Protein–RNA interactions for Protein: Q8WV44

TRIM41, E3 ubiquitin-protein ligase TRIM41, humanhuman

Predictions only

Length 630 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM41Q8WV44 REREP1Y-201ENST00000422655 198 ntBASIC7.43□□□□□ -1.22
TRIM41Q8WV44 HMGN2P31-201ENST00000432430 273 ntBASIC7.43□□□□□ -1.22
TRIM41Q8WV44 BX679664.1-201ENST00000434429 253 ntBASIC7.43□□□□□ -1.22
TRIM41Q8WV44 REREP2Y-201ENST00000439103 200 ntBASIC7.43□□□□□ -1.22
TRIM41Q8WV44 BX510359.1-201ENST00000456973 237 ntBASIC7.43□□□□□ -1.22
TRIM41Q8WV44 AC005699.1-205ENST00000510639 427 ntTSL 2 BASIC7.43□□□□□ -1.22
TRIM41Q8WV44 RNU6-143P-201ENST00000516942 93 ntBASIC7.43□□□□□ -1.22
TRIM41Q8WV44 MTND5P41-201ENST00000517498 206 ntBASIC7.43□□□□□ -1.22
TRIM41Q8WV44 AC011476.5-201ENST00000615594 130 ntBASIC7.43□□□□□ -1.22
TRIM41Q8WV44 LINC01232-201ENST00000625254 836 ntTSL 5 BASIC7.43□□□□□ -1.22
TRIM41Q8WV44 MIR4275-201ENST00000636486 87 ntBASIC7.43□□□□□ -1.22
TRIM41Q8WV44 GYPB-216ENST00000638448 363 ntAPPRIS P1 TSL 1 (best) BASIC7.43□□□□□ -1.22
TRIM41Q8WV44 SEMG1-201ENST00000372781 1662 ntAPPRIS P1 TSL 1 (best) BASIC7.43□□□□□ -1.22
TRIM41Q8WV44 C21orf91-201ENST00000284881 5433 ntAPPRIS P4 TSL 2 BASIC7.43□□□□□ -1.22
TRIM41Q8WV44 NCAPGP1-201ENST00000505112 1814 ntBASIC7.43□□□□□ -1.22
TRIM41Q8WV44 ZMYND11-217ENST00000627286 3914 ntTSL 5 BASIC7.43□□□□□ -1.22
TRIM41Q8WV44 CPNE8-202ENST00000360449 1757 ntAPPRIS ALT2 TSL 2 BASIC7.42□□□□□ -1.22
TRIM41Q8WV44 CFAP47-203ENST00000378653 9943 ntAPPRIS P2 TSL 5 BASIC7.42□□□□□ -1.22
TRIM41Q8WV44 Y_RNA.81-201ENST00000362997 102 ntBASIC7.42□□□□□ -1.22
TRIM41Q8WV44 RNU6-1155P-201ENST00000363554 107 ntBASIC7.42□□□□□ -1.22
TRIM41Q8WV44 MIR1271-201ENST00000408537 86 ntBASIC7.42□□□□□ -1.22
TRIM41Q8WV44 RNA5SP56-201ENST00000410277 118 ntBASIC7.42□□□□□ -1.22
TRIM41Q8WV44 RPS20P14-201ENST00000412545 360 ntBASIC7.42□□□□□ -1.22
TRIM41Q8WV44 AC012370.1-201ENST00000419244 530 ntTSL 3 BASIC7.42□□□□□ -1.22
TRIM41Q8WV44 AC011897.1-201ENST00000450715 346 ntTSL 3 BASIC7.42□□□□□ -1.22
TRIM41Q8WV44 AL139260.1-202ENST00000456813 441 ntTSL 3 BASIC7.42□□□□□ -1.22
TRIM41Q8WV44 RN7SKP210-201ENST00000459176 261 ntBASIC7.42□□□□□ -1.22
TRIM41Q8WV44 AC022493.1-201ENST00000492984 337 ntBASIC7.42□□□□□ -1.22
TRIM41Q8WV44 RNU6-1095P-201ENST00000516148 108 ntBASIC7.42□□□□□ -1.22
TRIM41Q8WV44 AL606490.9-201ENST00000603331 271 ntBASIC7.42□□□□□ -1.22
TRIM41Q8WV44 AL160290.3-201ENST00000604869 165 ntBASIC7.42□□□□□ -1.22
TRIM41Q8WV44 BRDTP1-201ENST00000605735 677 ntBASIC7.42□□□□□ -1.22
TRIM41Q8WV44 AC240442.1-201ENST00000616055 283 ntBASIC7.42□□□□□ -1.22
