Protein–RNA interactions for Protein: Q6Q0C0

TRAF7, E3 ubiquitin-protein ligase TRAF7, humanhuman

Predictions only

Length 670 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRAF7Q6Q0C0 UBE2Q2P9-201ENST00000490086 202 ntBASIC5.48□□□□□ -1.53
TRAF7Q6Q0C0 AC004917.1-201ENST00000490856 575 ntTSL 4 BASIC5.48□□□□□ -1.53
TRAF7Q6Q0C0 AC025741.1-201ENST00000506100 544 ntTSL 4 BASIC5.48□□□□□ -1.53
TRAF7Q6Q0C0 AP001880.2-201ENST00000538233 448 ntBASIC5.48□□□□□ -1.53
TRAF7Q6Q0C0 AC126323.3-201ENST00000565136 564 ntTSL 4 BASIC5.48□□□□□ -1.53
TRAF7Q6Q0C0 AC002545.1-201ENST00000592511 181 ntBASIC5.48□□□□□ -1.53
TRAF7Q6Q0C0 FAM71BP1-201ENST00000604431 523 ntBASIC5.48□□□□□ -1.53
TRAF7Q6Q0C0 SSX9-202ENST00000608568 580 ntTSL 4 BASIC5.48□□□□□ -1.53
TRAF7Q6Q0C0 FGF1-215ENST00000619447 3818 ntAPPRIS P1 TSL 4 BASIC5.48□□□□□ -1.53
TRAF7Q6Q0C0 MTRR-202ENST00000440940 3215 ntAPPRIS P1 TSL 1 (best) BASIC5.48□□□□□ -1.53
TRAF7Q6Q0C0 STX3-208ENST00000641815 3236 ntBASIC5.48□□□□□ -1.53
TRAF7Q6Q0C0 AKAP6-212ENST00000557272 4601 ntTSL 5 BASIC5.48□□□□□ -1.53
TRAF7Q6Q0C0 LCLAT1-203ENST00000379509 4888 ntAPPRIS P1 TSL 1 (best) BASIC5.48□□□□□ -1.53
TRAF7Q6Q0C0 FANCD2-202ENST00000383807 5102 ntAPPRIS ALT2 TSL 1 (best) BASIC5.48□□□□□ -1.53
TRAF7Q6Q0C0 ZNF415-201ENST00000243643 2270 ntAPPRIS P3 TSL 1 (best) BASIC5.48□□□□□ -1.53
TRAF7Q6Q0C0 IL31RA-204ENST00000396834 2903 ntAPPRIS ALT2 TSL 1 (best) BASIC5.47□□□□□ -1.53
TRAF7Q6Q0C0 TBC1D23-201ENST00000344949 3656 ntAPPRIS P1 TSL 1 (best) BASIC5.47□□□□□ -1.53
TRAF7Q6Q0C0 GEN1-202ENST00000381254 6367 ntAPPRIS P1 TSL 5 BASIC5.47□□□□□ -1.53
TRAF7Q6Q0C0 SDHC-202ENST00000367975 13566 ntAPPRIS P1 TSL 1 (best) BASIC5.47□□□□□ -1.53
TRAF7Q6Q0C0 LMO3-201ENST00000261169 3810 ntTSL 1 (best) BASIC5.47□□□□□ -1.53
TRAF7Q6Q0C0 CSMD3-204ENST00000455883 12485 ntTSL 1 (best) BASIC5.47□□□□□ -1.53
TRAF7Q6Q0C0 ZNF418-205ENST00000595830 3543 ntAPPRIS P3 TSL 1 (best) BASIC5.47□□□□□ -1.53
TRAF7Q6Q0C0 RALGAPA1-204ENST00000553892 6271 ntTSL 5 BASIC5.47□□□□□ -1.53
TRAF7Q6Q0C0 LINC01541-202ENST00000568095 3105 ntTSL 1 (best) BASIC5.47□□□□□ -1.53
TRAF7Q6Q0C0 AL079305.1-201ENST00000623159 3008 ntBASIC5.47□□□□□ -1.53
TRAF7Q6Q0C0 AP002512.4-201ENST00000641310 4672 ntAPPRIS P1 BASIC5.47□□□□□ -1.53
TRAF7Q6Q0C0 BMPR2-201ENST00000374574 9683 ntTSL 2 BASIC5.47□□□□□ -1.53
TRAF7Q6Q0C0 PCDH15-207ENST00000395430 7002 ntTSL 5 BASIC5.47□□□□□ -1.53
TRAF7Q6Q0C0 Y_RNA.33-201ENST00000362591 102 ntBASIC5.47□□□□□ -1.53
TRAF7Q6Q0C0 Y_RNA.230-201ENST00000364348 109 ntBASIC5.47□□□□□ -1.53
TRAF7Q6Q0C0 RNU6-1107P-201ENST00000364817 104 ntBASIC5.47□□□□□ -1.53
TRAF7Q6Q0C0 RNU6-279P-201ENST00000391297 101 ntBASIC5.47□□□□□ -1.53
