Protein–RNA interactions for Protein: Q86UQ8

NFE4, Transcription factor NF-E4, humanhuman

Predictions only

Length 179 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NFE4Q86UQ8 CAB39L-206ENST00000410043 1627 ntAPPRIS P1 TSL 1 (best) BASIC2.7□□□□□ -1.98
NFE4Q86UQ8 LINC01416-201ENST00000563553 2310 ntTSL 1 (best) BASIC2.7□□□□□ -1.98
NFE4Q86UQ8 BRCA2-206ENST00000544455 10984 ntAPPRIS P1 TSL 1 (best) BASIC2.7□□□□□ -1.98
NFE4Q86UQ8 MBNL1-206ENST00000357472 5256 ntTSL 5 BASIC2.7□□□□□ -1.98
NFE4Q86UQ8 MBNL1-223ENST00000498502 5258 ntTSL 5 BASIC2.7□□□□□ -1.98
NFE4Q86UQ8 RAB3C-201ENST00000282878 8896 ntAPPRIS P1 TSL 1 (best) BASIC2.69□□□□□ -1.98
NFE4Q86UQ8 CNOT4-202ENST00000356162 2594 ntTSL 5 BASIC2.69□□□□□ -1.98
NFE4Q86UQ8 FBXL13-204ENST00000436908 2577 ntTSL 5 BASIC2.69□□□□□ -1.98
NFE4Q86UQ8 MS4A1-212ENST00000534668 3475 ntAPPRIS P1 TSL 2 BASIC2.69□□□□□ -1.98
NFE4Q86UQ8 SRP72P2-201ENST00000344851 1979 ntBASIC2.69□□□□□ -1.98
NFE4Q86UQ8 MIR412-201ENST00000362142 91 ntBASIC2.69□□□□□ -1.98
NFE4Q86UQ8 MIR372-201ENST00000362225 67 ntBASIC2.69□□□□□ -1.98
NFE4Q86UQ8 RNU4-76P-201ENST00000364509 141 ntBASIC2.69□□□□□ -1.98
NFE4Q86UQ8 SNORD14B-201ENST00000364533 90 ntBASIC2.69□□□□□ -1.98
NFE4Q86UQ8 Y_RNA.259-201ENST00000364619 101 ntBASIC2.69□□□□□ -1.98
NFE4Q86UQ8 RNU6-283P-201ENST00000364788 107 ntBASIC2.69□□□□□ -1.98
NFE4Q86UQ8 TRAV39-201ENST00000390466 331 ntAPPRIS P1 BASIC2.69□□□□□ -1.98
NFE4Q86UQ8 AL591034.1-201ENST00000407447 340 ntBASIC2.69□□□□□ -1.98
NFE4Q86UQ8 RN7SKP158-201ENST00000410453 326 ntBASIC2.69□□□□□ -1.98
NFE4Q86UQ8 RN7SKP27-201ENST00000410684 333 ntBASIC2.69□□□□□ -1.98
NFE4Q86UQ8 Y_RNA.623-201ENST00000411128 95 ntBASIC2.69□□□□□ -1.98
NFE4Q86UQ8 AL139247.1-201ENST00000422768 325 ntBASIC2.69□□□□□ -1.98
NFE4Q86UQ8 U51244.1-201ENST00000423120 374 ntTSL 3 BASIC2.69□□□□□ -1.98
NFE4Q86UQ8 TMEM167AP1-201ENST00000423409 219 ntBASIC2.69□□□□□ -1.98
NFE4Q86UQ8 AL589935.1-209ENST00000432050 418 ntTSL 5 BASIC2.69□□□□□ -1.98
NFE4Q86UQ8 AL024508.1-201ENST00000432477 505 ntTSL 2 BASIC2.69□□□□□ -1.98
NFE4Q86UQ8 AL359672.1-201ENST00000442302 409 ntBASIC2.69□□□□□ -1.98
NFE4Q86UQ8 LAMTOR5P1-201ENST00000444290 270 ntBASIC2.69□□□□□ -1.98
NFE4Q86UQ8 AC007677.1-201ENST00000445757 515 ntBASIC2.69□□□□□ -1.98
NFE4Q86UQ8 MTND1P17-201ENST00000448961 204 ntBASIC2.69□□□□□ -1.98
NFE4Q86UQ8 RNU7-138P-201ENST00000459479 64 ntBASIC2.69□□□□□ -1.98
NFE4Q86UQ8 AC130509.1-201ENST00000464158 433 ntBASIC2.69□□□□□ -1.98
