Protein–RNA interactions for Protein: Q96MX3

ZNF48, Zinc finger protein 48, humanhuman

Predicted RBP Predictions only

Length 618 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ZNF48Q96MX3 AC087884.1-201ENST00000469738 328 ntBASIC3.28□□□□□ -1.88
ZNF48Q96MX3 OARD1-209ENST00000471367 401 ntTSL 2 BASIC3.28□□□□□ -1.88
ZNF48Q96MX3 AC107222.1-201ENST00000510899 637 ntBASIC3.28□□□□□ -1.88
ZNF48Q96MX3 AC026801.2-201ENST00000515352 425 ntBASIC3.28□□□□□ -1.88
ZNF48Q96MX3 RNU6-120P-201ENST00000516077 103 ntBASIC3.28□□□□□ -1.88
ZNF48Q96MX3 SNORD116.3-201ENST00000517176 78 ntBASIC3.28□□□□□ -1.88
ZNF48Q96MX3 PKIA-203ENST00000518467 588 ntAPPRIS P1 TSL 1 (best) BASIC3.28□□□□□ -1.88
ZNF48Q96MX3 HMGN1P28-201ENST00000521340 364 ntBASIC3.28□□□□□ -1.88
ZNF48Q96MX3 AC093331.1-201ENST00000521474 169 ntBASIC3.28□□□□□ -1.88
ZNF48Q96MX3 AC025272.1-201ENST00000569661 483 ntTSL 2 BASIC3.28□□□□□ -1.88
ZNF48Q96MX3 AL589765.7-201ENST00000601684 629 ntTSL 3 BASIC3.28□□□□□ -1.88
ZNF48Q96MX3 AL109918.3-201ENST00000603072 338 ntBASIC3.28□□□□□ -1.88
ZNF48Q96MX3 HMGB1P24-202ENST00000615653 685 ntBASIC3.28□□□□□ -1.88
ZNF48Q96MX3 DLEU1_1.1-201ENST00000618107 190 ntBASIC3.28□□□□□ -1.88
ZNF48Q96MX3 MPP6-209ENST00000625307 126 ntTSL 5 BASIC3.28□□□□□ -1.88
ZNF48Q96MX3 AC012442.3-202ENST00000636742 206 ntBASIC3.28□□□□□ -1.88
ZNF48Q96MX3 ZNF594-201ENST00000399604 4862 ntAPPRIS P1 BASIC3.28□□□□□ -1.88
ZNF48Q96MX3 AC116096.1-201ENST00000566804 2314 ntBASIC3.28□□□□□ -1.88
ZNF48Q96MX3 RMDN2-205ENST00000407257 2280 ntTSL 5 BASIC3.28□□□□□ -1.88
ZNF48Q96MX3 GEN1-201ENST00000317402 9854 ntAPPRIS P1 TSL 2 BASIC3.28□□□□□ -1.88
ZNF48Q96MX3 VEPH1-203ENST00000392833 3979 ntTSL 1 (best) BASIC3.28□□□□□ -1.88
ZNF48Q96MX3 ZNF85-201ENST00000300540 1531 ntTSL 1 (best) BASIC3.28□□□□□ -1.88
ZNF48Q96MX3 PTP4A1-205ENST00000626021 2203 ntAPPRIS P1 TSL 1 (best) BASIC3.27□□□□□ -1.89
ZNF48Q96MX3 AC087521.2-201ENST00000499066 2190 ntTSL 2 BASIC3.27□□□□□ -1.89
ZNF48Q96MX3 PHEX-201ENST00000379374 6172 ntAPPRIS P1 TSL 1 (best) BASIC3.27□□□□□ -1.89
ZNF48Q96MX3 Y_RNA.307-201ENST00000365022 117 ntBASIC3.27□□□□□ -1.89
ZNF48Q96MX3 Y_RNA.389-201ENST00000383924 113 ntBASIC3.27□□□□□ -1.89
ZNF48Q96MX3 RNU6-213P-201ENST00000384051 104 ntBASIC3.27□□□□□ -1.89
ZNF48Q96MX3 Y_RNA.428-201ENST00000384078 102 ntBASIC3.27□□□□□ -1.89
ZNF48Q96MX3 RNU6-434P-201ENST00000384376 107 ntBASIC3.27□□□□□ -1.89
ZNF48Q96MX3 TRAV9-2-201ENST00000390441 394 ntAPPRIS P1 BASIC3.27□□□□□ -1.89