TRAF7Q6Q0C0 U6atac.2-201ENST00000408644 118 ntBASIC5.47□□□□□ -1.53
TRAF7Q6Q0C0 LINC00894-201ENST00000413076 403 ntTSL 3 BASIC5.47□□□□□ -1.53
TRAF7Q6Q0C0 RPL18P10-201ENST00000425606 538 ntBASIC5.47□□□□□ -1.53
TRAF7Q6Q0C0 AC006028.1-201ENST00000438379 402 ntBASIC5.47□□□□□ -1.53
TRAF7Q6Q0C0 RPS5P7-201ENST00000456664 608 ntBASIC5.47□□□□□ -1.53
TRAF7Q6Q0C0 RN7SL385P-201ENST00000468873 276 ntBASIC5.47□□□□□ -1.53
TRAF7Q6Q0C0 HSPE1P6-201ENST00000479457 291 ntBASIC5.47□□□□□ -1.53
TRAF7Q6Q0C0 AC009446.1-202ENST00000521131 473 ntTSL 3 BASIC5.47□□□□□ -1.53
TRAF7Q6Q0C0 LINC02095-202ENST00000543512 323 ntTSL 3 BASIC5.47□□□□□ -1.53
TRAF7Q6Q0C0 MIR7853-201ENST00000584820 132 ntBASIC5.47□□□□□ -1.53
TRAF7Q6Q0C0 VN1R85P-201ENST00000601587 426 ntBASIC5.47□□□□□ -1.53
TRAF7Q6Q0C0 AC009314.1-201ENST00000603871 304 ntBASIC5.47□□□□□ -1.53
TRAF7Q6Q0C0 MIR6133-201ENST00000617057 108 ntBASIC5.47□□□□□ -1.53
TRAF7Q6Q0C0 ASB14-201ENST00000389601 3175 ntAPPRIS ALT2 TSL 5 BASIC5.47□□□□□ -1.53
TRAF7Q6Q0C0 ELAVL4-203ENST00000371821 3349 ntTSL 5 BASIC5.47□□□□□ -1.53
TRAF7Q6Q0C0 AL450326.2-201ENST00000421913 1962 ntBASIC5.47□□□□□ -1.53
TRAF7Q6Q0C0 STRBP-204ENST00000447404 6161 ntAPPRIS P1 TSL 2 BASIC5.47□□□□□ -1.53
TRAF7Q6Q0C0 RNF128-202ENST00000324342 2654 ntTSL 1 (best) BASIC5.47□□□□□ -1.53
TRAF7Q6Q0C0 FAR2-203ENST00000547116 1787 ntTSL 2 BASIC5.47□□□□□ -1.53
TRAF7Q6Q0C0 SEC31A-209ENST00000500777 3610 ntTSL 5 BASIC5.47□□□□□ -1.53
TRAF7Q6Q0C0 BBX-206ENST00000415149 8930 ntAPPRIS P3 TSL 1 (best) BASIC5.47□□□□□ -1.53
TRAF7Q6Q0C0 TRIM69-201ENST00000329464 1901 ntAPPRIS P1 TSL 1 (best) BASIC5.46□□□□□ -1.53
TRAF7Q6Q0C0 ZNF788-203ENST00000430298 3941 ntTSL 2 BASIC5.46□□□□□ -1.53
TRAF7Q6Q0C0 AC093591.2-201ENST00000565254 3843 ntBASIC5.46□□□□□ -1.53
TRAF7Q6Q0C0 DOCK9-207ENST00000442173 7643 ntAPPRIS ALT2 TSL 5 BASIC5.46□□□□□ -1.53
TRAF7Q6Q0C0 HERC4-205ENST00000412272 4211 ntTSL 1 (best) BASIC5.46□□□□□ -1.54
TRAF7Q6Q0C0 SLC25A46-204ENST00000504098 2345 ntTSL 5 BASIC5.46□□□□□ -1.54
TRAF7Q6Q0C0 PRKAA1-204ENST00000397128 5088 ntAPPRIS P1 TSL 1 (best) BASIC5.46□□□□□ -1.54
TRAF7Q6Q0C0 UACA-211ENST00000560441 4723 ntAPPRIS ALT2 TSL 5 BASIC5.46□□□□□ -1.54
TRAF7Q6Q0C0 BCLAF1-201ENST00000353331 7110 ntTSL 5 BASIC5.46□□□□□ -1.54
TRAF7Q6Q0C0 F2RL2-201ENST00000296641 3429 ntAPPRIS P1 TSL 1 (best) BASIC5.46□□□□□ -1.54
TRAF7Q6Q0C0 HELLS-201ENST00000239026 2740 ntTSL 5 BASIC5.46□□□□□ -1.54
TRAF7Q6Q0C0 MT-ATP8-201ENST00000361851 207 ntAPPRIS P1 BASIC5.46□□□□□ -1.54
TRAF7Q6Q0C0 RNU6-961P-201ENST00000363893 105 ntBASIC5.46□□□□□ -1.54
TRAF7Q6Q0C0 RNU6-173P-201ENST00000364215 104 ntBASIC5.46□□□□□ -1.54