NFE4Q86UQ8 AP002884.2-201ENST00000471647 395 ntBASIC2.69□□□□□ -1.98
NFE4Q86UQ8 SEMA6A-AS1-204ENST00000510682 521 ntTSL 5 BASIC2.69□□□□□ -1.98
NFE4Q86UQ8 AC092436.3-201ENST00000511788 257 ntBASIC2.69□□□□□ -1.98
NFE4Q86UQ8 AC026402.1-201ENST00000513642 170 ntBASIC2.69□□□□□ -1.98
NFE4Q86UQ8 Y_RNA.701-201ENST00000516812 110 ntBASIC2.69□□□□□ -1.98
NFE4Q86UQ8 AC100801.1-202ENST00000518266 371 ntTSL 3 BASIC2.69□□□□□ -1.98
NFE4Q86UQ8 AC104576.1-201ENST00000524225 88 ntBASIC2.69□□□□□ -1.98
NFE4Q86UQ8 AP002004.1-207ENST00000531371 526 ntTSL 1 (best) BASIC2.69□□□□□ -1.98
NFE4Q86UQ8 AP000462.3-201ENST00000545593 330 ntTSL 5 BASIC2.69□□□□□ -1.98
NFE4Q86UQ8 AC007151.1-201ENST00000572774 483 ntBASIC2.69□□□□□ -1.98
NFE4Q86UQ8 MIR5685-201ENST00000579080 79 ntBASIC2.69□□□□□ -1.98
NFE4Q86UQ8 MIR6868-201ENST00000611215 58 ntBASIC2.69□□□□□ -1.98
NFE4Q86UQ8 XIST_intron.1-201ENST00000619444 68 ntBASIC2.69□□□□□ -1.98
NFE4Q86UQ8 NRDE2-210ENST00000628832 132 ntTSL 5 BASIC2.69□□□□□ -1.98
NFE4Q86UQ8 AP001148.1-201ENST00000624124 2359 ntBASIC2.69□□□□□ -1.98
NFE4Q86UQ8 LINC01376-202ENST00000424895 1949 ntTSL 2 BASIC2.69□□□□□ -1.98
NFE4Q86UQ8 SAMD3-214ENST00000532763 3690 ntTSL 5 BASIC2.69□□□□□ -1.98
NFE4Q86UQ8 AC091152.2-201ENST00000591628 2569 ntBASIC2.69□□□□□ -1.98
NFE4Q86UQ8 SUGT1-201ENST00000310528 14131 ntAPPRIS P3 TSL 1 (best) BASIC2.69□□□□□ -1.98
NFE4Q86UQ8 ACTR6-212ENST00000552376 1659 ntTSL 5 BASIC2.69□□□□□ -1.98
NFE4Q86UQ8 DPP10-205ENST00000410059 6278 ntAPPRIS ALT2 TSL 1 (best) BASIC2.69□□□□□ -1.98
NFE4Q86UQ8 WDR49-201ENST00000308378 2594 ntAPPRIS P2 TSL 1 (best) BASIC2.68□□□□□ -1.98
NFE4Q86UQ8 ZNF807-201ENST00000328088 1707 ntBASIC2.68□□□□□ -1.98
NFE4Q86UQ8 AC058791.1-201ENST00000608412 3198 ntBASIC2.68□□□□□ -1.98
NFE4Q86UQ8 CCDC30-212ENST00000507855 2445 ntAPPRIS ALT2 TSL 1 (best) BASIC2.68□□□□□ -1.98
NFE4Q86UQ8 LIG4-201ENST00000356922 4096 ntAPPRIS P1 TSL 1 (best) BASIC2.68□□□□□ -1.98
NFE4Q86UQ8 CHM-205ENST00000615443 2821 ntTSL 1 (best) BASIC2.68□□□□□ -1.98
NFE4Q86UQ8 DOCK7-202ENST00000340370 6731 ntAPPRIS P3 TSL 2 BASIC2.68□□□□□ -1.98
NFE4Q86UQ8 POSTN-209ENST00000541179 3214 ntAPPRIS ALT2 TSL 1 (best) BASIC2.68□□□□□ -1.98
NFE4Q86UQ8 RNU6-217P-201ENST00000384164 104 ntBASIC2.68□□□□□ -1.98
NFE4Q86UQ8 RNU6-166P-201ENST00000384371 107 ntBASIC2.68□□□□□ -1.98
NFE4Q86UQ8 SNORD116-29-201ENST00000384516 83 ntBASIC2.68□□□□□ -1.98
NFE4Q86UQ8 RNU6-1011P-201ENST00000384668 107 ntBASIC2.68□□□□□ -1.98
