Protein–RNA interactions for Protein: Q95604

HLA-C, HLA class I histocompatibility antigen, Cw-17 alpha chain, humanhuman

Predictions only

Length 372 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-CQ95604 CLDN12-203ENST00000394605 3488 ntAPPRIS P1 TSL 2 BASIC5.22□□□□□ -1.57
HLA-CQ95604 RNU6-873P-201ENST00000363833 107 ntBASIC5.22□□□□□ -1.57
HLA-CQ95604 RN7SKP153-201ENST00000365026 316 ntBASIC5.22□□□□□ -1.57
HLA-CQ95604 DPRX-201ENST00000376650 648 ntAPPRIS P1 TSL 3 BASIC5.22□□□□□ -1.57
HLA-CQ95604 RNU6-245P-201ENST00000384020 107 ntBASIC5.22□□□□□ -1.57
HLA-CQ95604 AL513008.1-201ENST00000412701 161 ntTSL 5 BASIC5.22□□□□□ -1.57
HLA-CQ95604 RPS20P10-201ENST00000451209 253 ntBASIC5.22□□□□□ -1.57
HLA-CQ95604 snoU13.22-201ENST00000459428 104 ntBASIC5.22□□□□□ -1.57
HLA-CQ95604 AC011276.1-201ENST00000469688 323 ntBASIC5.22□□□□□ -1.57
HLA-CQ95604 AC008869.1-201ENST00000510938 442 ntTSL 2 BASIC5.22□□□□□ -1.57
HLA-CQ95604 RNU6-1333P-201ENST00000516162 93 ntBASIC5.22□□□□□ -1.57
HLA-CQ95604 MIR2116-201ENST00000517221 80 ntBASIC5.22□□□□□ -1.57
HLA-CQ95604 AC100767.1-201ENST00000528178 123 ntBASIC5.22□□□□□ -1.57
HLA-CQ95604 HSPE1P4-201ENST00000550617 308 ntBASIC5.22□□□□□ -1.57
HLA-CQ95604 AL356575.1-201ENST00000603008 283 ntBASIC5.22□□□□□ -1.57
HLA-CQ95604 LINC01232-203ENST00000625369 576 ntTSL 4 BASIC5.22□□□□□ -1.57
HLA-CQ95604 IKZF2-201ENST00000342002 3747 ntAPPRIS ALT2 TSL 1 (best) BASIC5.22□□□□□ -1.57
HLA-CQ95604 DCLRE1A-201ENST00000361384 4468 ntAPPRIS P1 TSL 1 (best) BASIC5.22□□□□□ -1.57
HLA-CQ95604 DTWD2-201ENST00000304058 4365 ntTSL 1 (best) BASIC5.22□□□□□ -1.57
HLA-CQ95604 FAM216B-201ENST00000313851 3243 ntAPPRIS P1 TSL 1 (best) BASIC5.22□□□□□ -1.57
HLA-CQ95604 TECRL-201ENST00000381210 3573 ntAPPRIS P1 TSL 1 (best) BASIC5.22□□□□□ -1.57
HLA-CQ95604 A1CF-207ENST00000395495 9400 ntTSL 5 BASIC5.22□□□□□ -1.57
HLA-CQ95604 AASDH-210ENST00000602986 3480 ntTSL 5 BASIC5.22□□□□□ -1.57
HLA-CQ95604 ACSM3-201ENST00000289416 2845 ntAPPRIS P1 TSL 1 (best) BASIC5.22□□□□□ -1.57
HLA-CQ95604 LRP1B-201ENST00000389484 16535 ntAPPRIS P1 TSL 1 (best) BASIC5.22□□□□□ -1.57
HLA-CQ95604 PTK2-213ENST00000519465 3279 ntTSL 1 (best) BASIC5.22□□□□□ -1.57
HLA-CQ95604 SRP72P2-201ENST00000344851 1979 ntBASIC5.22□□□□□ -1.57
HLA-CQ95604 RAD17-220ENST00000616683 3057 ntTSL 1 (best) BASIC5.22□□□□□ -1.57
HLA-CQ95604 PTPRB-202ENST00000334414 12316 ntAPPRIS P4 TSL 1 (best) BASIC5.22□□□□□ -1.57
HLA-CQ95604 AL391684.1-201ENST00000416191 2998 ntTSL 5 BASIC5.22□□□□□ -1.57
HLA-CQ95604 EMSY-204ENST00000524490 4015 ntTSL 2 BASIC5.21□□□□□ -1.57
