Protein–RNA interactions for Protein: Q96M19

LINC00477, Putative transmembrane protein encoded by LINC00477, humanhuman

Predictions only

Length 166 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00477Q96M19 AC000123.1-201ENST00000418215 516 ntTSL 5 BASIC1.84□□□□□ -2.11
LINC00477Q96M19 AL445123.1-201ENST00000422023 446 ntTSL 2 BASIC1.84□□□□□ -2.11
LINC00477Q96M19 AL592045.1-201ENST00000429867 352 ntBASIC1.84□□□□□ -2.11
LINC00477Q96M19 ARL5AP4-201ENST00000430731 512 ntBASIC1.84□□□□□ -2.11
LINC00477Q96M19 AC020571.1-201ENST00000430904 768 ntTSL 2 BASIC1.84□□□□□ -2.11
LINC00477Q96M19 USP12PX-201ENST00000432383 1057 ntBASIC1.84□□□□□ -2.11
LINC00477Q96M19 Z82210.1-201ENST00000440037 231 ntBASIC1.84□□□□□ -2.11
LINC00477Q96M19 LINC01828-202ENST00000450294 955 ntTSL 5 BASIC1.84□□□□□ -2.11
LINC00477Q96M19 AC108059.3-201ENST00000456388 214 ntBASIC1.84□□□□□ -2.11
LINC00477Q96M19 SNORD109B-201ENST00000458961 67 ntBASIC1.84□□□□□ -2.11
LINC00477Q96M19 SNORD109A-201ENST00000459128 67 ntBASIC1.84□□□□□ -2.11
LINC00477Q96M19 KLF3P2-201ENST00000465138 268 ntBASIC1.84□□□□□ -2.11
LINC00477Q96M19 RPS20P22-201ENST00000473700 357 ntBASIC1.84□□□□□ -2.11
LINC00477Q96M19 RPL23AP41-201ENST00000484754 458 ntBASIC1.84□□□□□ -2.11
LINC00477Q96M19 SRI-210ENST00000490437 570 ntTSL 2 BASIC1.84□□□□□ -2.11
LINC00477Q96M19 AC025475.1-201ENST00000512939 487 ntTSL 3 BASIC1.84□□□□□ -2.11
LINC00477Q96M19 AC124854.1-202ENST00000513779 339 ntTSL 3 BASIC1.84□□□□□ -2.11
LINC00477Q96M19 RNU6-927P-201ENST00000516199 100 ntBASIC1.84□□□□□ -2.11
LINC00477Q96M19 RNA5SP402-201ENST00000517148 110 ntBASIC1.84□□□□□ -2.11
LINC00477Q96M19 AF117829.1-203ENST00000520306 421 ntTSL 5 BASIC1.84□□□□□ -2.11
LINC00477Q96M19 AC093012.1-202ENST00000549403 582 ntBASIC1.84□□□□□ -2.11
LINC00477Q96M19 AL391261.3-201ENST00000557194 520 ntBASIC1.84□□□□□ -2.11
LINC00477Q96M19 AC012213.3-201ENST00000577199 777 ntBASIC1.84□□□□□ -2.11
LINC00477Q96M19 MIR5694-201ENST00000581190 76 ntBASIC1.84□□□□□ -2.11
LINC00477Q96M19 AC004805.2-201ENST00000605382 482 ntBASIC1.84□□□□□ -2.11
LINC00477Q96M19 AC087752.4-201ENST00000605911 462 ntBASIC1.84□□□□□ -2.11
LINC00477Q96M19 AC103591.3-201ENST00000608684 209 ntBASIC1.84□□□□□ -2.11
LINC00477Q96M19 DPY19L1-208ENST00000612226 607 ntTSL 1 (best) BASIC1.84□□□□□ -2.11
LINC00477Q96M19 MALAT1-206ENST00000612781 234 ntTSL 3 BASIC1.84□□□□□ -2.11
LINC00477Q96M19 AC008498.1-201ENST00000613012 531 ntBASIC1.84□□□□□ -2.11
LINC00477Q96M19 C20orf24-208ENST00000639924 351 ntTSL 5 BASIC1.84□□□□□ -2.11
LINC00477Q96M19 RRAS2-211ENST00000537760 2034 ntTSL 2 BASIC1.84□□□□□ -2.12