TRIM41Q8WV44 UBE2E2-207ENST00000628311 267 ntTSL 5 BASIC7.42□□□□□ -1.22
TRIM41Q8WV44 ZBED6-202ENST00000550078 12481 ntAPPRIS P1 TSL 1 (best) BASIC7.42□□□□□ -1.22
TRIM41Q8WV44 CNTN1-202ENST00000348761 3328 ntTSL 1 (best) BASIC7.42□□□□□ -1.22
TRIM41Q8WV44 OR56A3-205ENST00000641905 4595 ntAPPRIS P1 BASIC7.42□□□□□ -1.22
TRIM41Q8WV44 AC104260.2-201ENST00000623551 3497 ntBASIC7.42□□□□□ -1.22
TRIM41Q8WV44 PRG4-204ENST00000445192 5044 ntAPPRIS P3 TSL 5 BASIC7.41□□□□□ -1.22
TRIM41Q8WV44 OBSCN-205ENST00000422127 24060 ntTSL 5 BASIC7.41□□□□□ -1.22
TRIM41Q8WV44 LINC02431-201ENST00000503929 3601 ntTSL 1 (best) BASIC7.41□□□□□ -1.22
TRIM41Q8WV44 RC3H1-202ENST00000367694 3775 ntAPPRIS ALT1 TSL 2 BASIC7.41□□□□□ -1.22
TRIM41Q8WV44 SNORD50.1-201ENST00000362987 71 ntBASIC7.41□□□□□ -1.22
TRIM41Q8WV44 RNY3P4-201ENST00000384428 101 ntBASIC7.41□□□□□ -1.22
TRIM41Q8WV44 MTCYBP2-201ENST00000407745 171 ntBASIC7.41□□□□□ -1.22
TRIM41Q8WV44 RPL7AP73-201ENST00000413490 353 ntBASIC7.41□□□□□ -1.22
TRIM41Q8WV44 AL096701.2-201ENST00000416920 238 ntBASIC7.41□□□□□ -1.22
TRIM41Q8WV44 RPL26P6-201ENST00000440913 438 ntBASIC7.41□□□□□ -1.22
TRIM41Q8WV44 RNU6-496P-201ENST00000516145 99 ntBASIC7.41□□□□□ -1.22
TRIM41Q8WV44 Y_RNA.706-201ENST00000516933 99 ntBASIC7.41□□□□□ -1.22
TRIM41Q8WV44 IGKV2-38-201ENST00000517443 247 ntBASIC7.41□□□□□ -1.22
TRIM41Q8WV44 AC103996.1-201ENST00000555468 102 ntBASIC7.41□□□□□ -1.22
TRIM41Q8WV44 HS1BP3-208ENST00000631166 78 ntTSL 5 BASIC7.41□□□□□ -1.22
TRIM41Q8WV44 GPR34-201ENST00000378138 1815 ntAPPRIS P1 TSL 1 (best) BASIC7.41□□□□□ -1.22
TRIM41Q8WV44 TRGC1-201ENST00000443402 2730 ntAPPRIS P1 BASIC7.4□□□□□ -1.22
TRIM41Q8WV44 UBE2L2-201ENST00000254302 429 ntBASIC7.4□□□□□ -1.22
TRIM41Q8WV44 SNORA12.2-201ENST00000391040 156 ntBASIC7.4□□□□□ -1.22
TRIM41Q8WV44 AC008065.1-201ENST00000428525 348 ntBASIC7.4□□□□□ -1.22
TRIM41Q8WV44 LINC01005-202ENST00000451440 531 ntTSL 4 BASIC7.4□□□□□ -1.22
TRIM41Q8WV44 AL591473.1-201ENST00000464297 313 ntBASIC7.4□□□□□ -1.22
TRIM41Q8WV44 ATP6V1G1P6-201ENST00000504007 334 ntBASIC7.4□□□□□ -1.22
TRIM41Q8WV44 SNORD116-28-201ENST00000516123 91 ntBASIC7.4□□□□□ -1.22
TRIM41Q8WV44 AC109479.2-201ENST00000517842 174 ntBASIC7.4□□□□□ -1.22
TRIM41Q8WV44 AC084816.1-207ENST00000538317 584 ntTSL 4 BASIC7.4□□□□□ -1.22
TRIM41Q8WV44 LINC02386-202ENST00000551287 564 ntTSL 4 BASIC7.4□□□□□ -1.22
TRIM41Q8WV44 TRAV37-201ENST00000553906 342 ntBASIC7.4□□□□□ -1.22
TRIM41Q8WV44 C2orf91-203ENST00000615044 393 ntAPPRIS ALT2 TSL 5 BASIC7.4□□□□□ -1.22
TRIM41Q8WV44 RMST_4.1-201ENST00000616886 107 ntBASIC7.4□□□□□ -1.22
