Protein–RNA interactions for Protein: Q8TAU0

NKX2-3, Homeobox protein Nkx-2.3, humanhuman

Predictions only

Length 364 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NKX2-3Q8TAU0 KLHL13-201ENST00000262820 3972 ntAPPRIS P3 TSL 1 (best) BASIC5.61□□□□□ -1.51
NKX2-3Q8TAU0 SNORD113.2-201ENST00000364166 89 ntBASIC5.61□□□□□ -1.51
NKX2-3Q8TAU0 AL359837.1-201ENST00000381357 287 ntBASIC5.61□□□□□ -1.51
NKX2-3Q8TAU0 MIR134-201ENST00000385258 73 ntBASIC5.61□□□□□ -1.51
NKX2-3Q8TAU0 TRAJ6-201ENST00000390531 62 ntAPPRIS P1 BASIC5.61□□□□□ -1.51
NKX2-3Q8TAU0 RN7SKP284-201ENST00000411002 343 ntBASIC5.61□□□□□ -1.51
NKX2-3Q8TAU0 CKS1BP6-201ENST00000424932 240 ntBASIC5.61□□□□□ -1.51
NKX2-3Q8TAU0 STK31-205ENST00000433467 3085 ntTSL 2 BASIC5.61□□□□□ -1.51
NKX2-3Q8TAU0 AL050349.1-201ENST00000441029 401 ntTSL 2 BASIC5.61□□□□□ -1.51
NKX2-3Q8TAU0 TDGF1P1-201ENST00000445734 527 ntBASIC5.61□□□□□ -1.51
NKX2-3Q8TAU0 AL162591.2-201ENST00000449634 317 ntBASIC5.61□□□□□ -1.51
NKX2-3Q8TAU0 RPS20P10-201ENST00000451209 253 ntBASIC5.61□□□□□ -1.51
NKX2-3Q8TAU0 AC005042.3-201ENST00000453230 174 ntBASIC5.61□□□□□ -1.51
NKX2-3Q8TAU0 SULF1-204ENST00000458141 5551 ntAPPRIS P1 TSL 1 (best) BASIC5.61□□□□□ -1.51
NKX2-3Q8TAU0 RPL23AP75-201ENST00000491601 451 ntBASIC5.61□□□□□ -1.51
NKX2-3Q8TAU0 DDX4-204ENST00000505374 2884 ntAPPRIS P1 TSL 1 (best) BASIC5.61□□□□□ -1.51
NKX2-3Q8TAU0 AC010457.1-201ENST00000510469 458 ntTSL 3 BASIC5.61□□□□□ -1.51
NKX2-3Q8TAU0 RN7SKP277-201ENST00000516895 283 ntBASIC5.61□□□□□ -1.51
NKX2-3Q8TAU0 UTS2-201ENST00000054668 420 ntAPPRIS P4 TSL 1 (best) BASIC5.61□□□□□ -1.51
NKX2-3Q8TAU0 SNORA74C-1-201ENST00000580726 201 ntBASIC5.61□□□□□ -1.51
NKX2-3Q8TAU0 AC022441.3-201ENST00000605737 136 ntBASIC5.61□□□□□ -1.51
NKX2-3Q8TAU0 PLCB1-210ENST00000612075 6576 ntTSL 5 BASIC5.61□□□□□ -1.51
NKX2-3Q8TAU0 MIR3658-201ENST00000636291 56 ntBASIC5.61□□□□□ -1.51
NKX2-3Q8TAU0 ZBTB38-201ENST00000321464 3588 ntAPPRIS P1 BASIC5.61□□□□□ -1.51
NKX2-3Q8TAU0 P2RY13-201ENST00000325602 2764 ntAPPRIS P1 TSL 1 (best) BASIC5.61□□□□□ -1.51
NKX2-3Q8TAU0 PRG4-206ENST00000635041 4915 ntAPPRIS ALT2 TSL 5 BASIC5.6□□□□□ -1.51
NKX2-3Q8TAU0 TUSC7-203ENST00000477539 2415 ntTSL 1 (best) BASIC5.6□□□□□ -1.51
NKX2-3Q8TAU0 PTPRB-202ENST00000334414 12316 ntAPPRIS P4 TSL 1 (best) BASIC5.6□□□□□ -1.51
NKX2-3Q8TAU0 CUL2-201ENST00000374746 3903 ntTSL 5 BASIC5.6□□□□□ -1.51
NKX2-3Q8TAU0 SCAF11-212ENST00000549162 3934 ntTSL 1 (best) BASIC5.6□□□□□ -1.51
NKX2-3Q8TAU0 LINC02431-201ENST00000503929 3601 ntTSL 1 (best) BASIC5.6□□□□□ -1.51