LINC00477Q96M19 RTL4-201ENST00000340433 2613 ntAPPRIS P1 BASIC1.83□□□□□ -2.12
LINC00477Q96M19 ARHGAP5-202ENST00000345122 9604 ntAPPRIS P3 TSL 5 BASIC1.83□□□□□ -2.12
LINC00477Q96M19 Y_RNA.41-201ENST00000362646 102 ntBASIC1.83□□□□□ -2.12
LINC00477Q96M19 RNU6-1167P-201ENST00000363227 94 ntBASIC1.83□□□□□ -2.12
LINC00477Q96M19 RNU6-1284P-201ENST00000363701 100 ntBASIC1.83□□□□□ -2.12
LINC00477Q96M19 RNU1-51P-201ENST00000365345 176 ntBASIC1.83□□□□□ -2.12
LINC00477Q96M19 SNORA4.3-201ENST00000365564 137 ntBASIC1.83□□□□□ -2.12
LINC00477Q96M19 Y_RNA.381-201ENST00000365666 102 ntBASIC1.83□□□□□ -2.12
LINC00477Q96M19 RNU6-946P-201ENST00000383878 107 ntBASIC1.83□□□□□ -2.12
LINC00477Q96M19 RNU6-140P-201ENST00000384566 108 ntBASIC1.83□□□□□ -2.12
LINC00477Q96M19 CTNNA2-204ENST00000409266 432 ntTSL 3 BASIC1.83□□□□□ -2.12
LINC00477Q96M19 AC008440.2-201ENST00000413496 423 ntTSL 5 BASIC1.83□□□□□ -2.12
LINC00477Q96M19 AC009158.1-206ENST00000417476 454 ntTSL 3 BASIC1.83□□□□□ -2.12
LINC00477Q96M19 MORF4L1P6-201ENST00000418771 268 ntBASIC1.83□□□□□ -2.12
LINC00477Q96M19 AC063976.3-201ENST00000426849 329 ntBASIC1.83□□□□□ -2.12
LINC00477Q96M19 AC006946.1-201ENST00000429106 328 ntBASIC1.83□□□□□ -2.12
LINC00477Q96M19 PCYT1B-AS1-201ENST00000432626 275 ntTSL 2 BASIC1.83□□□□□ -2.12
LINC00477Q96M19 MTATP6P16-201ENST00000434543 526 ntBASIC1.83□□□□□ -2.12
LINC00477Q96M19 AC107083.1-201ENST00000439643 279 ntBASIC1.83□□□□□ -2.12
LINC00477Q96M19 NEFMP1-201ENST00000443423 1006 ntBASIC1.83□□□□□ -2.12
LINC00477Q96M19 AL138830.2-202ENST00000446358 786 ntTSL 2 BASIC1.83□□□□□ -2.12
LINC00477Q96M19 AC005703.2-201ENST00000453339 343 ntTSL 2 BASIC1.83□□□□□ -2.12
LINC00477Q96M19 FABP5P15-201ENST00000453566 214 ntBASIC1.83□□□□□ -2.12
LINC00477Q96M19 RNU6-956P-201ENST00000458868 103 ntBASIC1.83□□□□□ -2.12
LINC00477Q96M19 ARL2BPP4-201ENST00000506854 471 ntBASIC1.83□□□□□ -2.12
LINC00477Q96M19 RBBP4P6-201ENST00000508098 202 ntBASIC1.83□□□□□ -2.12
LINC00477Q96M19 MTCO3P7-201ENST00000510008 774 ntBASIC1.83□□□□□ -2.12
LINC00477Q96M19 AC087439.1-201ENST00000517920 398 ntTSL 3 BASIC1.83□□□□□ -2.12
LINC00477Q96M19 CDKL3-207ENST00000521755 586 ntTSL 5 BASIC1.83□□□□□ -2.12
LINC00477Q96M19 CYCSP26-201ENST00000534107 320 ntBASIC1.83□□□□□ -2.12
LINC00477Q96M19 AC087241.2-201ENST00000535801 324 ntBASIC1.83□□□□□ -2.12
LINC00477Q96M19 AC073591.1-201ENST00000552736 597 ntTSL 3 BASIC1.83□□□□□ -2.12
LINC00477Q96M19 AC107023.1-201ENST00000552757 356 ntTSL 5 BASIC1.83□□□□□ -2.12
LINC00477Q96M19 LINC02461-201ENST00000553211 836 ntTSL 3 BASIC1.83□□□□□ -2.12
LINC00477Q96M19 AC044798.1-201ENST00000565146 418 ntTSL 5 BASIC1.83□□□□□ -2.12