ZNF48Q96MX3 RNU6-1109P-201ENST00000391187 107 ntBASIC3.27□□□□□ -1.89
ZNF48Q96MX3 RNU4-65P-201ENST00000410473 140 ntBASIC3.27□□□□□ -1.89
ZNF48Q96MX3 AC099677.1-201ENST00000420575 175 ntBASIC3.27□□□□□ -1.89
ZNF48Q96MX3 AC243428.1-201ENST00000421099 264 ntBASIC3.27□□□□□ -1.89
ZNF48Q96MX3 USMG5P1-201ENST00000425964 177 ntBASIC3.27□□□□□ -1.89
ZNF48Q96MX3 AL358472.1-201ENST00000431295 329 ntBASIC3.27□□□□□ -1.89
ZNF48Q96MX3 AL591212.2-201ENST00000433923 257 ntBASIC3.27□□□□□ -1.89
ZNF48Q96MX3 PLCB1-IT1-201ENST00000441231 373 ntTSL 3 BASIC3.27□□□□□ -1.89
ZNF48Q96MX3 LINC01510-201ENST00000441991 468 ntTSL 3 BASIC3.27□□□□□ -1.89
ZNF48Q96MX3 MTCO3P45-201ENST00000443036 613 ntBASIC3.27□□□□□ -1.89
ZNF48Q96MX3 AL121760.1-201ENST00000447206 346 ntTSL 2 BASIC3.27□□□□□ -1.89
ZNF48Q96MX3 AL162389.1-201ENST00000449233 177 ntBASIC3.27□□□□□ -1.89
ZNF48Q96MX3 RPS11P1-201ENST00000451072 473 ntBASIC3.27□□□□□ -1.89
ZNF48Q96MX3 snoU109.4-201ENST00000458953 143 ntBASIC3.27□□□□□ -1.89
ZNF48Q96MX3 AC008481.1-201ENST00000463278 396 ntBASIC3.27□□□□□ -1.89
ZNF48Q96MX3 RN7SL271P-201ENST00000487601 295 ntBASIC3.27□□□□□ -1.89
ZNF48Q96MX3 AC104564.1-201ENST00000493028 407 ntBASIC3.27□□□□□ -1.89
ZNF48Q96MX3 AC026801.1-201ENST00000497178 464 ntBASIC3.27□□□□□ -1.89
ZNF48Q96MX3 AC025554.1-201ENST00000505641 188 ntBASIC3.27□□□□□ -1.89
ZNF48Q96MX3 AC022493.2-201ENST00000506122 481 ntBASIC3.27□□□□□ -1.89
ZNF48Q96MX3 AC025244.2-201ENST00000509215 422 ntTSL 3 BASIC3.27□□□□□ -1.89
ZNF48Q96MX3 AC114316.1-201ENST00000511323 278 ntTSL 5 BASIC3.27□□□□□ -1.89
ZNF48Q96MX3 AC010265.1-201ENST00000513509 211 ntBASIC3.27□□□□□ -1.89
ZNF48Q96MX3 RNU1-61P-201ENST00000516107 151 ntBASIC3.27□□□□□ -1.89
ZNF48Q96MX3 SCARNA16.2-201ENST00000516520 172 ntBASIC3.27□□□□□ -1.89
ZNF48Q96MX3 RNU6-388P-201ENST00000517012 105 ntBASIC3.27□□□□□ -1.89
ZNF48Q96MX3 RNU6-389P-201ENST00000517048 105 ntBASIC3.27□□□□□ -1.89
ZNF48Q96MX3 AC104393.1-201ENST00000517495 255 ntTSL 3 BASIC3.27□□□□□ -1.89
ZNF48Q96MX3 RNU6-323P-201ENST00000521915 107 ntBASIC3.27□□□□□ -1.89
ZNF48Q96MX3 AC023442.3-203ENST00000530946 533 ntTSL 4 BASIC3.27□□□□□ -1.89
ZNF48Q96MX3 AC084398.2-201ENST00000551918 564 ntTSL 4 BASIC3.27□□□□□ -1.89
ZNF48Q96MX3 C18orf54-203ENST00000578138 776 ntTSL 3 BASIC3.27□□□□□ -1.89
ZNF48Q96MX3 MIR4474-201ENST00000579189 78 ntBASIC3.27□□□□□ -1.89
ZNF48Q96MX3 AC011494.1-201ENST00000596454 237 ntBASIC3.27□□□□□ -1.89
ZNF48Q96MX3 TUG1_2.1-201ENST00000614234 87 ntBASIC3.27□□□□□ -1.89
ZNF48Q96MX3 AL121772.2-201ENST00000614331 297 ntBASIC3.27□□□□□ -1.89
