Protein–RNA interactions for Protein: Q86VH4

LRRTM4, Leucine-rich repeat transmembrane neuronal protein 4, humanhuman

Predictions only

Length 590 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LRRTM4Q86VH4 FAM35CP-201ENST00000554755 2470 ntBASIC3.19□□□□□ -1.9
LRRTM4Q86VH4 BCLAF1P1-201ENST00000505813 2752 ntBASIC3.19□□□□□ -1.9
LRRTM4Q86VH4 LINC00890-202ENST00000569275 4595 ntAPPRIS P1 TSL 1 (best) BASIC3.19□□□□□ -1.9
LRRTM4Q86VH4 ZFYVE16-202ENST00000505560 6599 ntAPPRIS P1 TSL 1 (best) BASIC3.19□□□□□ -1.9
LRRTM4Q86VH4 SOCS4-201ENST00000339298 6667 ntAPPRIS P1 TSL 1 (best) BASIC3.19□□□□□ -1.9
LRRTM4Q86VH4 ATP2C1-202ENST00000359644 3401 ntAPPRIS P3 TSL 1 (best) BASIC3.19□□□□□ -1.9
LRRTM4Q86VH4 AL354685.2-201ENST00000448218 1447 ntBASIC3.19□□□□□ -1.9
LRRTM4Q86VH4 PRKACB-219ENST00000614872 4306 ntTSL 1 (best) BASIC3.18□□□□□ -1.9
LRRTM4Q86VH4 C6orf10-202ENST00000375015 2173 ntAPPRIS ALT2 TSL 5 BASIC3.18□□□□□ -1.9
LRRTM4Q86VH4 LUZP2-208ENST00000620308 4981 ntTSL 5 BASIC3.18□□□□□ -1.9
LRRTM4Q86VH4 RNU6-1280P-201ENST00000365211 107 ntBASIC3.18□□□□□ -1.9
LRRTM4Q86VH4 RNU6-393P-201ENST00000384475 107 ntBASIC3.18□□□□□ -1.9
LRRTM4Q86VH4 Y_RNA.516-201ENST00000384541 124 ntBASIC3.18□□□□□ -1.9
LRRTM4Q86VH4 AL590002.1-201ENST00000406554 418 ntBASIC3.18□□□□□ -1.9
LRRTM4Q86VH4 SNORA11.1-201ENST00000408133 129 ntBASIC3.18□□□□□ -1.9
LRRTM4Q86VH4 OFD1P1Y-201ENST00000411756 1225 ntBASIC3.18□□□□□ -1.9
LRRTM4Q86VH4 AL355674.1-201ENST00000423681 648 ntTSL 1 (best) BASIC3.18□□□□□ -1.9
LRRTM4Q86VH4 AC007271.1-201ENST00000428188 382 ntTSL 3 BASIC3.18□□□□□ -1.9
LRRTM4Q86VH4 AL583835.2-201ENST00000435483 500 ntTSL 2 BASIC3.18□□□□□ -1.9
LRRTM4Q86VH4 AL136972.1-201ENST00000443471 351 ntTSL 3 BASIC3.18□□□□□ -1.9
LRRTM4Q86VH4 RPS3AP12-201ENST00000443616 753 ntBASIC3.18□□□□□ -1.9
LRRTM4Q86VH4 AC004888.1-201ENST00000450480 547 ntTSL 2 BASIC3.18□□□□□ -1.9
LRRTM4Q86VH4 AL441985.1-201ENST00000457727 251 ntBASIC3.18□□□□□ -1.9
LRRTM4Q86VH4 AC008948.1-201ENST00000506058 325 ntTSL 2 BASIC3.18□□□□□ -1.9
LRRTM4Q86VH4 AC079140.5-201ENST00000507882 310 ntBASIC3.18□□□□□ -1.9
LRRTM4Q86VH4 AC074344.1-201ENST00000512823 224 ntBASIC3.18□□□□□ -1.9
LRRTM4Q86VH4 UQCRB-202ENST00000517523 515 ntTSL 2 BASIC3.18□□□□□ -1.9
LRRTM4Q86VH4 FAM92A-209ENST00000519679 538 ntTSL 4 BASIC3.18□□□□□ -1.9
LRRTM4Q86VH4 OR5AQ1P-201ENST00000527596 927 ntBASIC3.18□□□□□ -1.9
LRRTM4Q86VH4 AC009269.3-201ENST00000558429 472 ntTSL 5 BASIC3.18□□□□□ -1.9
LRRTM4Q86VH4 AC026470.3-201ENST00000563994 438 ntTSL 3 BASIC3.18□□□□□ -1.9
