Protein–RNA interactions for Protein: Q96LD4

TRIM47, Tripartite motif-containing protein 47, humanhuman

Predictions only

Length 638 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM47Q96LD4 HNMT-202ENST00000280097 3295 ntAPPRIS P1 TSL 1 (best) BASIC5.39□□□□□ -1.55
TRIM47Q96LD4 C6-201ENST00000263413 3661 ntAPPRIS P1 TSL 1 (best) BASIC5.39□□□□□ -1.55
TRIM47Q96LD4 RAP1B-201ENST00000250559 13438 ntAPPRIS P1 TSL 1 (best) BASIC5.39□□□□□ -1.55
TRIM47Q96LD4 ERGIC2-201ENST00000360150 5014 ntAPPRIS P1 TSL 1 (best) BASIC5.39□□□□□ -1.55
TRIM47Q96LD4 PALMD-205ENST00000615664 1844 ntTSL 5 BASIC5.39□□□□□ -1.55
TRIM47Q96LD4 USP44-201ENST00000258499 4022 ntAPPRIS P1 TSL 1 (best) BASIC5.39□□□□□ -1.55
TRIM47Q96LD4 TRIM69-201ENST00000329464 1901 ntAPPRIS P1 TSL 1 (best) BASIC5.38□□□□□ -1.55
TRIM47Q96LD4 PDE10A-201ENST00000366882 8233 ntAPPRIS P3 TSL 5 BASIC5.38□□□□□ -1.55
TRIM47Q96LD4 LINGO2-201ENST00000308675 3031 ntAPPRIS P1 TSL 5 BASIC5.38□□□□□ -1.55
TRIM47Q96LD4 CFAP70-201ENST00000310715 3703 ntAPPRIS P1 TSL 5 BASIC5.38□□□□□ -1.55
TRIM47Q96LD4 Y_RNA.121-201ENST00000363309 113 ntBASIC5.38□□□□□ -1.55
TRIM47Q96LD4 RN7SKP224-201ENST00000364140 325 ntBASIC5.38□□□□□ -1.55
TRIM47Q96LD4 MIR578-201ENST00000384828 96 ntBASIC5.38□□□□□ -1.55
TRIM47Q96LD4 RNA5SP171-201ENST00000391071 115 ntBASIC5.38□□□□□ -1.55
TRIM47Q96LD4 LINC02337-201ENST00000401043 374 ntTSL 3 BASIC5.38□□□□□ -1.55
TRIM47Q96LD4 MIR1271-201ENST00000408537 86 ntBASIC5.38□□□□□ -1.55
TRIM47Q96LD4 RPS12P23-201ENST00000419579 400 ntBASIC5.38□□□□□ -1.55
TRIM47Q96LD4 RPS29P17-201ENST00000430795 166 ntBASIC5.38□□□□□ -1.55
TRIM47Q96LD4 AC090617.2-201ENST00000433167 404 ntTSL 3 BASIC5.38□□□□□ -1.55
TRIM47Q96LD4 AL136084.2-202ENST00000433997 353 ntTSL 2 BASIC5.38□□□□□ -1.55
TRIM47Q96LD4 GSTA9P-202ENST00000448991 521 ntTSL 3 BASIC5.38□□□□□ -1.55
TRIM47Q96LD4 RNU7-107P-201ENST00000459121 61 ntBASIC5.38□□□□□ -1.55
TRIM47Q96LD4 AC073901.1-201ENST00000462471 408 ntBASIC5.38□□□□□ -1.55
TRIM47Q96LD4 RPL36AP41-201ENST00000493820 306 ntBASIC5.38□□□□□ -1.55
TRIM47Q96LD4 AC008948.1-201ENST00000506058 325 ntTSL 2 BASIC5.38□□□□□ -1.55
TRIM47Q96LD4 RNU7-175P-201ENST00000515915 61 ntBASIC5.38□□□□□ -1.55
TRIM47Q96LD4 RNU6-352P-201ENST00000516908 107 ntBASIC5.38□□□□□ -1.55
TRIM47Q96LD4 AC025871.1-201ENST00000523935 443 ntTSL 2 BASIC5.38□□□□□ -1.55
TRIM47Q96LD4 AC021713.1-201ENST00000526554 510 ntTSL 1 (best) BASIC5.38□□□□□ -1.55
TRIM47Q96LD4 SNORA74C-1-201ENST00000580726 201 ntBASIC5.38□□□□□ -1.55
TRIM47Q96LD4 MIR4423-201ENST00000580922 80 ntBASIC5.38□□□□□ -1.55
TRIM47Q96LD4 IGKV2OR2-2-201ENST00000605025 300 ntBASIC5.38□□□□□ -1.55