ZNF48Q96MX3 AL355810.1-201ENST00000614629 552 ntBASIC3.27□□□□□ -1.89
ZNF48Q96MX3 AC015967.1-201ENST00000619893 476 ntBASIC3.27□□□□□ -1.89
ZNF48Q96MX3 AL354798.1-201ENST00000622505 329 ntBASIC3.27□□□□□ -1.89
ZNF48Q96MX3 CCT7-217ENST00000626868 249 ntTSL 5 BASIC3.27□□□□□ -1.89
ZNF48Q96MX3 LIG4-201ENST00000356922 4096 ntAPPRIS P1 TSL 1 (best) BASIC3.27□□□□□ -1.89
ZNF48Q96MX3 EMSY-210ENST00000529032 6848 ntAPPRIS P3 TSL 1 (best) BASIC3.27□□□□□ -1.89
ZNF48Q96MX3 NDST3-201ENST00000296499 5961 ntAPPRIS P1 TSL 1 (best) BASIC3.27□□□□□ -1.89
ZNF48Q96MX3 DST-201ENST00000244364 16742 ntTSL 1 (best) BASIC3.27□□□□□ -1.89
ZNF48Q96MX3 MAPK10-373ENST00000641983 6772 ntBASIC3.27□□□□□ -1.89
ZNF48Q96MX3 SERPINA7-201ENST00000327674 2642 ntAPPRIS P1 TSL 1 (best) BASIC3.26□□□□□ -1.89
ZNF48Q96MX3 ZMYND11-217ENST00000627286 3914 ntTSL 5 BASIC3.26□□□□□ -1.89
ZNF48Q96MX3 DOCK7-218ENST00000635123 6297 ntAPPRIS ALT2 TSL 5 BASIC3.26□□□□□ -1.89
ZNF48Q96MX3 SNORA60-201ENST00000362396 134 ntBASIC3.26□□□□□ -1.89
ZNF48Q96MX3 SNORD62.1-201ENST00000362541 86 ntBASIC3.26□□□□□ -1.89
ZNF48Q96MX3 Y_RNA.257-201ENST00000364596 102 ntBASIC3.26□□□□□ -1.89
ZNF48Q96MX3 RNU6-306P-201ENST00000384617 107 ntBASIC3.26□□□□□ -1.89
ZNF48Q96MX3 AL590704.1-201ENST00000402856 794 ntBASIC3.26□□□□□ -1.89
ZNF48Q96MX3 RNU2-3P-201ENST00000410144 191 ntBASIC3.26□□□□□ -1.89
ZNF48Q96MX3 Z99755.1-201ENST00000414048 380 ntBASIC3.26□□□□□ -1.89
ZNF48Q96MX3 AL355989.1-202ENST00000419406 408 ntTSL 3 BASIC3.26□□□□□ -1.89
ZNF48Q96MX3 TRAPPC2P4-201ENST00000421750 331 ntBASIC3.26□□□□□ -1.89
ZNF48Q96MX3 AC006946.1-201ENST00000429106 328 ntBASIC3.26□□□□□ -1.89
ZNF48Q96MX3 AL139397.1-201ENST00000430456 644 ntTSL 2 BASIC3.26□□□□□ -1.89
ZNF48Q96MX3 USP9YP30-201ENST00000430729 455 ntBASIC3.26□□□□□ -1.89
ZNF48Q96MX3 PLCE1-AS2-203ENST00000433038 396 ntTSL 2 BASIC3.26□□□□□ -1.89
ZNF48Q96MX3 IGKV3D-7-201ENST00000443397 384 ntAPPRIS P1 BASIC3.26□□□□□ -1.89
ZNF48Q96MX3 NOTCH2P1-201ENST00000443481 624 ntBASIC3.26□□□□□ -1.89
ZNF48Q96MX3 AL133547.1-201ENST00000448546 220 ntBASIC3.26□□□□□ -1.89
ZNF48Q96MX3 FABP5P13-201ENST00000452144 328 ntBASIC3.26□□□□□ -1.89
ZNF48Q96MX3 AC092422.1-201ENST00000455576 584 ntTSL 4 BASIC3.26□□□□□ -1.89
ZNF48Q96MX3 RPS23P3-201ENST00000470993 430 ntBASIC3.26□□□□□ -1.89
ZNF48Q96MX3 AC010631.1-201ENST00000474150 156 ntBASIC3.26□□□□□ -1.89
ZNF48Q96MX3 LINC01969-201ENST00000514468 455 ntTSL 3 BASIC3.26□□□□□ -1.89
Retrieved 100 of 98,524 protein–RNA pairs in 111.5 ms