TRIM41Q8WV44 MIR4496-201ENST00000635896 61 ntBASIC7.4□□□□□ -1.22
TRIM41Q8WV44 GPATCH2L-214ENST00000621494 12396 ntAPPRIS P1 TSL 2 BASIC7.4□□□□□ -1.22
TRIM41Q8WV44 ZNF645-201ENST00000323684 1519 ntAPPRIS P1 BASIC7.4□□□□□ -1.22
TRIM41Q8WV44 AC007785.2-201ENST00000598627 1916 ntBASIC7.4□□□□□ -1.23
TRIM41Q8WV44 ZFPM2-203ENST00000517361 3300 ntTSL 2 BASIC7.4□□□□□ -1.23
TRIM41Q8WV44 PEX5L-202ENST00000392649 8540 ntAPPRIS ALT2 TSL 5 BASIC7.39□□□□□ -1.23
TRIM41Q8WV44 ATG12-208ENST00000509910 4333 ntAPPRIS P1 TSL 1 (best) BASIC7.39□□□□□ -1.23
TRIM41Q8WV44 DPP10-204ENST00000409163 3883 ntAPPRIS ALT2 TSL 2 BASIC7.39□□□□□ -1.23
TRIM41Q8WV44 STON1-GTF2A1L-204ENST00000405008 3821 ntAPPRIS P1 TSL 5 BASIC7.39□□□□□ -1.23
TRIM41Q8WV44 FAM111B-202ENST00000411426 3344 ntTSL 4 BASIC7.39□□□□□ -1.23
TRIM41Q8WV44 NRIP1-201ENST00000318948 7556 ntAPPRIS P1 TSL 2 BASIC7.39□□□□□ -1.23
TRIM41Q8WV44 ARHGAP42-203ENST00000524892 5685 ntTSL 5 BASIC7.39□□□□□ -1.23
TRIM41Q8WV44 RNU6-1117P-201ENST00000384525 104 ntBASIC7.39□□□□□ -1.23
TRIM41Q8WV44 SNORA53-201ENST00000391141 249 ntBASIC7.39□□□□□ -1.23
TRIM41Q8WV44 RN7SKP167-201ENST00000411047 285 ntBASIC7.39□□□□□ -1.23
TRIM41Q8WV44 RPL21P104-201ENST00000464143 478 ntBASIC7.39□□□□□ -1.23
TRIM41Q8WV44 RPS26P28-201ENST00000470806 348 ntBASIC7.39□□□□□ -1.23
TRIM41Q8WV44 AP002833.1-201ENST00000530572 566 ntTSL 3 BASIC7.39□□□□□ -1.23
TRIM41Q8WV44 AC025272.1-201ENST00000569661 483 ntTSL 2 BASIC7.39□□□□□ -1.23
TRIM41Q8WV44 AC120057.2-201ENST00000571520 271 ntBASIC7.39□□□□□ -1.23
TRIM41Q8WV44 AL365265.1-201ENST00000621045 234 ntBASIC7.39□□□□□ -1.23
TRIM41Q8WV44 RAP1B-201ENST00000250559 13438 ntAPPRIS P1 TSL 1 (best) BASIC7.39□□□□□ -1.23
TRIM41Q8WV44 ATRX-202ENST00000395603 10218 ntAPPRIS ALT2 TSL 1 (best) BASIC7.39□□□□□ -1.23
TRIM41Q8WV44 CUL2-201ENST00000374746 3903 ntTSL 5 BASIC7.39□□□□□ -1.23
TRIM41Q8WV44 RLIM-201ENST00000332687 8317 ntAPPRIS P1 TSL 1 (best) BASIC7.39□□□□□ -1.23
TRIM41Q8WV44 CENPE-202ENST00000380026 8241 ntTSL 1 (best) BASIC7.38□□□□□ -1.23
TRIM41Q8WV44 GYPA-202ENST00000360771 2659 ntAPPRIS P3 TSL 1 (best) BASIC7.38□□□□□ -1.23
TRIM41Q8WV44 AL499616.1-201ENST00000415437 2633 ntTSL 2 BASIC7.38□□□□□ -1.23
TRIM41Q8WV44 MUC7-201ENST00000304887 2443 ntAPPRIS P2 TSL 1 (best) BASIC7.38□□□□□ -1.23
TRIM41Q8WV44 ZNF804A-202ENST00000613975 3986 ntTSL 5 BASIC7.38□□□□□ -1.23
TRIM41Q8WV44 RNU4-90P-201ENST00000362773 141 ntBASIC7.38□□□□□ -1.23
TRIM41Q8WV44 RPS20P1-201ENST00000434853 354 ntBASIC7.38□□□□□ -1.23
Retrieved 100 of 98,524 protein–RNA pairs in 124.9 ms