LRRTM4Q86VH4 AC092325.1-201ENST00000566449 554 ntBASIC3.18□□□□□ -1.9
LRRTM4Q86VH4 AC025678.1-201ENST00000567861 338 ntBASIC3.18□□□□□ -1.9
LRRTM4Q86VH4 AC011471.1-201ENST00000585766 187 ntBASIC3.18□□□□□ -1.9
LRRTM4Q86VH4 AC090227.2-201ENST00000591105 340 ntTSL 5 BASIC3.18□□□□□ -1.9
LRRTM4Q86VH4 AC073539.2-201ENST00000597113 165 ntBASIC3.18□□□□□ -1.9
LRRTM4Q86VH4 AC010620.2-201ENST00000600135 313 ntBASIC3.18□□□□□ -1.9
LRRTM4Q86VH4 AL391813.1-201ENST00000603098 260 ntBASIC3.18□□□□□ -1.9
LRRTM4Q86VH4 AC092954.2-201ENST00000609103 430 ntBASIC3.18□□□□□ -1.9
LRRTM4Q86VH4 AC122108.2-201ENST00000611946 526 ntBASIC3.18□□□□□ -1.9
LRRTM4Q86VH4 AL442067.2-201ENST00000614033 363 ntBASIC3.18□□□□□ -1.9
LRRTM4Q86VH4 RMST_4.1-201ENST00000616886 107 ntBASIC3.18□□□□□ -1.9
LRRTM4Q86VH4 U4.5-201ENST00000617137 123 ntBASIC3.18□□□□□ -1.9
LRRTM4Q86VH4 uc_338.34-201ENST00000617467 174 ntBASIC3.18□□□□□ -1.9
LRRTM4Q86VH4 SCARNA4-202ENST00000625402 129 ntBASIC3.18□□□□□ -1.9
LRRTM4Q86VH4 PCNP-208ENST00000627393 136 ntTSL 2 BASIC3.18□□□□□ -1.9
LRRTM4Q86VH4 CNOT1-223ENST00000628857 291 ntTSL 5 BASIC3.18□□□□□ -1.9
LRRTM4Q86VH4 MIR3651-201ENST00000630427 90 ntBASIC3.18□□□□□ -1.9
LRRTM4Q86VH4 MKLN1-201ENST00000352689 11156 ntAPPRIS P1 TSL 1 (best) BASIC3.18□□□□□ -1.9
LRRTM4Q86VH4 HSFY2-201ENST00000304790 1444 ntAPPRIS P5 TSL 1 (best) BASIC3.18□□□□□ -1.9
LRRTM4Q86VH4 HSFY1-201ENST00000307393 1444 ntAPPRIS P5 TSL 1 (best) BASIC3.18□□□□□ -1.9
LRRTM4Q86VH4 CEP85L-202ENST00000368488 7118 ntTSL 5 BASIC3.17□□□□□ -1.9
LRRTM4Q86VH4 CLOCK-201ENST00000309964 10304 ntAPPRIS P1 TSL 1 (best) BASIC3.17□□□□□ -1.9
LRRTM4Q86VH4 FAM107B-204ENST00000378465 1052 ntAPPRIS P1 TSL 2 BASIC3.17□□□□□ -1.9
LRRTM4Q86VH4 SNORA69-201ENST00000383895 132 ntBASIC3.17□□□□□ -1.9
LRRTM4Q86VH4 RNU6-1127P-201ENST00000384580 107 ntBASIC3.17□□□□□ -1.9
LRRTM4Q86VH4 RNU6-19P-201ENST00000384718 107 ntBASIC3.17□□□□□ -1.9
LRRTM4Q86VH4 MIR518D-201ENST00000385014 87 ntBASIC3.17□□□□□ -1.9
LRRTM4Q86VH4 MIR147B-201ENST00000390185 80 ntBASIC3.17□□□□□ -1.9
LRRTM4Q86VH4 AL592114.1-201ENST00000403842 483 ntBASIC3.17□□□□□ -1.9
LRRTM4Q86VH4 U3.37-201ENST00000408528 213 ntBASIC3.17□□□□□ -1.9
LRRTM4Q86VH4 CTNNA2-204ENST00000409266 432 ntTSL 3 BASIC3.17□□□□□ -1.9
LRRTM4Q86VH4 AL592148.1-201ENST00000413568 445 ntBASIC3.17□□□□□ -1.9
LRRTM4Q86VH4 LINC01707-201ENST00000425517 627 ntTSL 3 BASIC3.17□□□□□ -1.9
LRRTM4Q86VH4 AL669831.1-202ENST00000428504 417 ntBASIC3.17□□□□□ -1.9
LRRTM4Q86VH4 SAR1AP4-201ENST00000429225 591 ntBASIC3.17□□□□□ -1.9