TRIM47Q96LD4 TUG1_2.1-201ENST00000614234 87 ntBASIC5.38□□□□□ -1.55
TRIM47Q96LD4 AL023881.1-201ENST00000621088 301 ntBASIC5.38□□□□□ -1.55
TRIM47Q96LD4 AC092650.1-201ENST00000447571 1808 ntTSL 1 (best) BASIC5.38□□□□□ -1.55
TRIM47Q96LD4 RASAL2-203ENST00000462775 14453 ntAPPRIS ALT2 TSL 1 (best) BASIC5.38□□□□□ -1.55
TRIM47Q96LD4 TDRD3-204ENST00000377894 2484 ntTSL 2 BASIC5.38□□□□□ -1.55
TRIM47Q96LD4 TRIQK-214ENST00000521988 3672 ntAPPRIS P1 TSL 1 (best) BASIC5.38□□□□□ -1.55
TRIM47Q96LD4 TLK1-212ENST00000521943 2605 ntTSL 2 BASIC5.38□□□□□ -1.55
TRIM47Q96LD4 TUSC7-203ENST00000477539 2415 ntTSL 1 (best) BASIC5.37□□□□□ -1.55
TRIM47Q96LD4 TRAV9-2-201ENST00000390441 394 ntAPPRIS P1 BASIC5.37□□□□□ -1.55
TRIM47Q96LD4 RNU4-65P-201ENST00000410473 140 ntBASIC5.37□□□□□ -1.55
TRIM47Q96LD4 H2AFZP5-201ENST00000446960 382 ntBASIC5.37□□□□□ -1.55
TRIM47Q96LD4 snoU13.22-201ENST00000459428 104 ntBASIC5.37□□□□□ -1.55
TRIM47Q96LD4 LINC02017-201ENST00000496829 474 ntTSL 3 BASIC5.37□□□□□ -1.55
TRIM47Q96LD4 RNU6-709P-201ENST00000517257 104 ntBASIC5.37□□□□□ -1.55
TRIM47Q96LD4 NDST1-AS1-201ENST00000519040 368 ntTSL 2 BASIC5.37□□□□□ -1.55
TRIM47Q96LD4 AC093249.4-201ENST00000564755 259 ntBASIC5.37□□□□□ -1.55
TRIM47Q96LD4 AC006130.2-201ENST00000586202 326 ntBASIC5.37□□□□□ -1.55
TRIM47Q96LD4 AC004852.3-201ENST00000614131 326 ntBASIC5.37□□□□□ -1.55
TRIM47Q96LD4 CT45A5-202ENST00000617203 726 ntAPPRIS P1 TSL 1 (best) BASIC5.37□□□□□ -1.55
TRIM47Q96LD4 U3.53-201ENST00000628922 216 ntBASIC5.37□□□□□ -1.55
TRIM47Q96LD4 MIR3658-201ENST00000636291 56 ntBASIC5.37□□□□□ -1.55
TRIM47Q96LD4 OR56A1-202ENST00000641423 6096 ntAPPRIS P1 BASIC5.37□□□□□ -1.55
TRIM47Q96LD4 PRKACB-208ENST00000394839 4200 ntTSL 2 BASIC5.37□□□□□ -1.55
TRIM47Q96LD4 MYO9A-209ENST00000564571 8111 ntAPPRIS ALT2 TSL 1 (best) BASIC5.37□□□□□ -1.55
TRIM47Q96LD4 CARF-208ENST00000428585 2513 ntTSL 2 BASIC5.37□□□□□ -1.55
TRIM47Q96LD4 GALNT13-202ENST00000409237 2591 ntTSL 1 (best) BASIC5.37□□□□□ -1.55
TRIM47Q96LD4 TRGC1-201ENST00000443402 2730 ntAPPRIS P1 BASIC5.37□□□□□ -1.55
TRIM47Q96LD4 EIF4E3-202ENST00000389826 6083 ntTSL 5 BASIC5.36□□□□□ -1.55
TRIM47Q96LD4 PLCE1-202ENST00000371380 12024 ntAPPRIS P3 TSL 1 (best) BASIC5.36□□□□□ -1.55
TRIM47Q96LD4 AC005332.5-201ENST00000591222 2919 ntBASIC5.36□□□□□ -1.55
TRIM47Q96LD4 ANKRD34C-201ENST00000421388 4951 ntAPPRIS P1 BASIC5.36□□□□□ -1.55
TRIM47Q96LD4 OR2H1-203ENST00000377136 3024 ntAPPRIS P1 BASIC5.36□□□□□ -1.55
TRIM47Q96LD4 OR8H2-203ENST00000641311 3092 ntAPPRIS P2 BASIC5.36□□□□□ -1.55
TRIM47Q96LD4 AC104260.2-201ENST00000623551 3497 ntBASIC5.36□□□□□ -1.55