HLA-CQ95604 ADGRG4-202ENST00000394141 8971 ntAPPRIS ALT2 TSL 1 (best) BASIC5.21□□□□□ -1.57
HLA-CQ95604 NPSR1-AS1-202ENST00000419766 4821 ntTSL 1 (best) BASIC5.21□□□□□ -1.57
HLA-CQ95604 VWC2L-201ENST00000312504 4610 ntAPPRIS P1 TSL 1 (best) BASIC5.21□□□□□ -1.57
HLA-CQ95604 SEC31A-209ENST00000500777 3610 ntTSL 5 BASIC5.21□□□□□ -1.57
HLA-CQ95604 ZNF33A-202ENST00000374618 6122 ntTSL 4 BASIC5.21□□□□□ -1.58
HLA-CQ95604 N4BP2L2-204ENST00000399396 2872 ntTSL 5 BASIC5.21□□□□□ -1.58
HLA-CQ95604 MTND5P35-201ENST00000557537 1720 ntBASIC5.21□□□□□ -1.58
HLA-CQ95604 ZBTB25-201ENST00000394715 2094 ntAPPRIS P1 TSL 2 BASIC5.21□□□□□ -1.58
HLA-CQ95604 P2RY13-201ENST00000325602 2764 ntAPPRIS P1 TSL 1 (best) BASIC5.21□□□□□ -1.58
HLA-CQ95604 RNA5SP28-201ENST00000363841 119 ntBASIC5.21□□□□□ -1.58
HLA-CQ95604 RNU6-899P-201ENST00000363947 107 ntBASIC5.21□□□□□ -1.58
HLA-CQ95604 RNA5SP509-201ENST00000364577 119 ntBASIC5.21□□□□□ -1.58
HLA-CQ95604 MIR513C-201ENST00000401352 84 ntBASIC5.21□□□□□ -1.58
HLA-CQ95604 AL357075.1-201ENST00000404107 726 ntBASIC5.21□□□□□ -1.58
HLA-CQ95604 SNORA11F-201ENST00000408237 128 ntBASIC5.21□□□□□ -1.58
HLA-CQ95604 RNU2-54P-201ENST00000410299 190 ntBASIC5.21□□□□□ -1.58
HLA-CQ95604 AC074117.2-201ENST00000417130 397 ntBASIC5.21□□□□□ -1.58
HLA-CQ95604 RAB28P5-201ENST00000427490 651 ntBASIC5.21□□□□□ -1.58
HLA-CQ95604 BX323845.1-201ENST00000432417 179 ntBASIC5.21□□□□□ -1.58
HLA-CQ95604 RPL23AP58-201ENST00000440453 469 ntBASIC5.21□□□□□ -1.58
HLA-CQ95604 AC073465.2-201ENST00000440938 498 ntBASIC5.21□□□□□ -1.58
HLA-CQ95604 LINC02210-201ENST00000444561 288 ntBASIC5.21□□□□□ -1.58
HLA-CQ95604 AC105389.2-201ENST00000506475 435 ntTSL 3 BASIC5.21□□□□□ -1.58
HLA-CQ95604 AC091912.1-201ENST00000511351 248 ntBASIC5.21□□□□□ -1.58
HLA-CQ95604 AC107027.2-201ENST00000512197 115 ntBASIC5.21□□□□□ -1.58
HLA-CQ95604 Y_RNA.797-201ENST00000515977 94 ntBASIC5.21□□□□□ -1.58
HLA-CQ95604 SNORA31.8-201ENST00000516327 108 ntBASIC5.21□□□□□ -1.58
HLA-CQ95604 ZYXP1-201ENST00000617638 118 ntBASIC5.21□□□□□ -1.58
HLA-CQ95604 CCL14-203ENST00000620991 426 ntTSL 1 (best) BASIC5.21□□□□□ -1.58
HLA-CQ95604 U2.21-201ENST00000637295 81 ntBASIC5.21□□□□□ -1.58
HLA-CQ95604 ANK3-201ENST00000280772 16874 ntAPPRIS P3 TSL 1 (best) BASIC5.21□□□□□ -1.58
HLA-CQ95604 SPINK5-201ENST00000256084 3535 ntAPPRIS P3 TSL 1 (best) BASIC5.21□□□□□ -1.58
HLA-CQ95604 AC099654.7-201ENST00000635788 2127 ntBASIC5.21□□□□□ -1.58
HLA-CQ95604 CSDE1-202ENST00000339438 4006 ntTSL 1 (best) BASIC5.21□□□□□ -1.58
HLA-CQ95604 OR10G4-203ENST00000641722 3301 ntAPPRIS P1 BASIC5.21□□□□□ -1.58