NFE4Q86UQ8 MIR10A-201ENST00000385043 110 ntBASIC2.68□□□□□ -1.98
NFE4Q86UQ8 SNORA40C-201ENST00000391285 128 ntBASIC2.68□□□□□ -1.98
NFE4Q86UQ8 SNORA3.3-201ENST00000408712 125 ntBASIC2.68□□□□□ -1.98
NFE4Q86UQ8 RNU6-370P-201ENST00000411008 104 ntBASIC2.68□□□□□ -1.98
NFE4Q86UQ8 RPL9P9-201ENST00000418824 636 ntTSL 2 BASIC2.68□□□□□ -1.98
NFE4Q86UQ8 SKA2P1-201ENST00000425592 390 ntBASIC2.68□□□□□ -1.98
NFE4Q86UQ8 AC092162.2-204ENST00000451851 566 ntTSL 4 BASIC2.68□□□□□ -1.98
NFE4Q86UQ8 AC006539.3-201ENST00000454258 129 ntBASIC2.68□□□□□ -1.98
NFE4Q86UQ8 SNORD19B-201ENST00000459623 84 ntBASIC2.68□□□□□ -1.98
NFE4Q86UQ8 AC084198.1-201ENST00000477747 402 ntBASIC2.68□□□□□ -1.98
NFE4Q86UQ8 AC108037.1-201ENST00000514103 423 ntTSL 3 BASIC2.68□□□□□ -1.98
NFE4Q86UQ8 RNU1-61P-201ENST00000516107 151 ntBASIC2.68□□□□□ -1.98
NFE4Q86UQ8 RNU6-1282P-201ENST00000516735 96 ntBASIC2.68□□□□□ -1.98
NFE4Q86UQ8 AC069113.1-201ENST00000517763 267 ntBASIC2.68□□□□□ -1.98
NFE4Q86UQ8 AC026371.1-201ENST00000551867 419 ntBASIC2.68□□□□□ -1.98
NFE4Q86UQ8 AC008056.1-201ENST00000553322 394 ntTSL 3 BASIC2.68□□□□□ -1.98
NFE4Q86UQ8 AC020891.1-201ENST00000558785 174 ntTSL 3 BASIC2.68□□□□□ -1.98
NFE4Q86UQ8 H3F3AP1-201ENST00000559984 334 ntBASIC2.68□□□□□ -1.98
NFE4Q86UQ8 AC026462.3-202ENST00000564361 515 ntTSL 3 BASIC2.68□□□□□ -1.98
NFE4Q86UQ8 RBBP8-210ENST00000581687 617 ntTSL 2 BASIC2.68□□□□□ -1.98
NFE4Q86UQ8 LINC01028-202ENST00000588782 458 ntTSL 3 BASIC2.68□□□□□ -1.98
NFE4Q86UQ8 AL137849.1-201ENST00000604767 169 ntBASIC2.68□□□□□ -1.98
NFE4Q86UQ8 ELOCP5-201ENST00000604924 333 ntBASIC2.68□□□□□ -1.98
NFE4Q86UQ8 SCOC-AS1-203ENST00000609616 405 ntTSL 3 BASIC2.68□□□□□ -1.98
NFE4Q86UQ8 FTX_3.1-201ENST00000610451 147 ntBASIC2.68□□□□□ -1.98
NFE4Q86UQ8 AC099778.2-201ENST00000610904 211 ntBASIC2.68□□□□□ -1.98
NFE4Q86UQ8 MIR6128-201ENST00000615528 109 ntBASIC2.68□□□□□ -1.98
NFE4Q86UQ8 AC084781.2-201ENST00000615568 161 ntBASIC2.68□□□□□ -1.98
NFE4Q86UQ8 MIR8058-201ENST00000615737 89 ntBASIC2.68□□□□□ -1.98
NFE4Q86UQ8 RMST_4.1-201ENST00000616886 107 ntBASIC2.68□□□□□ -1.98
NFE4Q86UQ8 HOTAIRM1_5.1-201ENST00000619311 145 ntBASIC2.68□□□□□ -1.98
NFE4Q86UQ8 AL160413.1-201ENST00000622780 310 ntBASIC2.68□□□□□ -1.98
NFE4Q86UQ8 U6.99-201ENST00000637524 83 ntBASIC2.68□□□□□ -1.98
NFE4Q86UQ8 OR6C2-203ENST00000641516 1682 ntAPPRIS P1 BASIC2.68□□□□□ -1.98
NFE4Q86UQ8 FNDC3A-202ENST00000398316 5714 ntTSL 1 (best) BASIC2.68□□□□□ -1.98
Retrieved 100 of 98,524 protein–RNA pairs in 144.5 ms