TRIM47Q96LD4 HACD4-202ENST00000495827 8267 ntAPPRIS P1 TSL 2 BASIC5.36□□□□□ -1.55
TRIM47Q96LD4 AC007685.1-201ENST00000329806 452 ntBASIC5.36□□□□□ -1.55
TRIM47Q96LD4 RNU6-288P-201ENST00000363690 104 ntBASIC5.36□□□□□ -1.55
TRIM47Q96LD4 UBBP2-201ENST00000376781 231 ntBASIC5.36□□□□□ -1.55
TRIM47Q96LD4 RNU6-211P-201ENST00000384047 107 ntBASIC5.36□□□□□ -1.55
TRIM47Q96LD4 RNU6-225P-201ENST00000384613 103 ntBASIC5.36□□□□□ -1.55
TRIM47Q96LD4 MIR659-201ENST00000384963 97 ntBASIC5.36□□□□□ -1.55
TRIM47Q96LD4 AL592291.1-201ENST00000403830 352 ntBASIC5.36□□□□□ -1.55
TRIM47Q96LD4 RNY4P30-201ENST00000410216 95 ntBASIC5.36□□□□□ -1.55
TRIM47Q96LD4 MAGEA8-AS1-201ENST00000427671 476 ntTSL 3 BASIC5.36□□□□□ -1.55
TRIM47Q96LD4 RN7SL810P-201ENST00000493031 276 ntBASIC5.36□□□□□ -1.55
TRIM47Q96LD4 AC008641.1-201ENST00000523781 248 ntTSL 3 BASIC5.36□□□□□ -1.55
TRIM47Q96LD4 ATP5F1P5-201ENST00000526403 760 ntBASIC5.36□□□□□ -1.55
TRIM47Q96LD4 DEFB130C-201ENST00000528518 237 ntTSL 1 (best) BASIC5.36□□□□□ -1.55
TRIM47Q96LD4 DNAJC19P2-201ENST00000593340 302 ntBASIC5.36□□□□□ -1.55
TRIM47Q96LD4 MIR15A-201ENST00000607334 83 ntBASIC5.36□□□□□ -1.55
TRIM47Q96LD4 AL589740.1-204ENST00000634677 630 ntTSL 4 BASIC5.36□□□□□ -1.55
TRIM47Q96LD4 NAIP-210ENST00000523981 4543 ntTSL 1 (best) BASIC5.36□□□□□ -1.55
TRIM47Q96LD4 AC139769.1-204ENST00000472297 1931 ntBASIC5.36□□□□□ -1.55
TRIM47Q96LD4 LINC01689-201ENST00000416218 2007 ntTSL 1 (best) BASIC5.36□□□□□ -1.55
TRIM47Q96LD4 AP001642.1-201ENST00000624727 2117 ntBASIC5.36□□□□□ -1.55
TRIM47Q96LD4 AC126323.6-202ENST00000568092 3511 ntBASIC5.36□□□□□ -1.55
TRIM47Q96LD4 AC006148.1-201ENST00000484322 4310 ntTSL 1 (best) BASIC5.35□□□□□ -1.55
TRIM47Q96LD4 TLR8-201ENST00000218032 4216 ntAPPRIS ALT2 TSL 1 (best) BASIC5.35□□□□□ -1.55
TRIM47Q96LD4 FOXP2-220ENST00000634411 4065 ntTSL 5 BASIC5.35□□□□□ -1.55
TRIM47Q96LD4 LIX1-201ENST00000274382 4026 ntAPPRIS P1 TSL 1 (best) BASIC5.35□□□□□ -1.55
TRIM47Q96LD4 AC064875.1-201ENST00000425974 1942 ntTSL 2 BASIC5.35□□□□□ -1.55
TRIM47Q96LD4 ST7-212ENST00000422922 1887 ntTSL 5 BASIC5.35□□□□□ -1.55
TRIM47Q96LD4 GPR34-201ENST00000378138 1815 ntAPPRIS P1 TSL 1 (best) BASIC5.35□□□□□ -1.55
TRIM47Q96LD4 AC021146.4-201ENST00000309229 279 ntBASIC5.35□□□□□ -1.55
TRIM47Q96LD4 RNU6-899P-201ENST00000363947 107 ntBASIC5.35□□□□□ -1.55
TRIM47Q96LD4 SNORA40.19-201ENST00000390846 128 ntBASIC5.35□□□□□ -1.55
TRIM47Q96LD4 RNA5SP317-201ENST00000410176 116 ntBASIC5.35□□□□□ -1.55
TRIM47Q96LD4 RNA5SP311-201ENST00000411290 116 ntBASIC5.35□□□□□ -1.55
Retrieved 100 of 98,524 protein–RNA pairs in 122 ms