NKX2-3Q8TAU0 SMAD4-202ENST00000398417 8495 ntAPPRIS P1 TSL 5 BASIC5.6□□□□□ -1.51
NKX2-3Q8TAU0 ASB5-201ENST00000296525 3031 ntAPPRIS P1 TSL 1 (best) BASIC5.6□□□□□ -1.51
NKX2-3Q8TAU0 PTPRD-213ENST00000537002 8224 ntTSL 1 (best) BASIC5.6□□□□□ -1.51
NKX2-3Q8TAU0 OR9G4-203ENST00000641581 2603 ntAPPRIS P1 BASIC5.6□□□□□ -1.51
NKX2-3Q8TAU0 OR9G4-204ENST00000641668 2608 ntAPPRIS P1 BASIC5.6□□□□□ -1.51
NKX2-3Q8TAU0 RNU6-961P-201ENST00000363893 105 ntBASIC5.6□□□□□ -1.51
NKX2-3Q8TAU0 Y_RNA.337-201ENST00000365312 102 ntBASIC5.6□□□□□ -1.51
NKX2-3Q8TAU0 SNORA37-201ENST00000384504 129 ntBASIC5.6□□□□□ -1.51
NKX2-3Q8TAU0 MIR659-201ENST00000384963 97 ntBASIC5.6□□□□□ -1.51
NKX2-3Q8TAU0 RNU6-821P-201ENST00000390995 107 ntBASIC5.6□□□□□ -1.51
NKX2-3Q8TAU0 AL590762.2-201ENST00000395798 571 ntBASIC5.6□□□□□ -1.51
NKX2-3Q8TAU0 AC063976.4-201ENST00000421971 163 ntBASIC5.6□□□□□ -1.51
NKX2-3Q8TAU0 AL592045.1-201ENST00000429867 352 ntBASIC5.6□□□□□ -1.51
NKX2-3Q8TAU0 AC002465.1-201ENST00000436097 349 ntTSL 2 BASIC5.6□□□□□ -1.51
NKX2-3Q8TAU0 TMEM212-AS1-201ENST00000449106 427 ntTSL 3 BASIC5.6□□□□□ -1.51
NKX2-3Q8TAU0 AP000870.1-201ENST00000472927 406 ntBASIC5.6□□□□□ -1.51
NKX2-3Q8TAU0 MIR2116-201ENST00000517221 80 ntBASIC5.6□□□□□ -1.51
NKX2-3Q8TAU0 NDUFA5P6-201ENST00000542110 379 ntBASIC5.6□□□□□ -1.51
NKX2-3Q8TAU0 LINC01195-201ENST00000570118 451 ntTSL 3 BASIC5.6□□□□□ -1.51
NKX2-3Q8TAU0 AC008121.1-201ENST00000603244 268 ntBASIC5.6□□□□□ -1.51
NKX2-3Q8TAU0 LINC00904-201ENST00000604453 471 ntTSL 2 BASIC5.6□□□□□ -1.51
NKX2-3Q8TAU0 AC068831.7-201ENST00000616954 363 ntBASIC5.6□□□□□ -1.51
NKX2-3Q8TAU0 MIR4496-201ENST00000635896 61 ntBASIC5.6□□□□□ -1.51
NKX2-3Q8TAU0 CARF-208ENST00000428585 2513 ntTSL 2 BASIC5.6□□□□□ -1.51
NKX2-3Q8TAU0 FAM91A3P-201ENST00000456826 2544 ntBASIC5.6□□□□□ -1.51
NKX2-3Q8TAU0 ZNF26-201ENST00000328654 17601 ntAPPRIS P3 TSL 1 (best) BASIC5.6□□□□□ -1.51
NKX2-3Q8TAU0 AL079305.1-201ENST00000623159 3008 ntBASIC5.6□□□□□ -1.51
NKX2-3Q8TAU0 SALL4P2-201ENST00000423288 2910 ntBASIC5.6□□□□□ -1.51
NKX2-3Q8TAU0 GABRG1-201ENST00000295452 6785 ntAPPRIS P1 TSL 1 (best) BASIC5.6□□□□□ -1.51
NKX2-3Q8TAU0 AL121839.2-201ENST00000565058 6943 ntBASIC5.6□□□□□ -1.51
NKX2-3Q8TAU0 FAP-203ENST00000443424 2598 ntTSL 2 BASIC5.6□□□□□ -1.51
NKX2-3Q8TAU0 SLC26A7-209ENST00000617078 5094 ntTSL 5 BASIC5.59□□□□□ -1.51
NKX2-3Q8TAU0 SLC9C1-201ENST00000305815 4172 ntAPPRIS P3 TSL 2 BASIC5.59□□□□□ -1.51
NKX2-3Q8TAU0 ELOVL7-203ENST00000505959 4165 ntTSL 1 (best) BASIC5.59□□□□□ -1.51
NKX2-3Q8TAU0 PCDH15-201ENST00000320301 6845 ntTSL 1 (best) BASIC5.59□□□□□ -1.51