HLA-CQ95604 STON1-201ENST00000404752 5511 ntAPPRIS P1 TSL 1 (best) BASIC5.2□□□□□ -1.58
HLA-CQ95604 NR2C2-213ENST00000617312 8113 ntTSL 1 (best) BASIC5.2□□□□□ -1.58
HLA-CQ95604 AMY1B-201ENST00000330330 1862 ntAPPRIS P1 TSL 1 (best) BASIC5.2□□□□□ -1.58
HLA-CQ95604 AMY2A-201ENST00000414303 1634 ntAPPRIS P1 TSL 1 (best) BASIC5.2□□□□□ -1.58
HLA-CQ95604 AC126323.6-202ENST00000568092 3511 ntBASIC5.2□□□□□ -1.58
HLA-CQ95604 PRG4-206ENST00000635041 4915 ntAPPRIS ALT2 TSL 5 BASIC5.2□□□□□ -1.58
HLA-CQ95604 LINC01902-203ENST00000637369 7356 ntTSL 5 BASIC5.2□□□□□ -1.58
HLA-CQ95604 DEUP1-201ENST00000298050 2664 ntAPPRIS P1 TSL 5 BASIC5.2□□□□□ -1.58
HLA-CQ95604 GAGE12B-201ENST00000361446 117 ntAPPRIS P1 BASIC5.2□□□□□ -1.58
HLA-CQ95604 Y_RNA.179-201ENST00000363844 90 ntBASIC5.2□□□□□ -1.58
HLA-CQ95604 Y_RNA.261-201ENST00000364631 102 ntBASIC5.2□□□□□ -1.58
HLA-CQ95604 Y_RNA.498-201ENST00000384460 102 ntBASIC5.2□□□□□ -1.58
HLA-CQ95604 SNORA70C-201ENST00000384538 135 ntBASIC5.2□□□□□ -1.58
HLA-CQ95604 RNU6-140P-201ENST00000384566 108 ntBASIC5.2□□□□□ -1.58
HLA-CQ95604 SNORA26.3-201ENST00000391119 136 ntBASIC5.2□□□□□ -1.58
HLA-CQ95604 AL160275.2-201ENST00000412010 394 ntBASIC5.2□□□□□ -1.58
HLA-CQ95604 LINC01341-201ENST00000419361 552 ntTSL 2 BASIC5.2□□□□□ -1.58
HLA-CQ95604 AC010154.1-201ENST00000425857 269 ntBASIC5.2□□□□□ -1.58
HLA-CQ95604 MTND4LP9-201ENST00000427694 174 ntBASIC5.2□□□□□ -1.58
HLA-CQ95604 RPL37P4-201ENST00000448908 268 ntBASIC5.2□□□□□ -1.58
HLA-CQ95604 AL162591.2-201ENST00000449634 317 ntBASIC5.2□□□□□ -1.58
HLA-CQ95604 AL451050.1-201ENST00000450126 415 ntBASIC5.2□□□□□ -1.58
HLA-CQ95604 snoU13.4-201ENST00000458916 104 ntBASIC5.2□□□□□ -1.58
HLA-CQ95604 AC091167.1-201ENST00000492017 396 ntBASIC5.2□□□□□ -1.58
HLA-CQ95604 AC023424.1-201ENST00000496058 459 ntBASIC5.2□□□□□ -1.58
HLA-CQ95604 AC107918.3-201ENST00000533272 382 ntBASIC5.2□□□□□ -1.58
HLA-CQ95604 TMEM106C-220ENST00000552561 810 ntAPPRIS P1 TSL 1 (best) BASIC5.2□□□□□ -1.58
HLA-CQ95604 CR936218.1-201ENST00000570454 304 ntTSL 2 BASIC5.2□□□□□ -1.58
HLA-CQ95604 AP005062.1-201ENST00000581502 607 ntTSL 3 BASIC5.2□□□□□ -1.58
HLA-CQ95604 DNAJC19P2-201ENST00000593340 302 ntBASIC5.2□□□□□ -1.58
HLA-CQ95604 AP005432.2-201ENST00000608162 586 ntBASIC5.2□□□□□ -1.58
HLA-CQ95604 MIR6134-201ENST00000617606 109 ntBASIC5.2□□□□□ -1.58
HLA-CQ95604 ZEB2_AS1_1.1-201ENST00000621504 128 ntBASIC5.2□□□□□ -1.58
HLA-CQ95604 CR381572.2-201ENST00000624852 397 ntBASIC5.2□□□□□ -1.58
Retrieved 100 of 98,524 protein–RNA pairs in 101.5 ms