TRAF7Q6Q0C0 BPY2-202ENST00000382585 321 ntAPPRIS P5 TSL 1 (best) BASIC5.46□□□□□ -1.54
TRAF7Q6Q0C0 RNU6-213P-201ENST00000384051 104 ntBASIC5.46□□□□□ -1.54
TRAF7Q6Q0C0 TRAV21-201ENST00000390449 343 ntAPPRIS P1 BASIC5.46□□□□□ -1.54
TRAF7Q6Q0C0 RPL7AP49-201ENST00000429522 581 ntBASIC5.46□□□□□ -1.54
TRAF7Q6Q0C0 AL591438.1-201ENST00000433508 581 ntBASIC5.46□□□□□ -1.54
TRAF7Q6Q0C0 SUMO2P6-201ENST00000505273 288 ntBASIC5.46□□□□□ -1.54
TRAF7Q6Q0C0 AC084851.1-201ENST00000529105 249 ntBASIC5.46□□□□□ -1.54
TRAF7Q6Q0C0 TRAV37-201ENST00000553906 342 ntBASIC5.46□□□□□ -1.54
TRAF7Q6Q0C0 LINC01584-202ENST00000563990 852 ntTSL 3 BASIC5.46□□□□□ -1.54
TRAF7Q6Q0C0 MIR3145-201ENST00000580727 82 ntBASIC5.46□□□□□ -1.54
TRAF7Q6Q0C0 BPY2B-204ENST00000615850 321 ntAPPRIS P5 TSL 1 (best) BASIC5.46□□□□□ -1.54
TRAF7Q6Q0C0 AC068831.7-201ENST00000616954 363 ntBASIC5.46□□□□□ -1.54
TRAF7Q6Q0C0 MSANTD4-206ENST00000617528 508 ntTSL 5 BASIC5.46□□□□□ -1.54
TRAF7Q6Q0C0 BPY2C-204ENST00000618574 321 ntAPPRIS P5 TSL 1 (best) BASIC5.46□□□□□ -1.54
TRAF7Q6Q0C0 PROX1-205ENST00000498508 8498 ntAPPRIS P1 TSL 1 (best) BASIC5.46□□□□□ -1.54
TRAF7Q6Q0C0 MRPL35-202ENST00000337109 3727 ntAPPRIS P4 TSL 1 (best) BASIC5.46□□□□□ -1.54
TRAF7Q6Q0C0 ZNF260-204ENST00000592282 5055 ntAPPRIS P1 TSL 1 (best) BASIC5.46□□□□□ -1.54
TRAF7Q6Q0C0 MMRN1-202ENST00000394980 5217 ntAPPRIS P1 TSL 5 BASIC5.46□□□□□ -1.54
TRAF7Q6Q0C0 WDHD1-201ENST00000360586 5996 ntAPPRIS P1 TSL 1 (best) BASIC5.46□□□□□ -1.54
TRAF7Q6Q0C0 A1CF-207ENST00000395495 9400 ntTSL 5 BASIC5.46□□□□□ -1.54
TRAF7Q6Q0C0 KIAA0408-204ENST00000483725 3284 ntAPPRIS P2 TSL 5 BASIC5.46□□□□□ -1.54
TRAF7Q6Q0C0 ALB-202ENST00000401494 1659 ntTSL 5 BASIC5.46□□□□□ -1.54
TRAF7Q6Q0C0 ANKRD30BP1-201ENST00000451052 2186 ntBASIC5.46□□□□□ -1.54
TRAF7Q6Q0C0 AFTPH-204ENST00000409933 2811 ntAPPRIS ALT1 TSL 1 (best) BASIC5.46□□□□□ -1.54
TRAF7Q6Q0C0 MYO9A-203ENST00000444904 7749 ntAPPRIS P2 TSL 5 BASIC5.46□□□□□ -1.54
TRAF7Q6Q0C0 ZNF644-212ENST00000621077 2056 ntTSL 5 BASIC5.46□□□□□ -1.54
TRAF7Q6Q0C0 ZNF518B-201ENST00000326756 6894 ntAPPRIS P1 TSL 3 BASIC5.46□□□□□ -1.54
TRAF7Q6Q0C0 SYNJ2BP-201ENST00000256366 7015 ntAPPRIS P1 TSL 1 (best) BASIC5.46□□□□□ -1.54
TRAF7Q6Q0C0 RPGRIP1L-201ENST00000262135 8195 ntAPPRIS P3 TSL 5 BASIC5.46□□□□□ -1.54
TRAF7Q6Q0C0 HTR2B-201ENST00000258400 2246 ntAPPRIS P1 TSL 1 (best) BASIC5.46□□□□□ -1.54
TRAF7Q6Q0C0 OR4S2-202ENST00000641692 2211 ntAPPRIS P1 BASIC5.46□□□□□ -1.54
TRAF7Q6Q0C0 CEP295-206ENST00000531700 2890 ntAPPRIS ALT2 TSL 2 BASIC5.45□□□□□ -1.54
TRAF7Q6Q0C0 NCK1-204ENST00000469404 2403 ntTSL 2 BASIC5.45□□□□□ -1.54
Retrieved 100 of 98,524 protein–RNA pairs in 98.7 ms