LRRTM4Q86VH4 AF124730.1-201ENST00000430001 327 ntTSL 2 BASIC3.17□□□□□ -1.9
LRRTM4Q86VH4 AL139397.1-201ENST00000430456 644 ntTSL 2 BASIC3.17□□□□□ -1.9
LRRTM4Q86VH4 GTF2IP13-201ENST00000438487 386 ntBASIC3.17□□□□□ -1.9
LRRTM4Q86VH4 SEPT14P3-201ENST00000439401 183 ntBASIC3.17□□□□□ -1.9
LRRTM4Q86VH4 AC024908.1-202ENST00000441907 764 ntTSL 2 BASIC3.17□□□□□ -1.9
LRRTM4Q86VH4 AL732372.2-207ENST00000445840 183 ntBASIC3.17□□□□□ -1.9
LRRTM4Q86VH4 AC125238.1-201ENST00000448842 249 ntBASIC3.17□□□□□ -1.9
LRRTM4Q86VH4 AL020994.3-201ENST00000449126 274 ntTSL 3 BASIC3.17□□□□□ -1.9
LRRTM4Q86VH4 AC010974.1-201ENST00000450509 374 ntTSL 3 BASIC3.17□□□□□ -1.9
LRRTM4Q86VH4 SEPT14P2-201ENST00000453405 183 ntBASIC3.17□□□□□ -1.9
LRRTM4Q86VH4 TH2LCRR-203ENST00000457489 439 ntTSL 3 BASIC3.17□□□□□ -1.9
LRRTM4Q86VH4 SCARNA18-201ENST00000459004 134 ntBASIC3.17□□□□□ -1.9
LRRTM4Q86VH4 UMAD1-204ENST00000482067 569 ntTSL 5 BASIC3.17□□□□□ -1.9
LRRTM4Q86VH4 AC011005.2-201ENST00000487324 359 ntBASIC3.17□□□□□ -1.9
LRRTM4Q86VH4 AC092185.1-201ENST00000491371 97 ntBASIC3.17□□□□□ -1.9
LRRTM4Q86VH4 GZMAP1-201ENST00000503054 631 ntBASIC3.17□□□□□ -1.9
LRRTM4Q86VH4 SEPT14P4-201ENST00000513445 186 ntBASIC3.17□□□□□ -1.9
LRRTM4Q86VH4 RNU4ATAC15P-201ENST00000516415 126 ntBASIC3.17□□□□□ -1.9
LRRTM4Q86VH4 SNORA70.24-201ENST00000517233 118 ntBASIC3.17□□□□□ -1.9
LRRTM4Q86VH4 AP001205.1-201ENST00000521625 449 ntTSL 3 BASIC3.17□□□□□ -1.9
LRRTM4Q86VH4 CDKL3-207ENST00000521755 586 ntTSL 5 BASIC3.17□□□□□ -1.9
LRRTM4Q86VH4 FO082796.1-201ENST00000523795 183 ntBASIC3.17□□□□□ -1.9
LRRTM4Q86VH4 AP004607.1-201ENST00000524456 203 ntBASIC3.17□□□□□ -1.9
LRRTM4Q86VH4 AC007368.1-201ENST00000536422 974 ntTSL 5 BASIC3.17□□□□□ -1.9
LRRTM4Q86VH4 GLYCAM1-202ENST00000546607 553 ntTSL 1 (best) BASIC3.17□□□□□ -1.9
LRRTM4Q86VH4 AL049775.2-201ENST00000557547 558 ntTSL 4 BASIC3.17□□□□□ -1.9
LRRTM4Q86VH4 AC009269.4-201ENST00000557828 440 ntTSL 3 BASIC3.17□□□□□ -1.9
LRRTM4Q86VH4 LRRC37A5P-203ENST00000580181 585 ntBASIC3.17□□□□□ -1.9
LRRTM4Q86VH4 AC068790.6-201ENST00000602558 258 ntBASIC3.17□□□□□ -1.9
LRRTM4Q86VH4 YPEL5P2-201ENST00000605553 359 ntBASIC3.17□□□□□ -1.9
LRRTM4Q86VH4 USP12-203ENST00000620323 349 ntTSL 3 BASIC3.17□□□□□ -1.9
LRRTM4Q86VH4 AC022418.1-201ENST00000624118 445 ntBASIC3.17□□□□□ -1.9
LRRTM4Q86VH4 KNL1-202ENST00000399668 7607 ntAPPRIS ALT2 TSL 1 (best) BASIC3.17□□□□□ -1.9
LRRTM4Q86VH4 AK9-203ENST00000368948 2478 ntTSL 5 BASIC3.17□□□□□ -1.9
Retrieved 100 of 98,524 protein–RNA pairs in 112.4 ms