5 BASIC4.93□□□□□ -1.62
USB1Q9BQ65 ZNF702P-202ENST00000434269 1966 ntBASIC4.93□□□□□ -1.62
USB1Q9BQ65 ZNF284-201ENST00000421176 4351 ntAPPRIS P1 TSL 1 (best) BASIC4.93□□□□□ -1.62
USB1Q9BQ65 ZBED6-201ENST00000545588 7979 ntTSL 1 (best) BASIC4.93□□□□□ -1.62
USB1Q9BQ65 ACSL5-202ENST00000354655 3351 ntAPPRIS P1 TSL 2 BASIC4.93□□□□□ -1.62
USB1Q9BQ65 RNU6-1280P-201ENST00000365211 107 ntBASIC4.93□□□□□ -1.62
USB1Q9BQ65 MPDZ-204ENST00000381022 7589 ntAPPRIS ALT2 TSL 5 BASIC4.93□□□□□ -1.62
USB1Q9BQ65 MIR130A-201ENST00000385274 89 ntBASIC4.93□□□□□ -1.62
USB1Q9BQ65 AL031003.1-201ENST00000404229 172 ntBASIC4.93□□□□□ -1.62
USB1Q9BQ65 RNU6-710P-201ENST00000410424 105 ntBASIC4.93□□□□□ -1.62
USB1Q9BQ65 AC245028.1-201ENST00000423259 256 ntBASIC4.93□□□□□ -1.62
USB1Q9BQ65 AL360175.1-201ENST00000426547 285 ntTSL 5 BASIC4.93□□□□□ -1.62
USB1Q9BQ65 TMEM183AP1-205ENST00000432739 290 ntBASIC4.93□□□□□ -1.62
USB1Q9BQ65 AC112715.1-201ENST00000445534 350 ntTSL 3 BASIC4.93□□□□□ -1.62
USB1Q9BQ65 RAP1GDS1-206ENST00000453712 2470 ntAPPRIS ALT1 TSL 1 (best) BASIC4.93□□□□□ -1.62
USB1Q9BQ65 ADAM3A-203ENST00000461344 2157 ntBASIC4.93□□□□□ -1.62
USB1Q9BQ65 AC117394.2-201ENST00000487827 323 ntTSL 3 BASIC4.93□□□□□ -1.62
USB1Q9BQ65 RPL36AP41-201ENST00000493820 306 ntBASIC4.93□□□□□ -1.62
USB1Q9BQ65 RNU5E-3P-201ENST00000515913 68 ntBASIC4.93□□□□□ -1.62
USB1Q9BQ65 RPL23AP53-201ENST00000521854 457 ntBASIC4.93□□□□□ -1.62
USB1Q9BQ65 LINC02277-202ENST00000556472 453 ntTSL 3 BASIC4.93□□□□□ -1.62
USB1Q9BQ65 AC134312.3-201ENST00000566155 213 ntTSL 2 BASIC4.93□□□□□ -1.62
USB1Q9BQ65 MTND5P34-201ENST00000568888 325 ntBASIC4.93□□□□□ -1.62
USB1Q9BQ65 AC009163.5-201ENST00000575421 637 ntBASIC4.93□□□□□ -1.62
Retrieved 100 of 98,524 protein–RNA pairs in 109.8 ms