NKX2-3Q8TAU0 RNU6-103P-201ENST00000363686 107 ntBASIC5.59□□□□□ -1.51
NKX2-3Q8TAU0 MIR153-2-201ENST00000385225 87 ntBASIC5.59□□□□□ -1.51
NKX2-3Q8TAU0 RNU6-578P-201ENST00000390980 103 ntBASIC5.59□□□□□ -1.51
NKX2-3Q8TAU0 RNU6-381P-201ENST00000391259 108 ntBASIC5.59□□□□□ -1.51
NKX2-3Q8TAU0 BTF3L4P2-201ENST00000392798 346 ntBASIC5.59□□□□□ -1.51
NKX2-3Q8TAU0 AC114755.2-201ENST00000413520 361 ntBASIC5.59□□□□□ -1.51
NKX2-3Q8TAU0 AC092447.6-201ENST00000414578 210 ntBASIC5.59□□□□□ -1.51
NKX2-3Q8TAU0 ITCH-IT1-201ENST00000418598 208 ntTSL 3 BASIC5.59□□□□□ -1.51
NKX2-3Q8TAU0 GNG5P5-201ENST00000420444 220 ntBASIC5.59□□□□□ -1.51
NKX2-3Q8TAU0 GAS5-208ENST00000425771 242 ntTSL 3 BASIC5.59□□□□□ -1.51
NKX2-3Q8TAU0 AC110995.1-201ENST00000444185 628 ntTSL 3 BASIC5.59□□□□□ -1.51
NKX2-3Q8TAU0 AL589765.1-201ENST00000457548 386 ntTSL 2 BASIC5.59□□□□□ -1.51
NKX2-3Q8TAU0 RNU7-107P-201ENST00000459121 61 ntBASIC5.59□□□□□ -1.51
NKX2-3Q8TAU0 NIP7P2-201ENST00000485801 544 ntBASIC5.59□□□□□ -1.51
NKX2-3Q8TAU0 RPL21P13-201ENST00000488305 481 ntBASIC5.59□□□□□ -1.51
NKX2-3Q8TAU0 AC017015.2-201ENST00000497946 376 ntTSL 2 BASIC5.59□□□□□ -1.51
NKX2-3Q8TAU0 SNORD116-26-201ENST00000516006 96 ntBASIC5.59□□□□□ -1.51
NKX2-3Q8TAU0 AC008489.1-201ENST00000524271 483 ntBASIC5.59□□□□□ -1.51
NKX2-3Q8TAU0 LINC02350-201ENST00000544419 480 ntTSL 3 BASIC5.59□□□□□ -1.51
NKX2-3Q8TAU0 MIR4744-201ENST00000581563 82 ntBASIC5.59□□□□□ -1.51
NKX2-3Q8TAU0 AC015911.9-201ENST00000591634 185 ntTSL 5 BASIC5.59□□□□□ -1.51
NKX2-3Q8TAU0 AC005176.2-201ENST00000596933 147 ntBASIC5.59□□□□□ -1.51
NKX2-3Q8TAU0 OR10Z1-202ENST00000641002 6323 ntAPPRIS P1 BASIC5.59□□□□□ -1.51
NKX2-3Q8TAU0 CDK15-204ENST00000450471 3659 ntAPPRIS ALT1 TSL 1 (best) BASIC5.59□□□□□ -1.51
NKX2-3Q8TAU0 PCDH15-212ENST00000395442 2970 ntTSL 5 BASIC5.59□□□□□ -1.51
NKX2-3Q8TAU0 SEC31A-237ENST00000513858 3687 ntTSL 1 (best) BASIC5.59□□□□□ -1.52
NKX2-3Q8TAU0 TDRD3-204ENST00000377894 2484 ntTSL 2 BASIC5.58□□□□□ -1.52
NKX2-3Q8TAU0 OR56B2P-202ENST00000641377 2453 ntBASIC5.58□□□□□ -1.52
NKX2-3Q8TAU0 WDR63-203ENST00000370596 2905 ntAPPRIS ALT2 TSL 5 BASIC5.58□□□□□ -1.52
NKX2-3Q8TAU0 MED13-201ENST00000397786 10465 ntAPPRIS P1 TSL 1 (best) BASIC5.58□□□□□ -1.52
NKX2-3Q8TAU0 SCEL-205ENST00000535157 3096 ntAPPRIS ALT2 TSL 2 BASIC5.58□□□□□ -1.52
NKX2-3Q8TAU0 BCLAF1P2-201ENST00000624956 2609 ntBASIC5.58□□□□□ -1.52
NKX2-3Q8TAU0 RASA1-203ENST00000506290 3009 ntAPPRIS ALT2 TSL 2 BASIC5.58□□□□□ -1.52
NKX2-3Q8TAU0 MIR1250-201ENST00000408098 113 ntBASIC5.58□□□□□ -1.52
Retrieved 100 of 98,524 protein–RNA pairs in 85.7 ms