LINC00477Q96M19 AC010547.2-201ENST00000568523 409 ntTSL 5 BASIC1.83□□□□□ -2.12
LINC00477Q96M19 RPS3AP23-202ENST00000574601 686 ntBASIC1.83□□□□□ -2.12
LINC00477Q96M19 AC091043.1-201ENST00000579830 453 ntTSL 3 BASIC1.83□□□□□ -2.12
LINC00477Q96M19 AC005304.3-201ENST00000581533 511 ntTSL 3 BASIC1.83□□□□□ -2.12
LINC00477Q96M19 AC096708.3-201ENST00000584226 559 ntTSL 2 BASIC1.83□□□□□ -2.12
LINC00477Q96M19 AL161729.4-201ENST00000604650 476 ntBASIC1.83□□□□□ -2.12
LINC00477Q96M19 AL022154.1-201ENST00000604698 785 ntBASIC1.83□□□□□ -2.12
LINC00477Q96M19 AP002360.4-201ENST00000606980 481 ntBASIC1.83□□□□□ -2.12
LINC00477Q96M19 AC004908.3-201ENST00000610248 625 ntBASIC1.83□□□□□ -2.12
LINC00477Q96M19 AL445584.2-201ENST00000614030 616 ntTSL 5 BASIC1.83□□□□□ -2.12
LINC00477Q96M19 AC009090.3-201ENST00000616553 565 ntBASIC1.83□□□□□ -2.12
LINC00477Q96M19 AC048344.4-201ENST00000619744 527 ntBASIC1.83□□□□□ -2.12
LINC00477Q96M19 AC093648.1-201ENST00000623546 606 ntBASIC1.83□□□□□ -2.12
LINC00477Q96M19 AC012640.5-201ENST00000623897 319 ntBASIC1.83□□□□□ -2.12
LINC00477Q96M19 SRP54-214ENST00000630962 162 ntTSL 5 BASIC1.83□□□□□ -2.12
LINC00477Q96M19 PAPOLA-202ENST00000392990 2588 ntTSL 5 BASIC1.83□□□□□ -2.12
LINC00477Q96M19 MTND4P27-201ENST00000450813 1354 ntBASIC1.83□□□□□ -2.12
LINC00477Q96M19 WWP1-201ENST00000265428 3362 ntAPPRIS P1 TSL 1 (best) BASIC1.82□□□□□ -2.12
LINC00477Q96M19 EDDM3A-201ENST00000326842 927 ntAPPRIS P1 TSL 1 (best) BASIC1.82□□□□□ -2.12
LINC00477Q96M19 RNU6-223P-201ENST00000362830 107 ntBASIC1.82□□□□□ -2.12
LINC00477Q96M19 RNU6-884P-201ENST00000363889 107 ntBASIC1.82□□□□□ -2.12
LINC00477Q96M19 MIR1-2-201ENST00000384961 85 ntBASIC1.82□□□□□ -2.12
LINC00477Q96M19 RNU6-278P-201ENST00000390945 109 ntBASIC1.82□□□□□ -2.12
LINC00477Q96M19 AL139039.1-201ENST00000401900 692 ntBASIC1.82□□□□□ -2.12
LINC00477Q96M19 AC127391.1-201ENST00000411737 98 ntBASIC1.82□□□□□ -2.12
LINC00477Q96M19 ZNF90P2-204ENST00000419323 1075 ntBASIC1.82□□□□□ -2.12
LINC00477Q96M19 LINC01780-201ENST00000420059 442 ntTSL 2 BASIC1.82□□□□□ -2.12
LINC00477Q96M19 AC092660.1-201ENST00000420648 371 ntTSL 2 BASIC1.82□□□□□ -2.12
LINC00477Q96M19 AL157884.2-201ENST00000424177 551 ntTSL 3 BASIC1.82□□□□□ -2.12
LINC00477Q96M19 AC104651.1-201ENST00000427559 735 ntBASIC1.82□□□□□ -2.12
LINC00477Q96M19 ELOCP14-201ENST00000428070 331 ntBASIC1.82□□□□□ -2.12
LINC00477Q96M19 AL024508.1-201ENST00000432477 505 ntTSL 2 BASIC1.82□□□□□ -2.12
LINC00477Q96M19 RPS24P1-201ENST00000438550 371 ntBASIC1.82□□□□□ -2.12
Retrieved 100 of 98,524 protein–RNA pairs in 123.9 ms