Protein–RNA interactions for Protein: Q53GD3

SLC44A4, Choline transporter-like protein 4, humanhuman

Predictions only

Length 710 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SLC44A4Q53GD3 AC084198.1-201ENST00000477747 402 ntBASIC3.73□□□□□ -1.81
SLC44A4Q53GD3 MTND5P5-201ENST00000503764 376 ntBASIC3.73□□□□□ -1.81
SLC44A4Q53GD3 PHBP14-201ENST00000512887 367 ntBASIC3.73□□□□□ -1.81
SLC44A4Q53GD3 Y_RNA.665-201ENST00000516177 98 ntBASIC3.73□□□□□ -1.81
SLC44A4Q53GD3 Y_RNA.691-201ENST00000516611 103 ntBASIC3.73□□□□□ -1.81
SLC44A4Q53GD3 RN7SKP256-201ENST00000517201 314 ntBASIC3.73□□□□□ -1.81
SLC44A4Q53GD3 AC091944.1-201ENST00000521984 449 ntTSL 3 BASIC3.73□□□□□ -1.81
SLC44A4Q53GD3 MTND4P7-201ENST00000523876 130 ntBASIC3.73□□□□□ -1.81
SLC44A4Q53GD3 CASP1P1-201ENST00000526345 212 ntBASIC3.73□□□□□ -1.81
SLC44A4Q53GD3 AC087362.1-201ENST00000527912 434 ntTSL 5 BASIC3.73□□□□□ -1.81
SLC44A4Q53GD3 IGKV2OR2-8-201ENST00000558710 300 ntBASIC3.73□□□□□ -1.81
SLC44A4Q53GD3 AC020661.2-201ENST00000560114 134 ntBASIC3.73□□□□□ -1.81
SLC44A4Q53GD3 AC090877.1-201ENST00000561418 344 ntBASIC3.73□□□□□ -1.81
SLC44A4Q53GD3 AL162730.1-201ENST00000605734 292 ntBASIC3.73□□□□□ -1.81
SLC44A4Q53GD3 AC079610.3-201ENST00000606960 147 ntTSL 3 BASIC3.73□□□□□ -1.81
SLC44A4Q53GD3 AL110115.1-201ENST00000614396 364 ntBASIC3.73□□□□□ -1.81
SLC44A4Q53GD3 AC048347.1-201ENST00000624621 427 ntBASIC3.73□□□□□ -1.81
SLC44A4Q53GD3 LINC02086-205ENST00000628749 679 ntTSL 5 BASIC3.73□□□□□ -1.81
SLC44A4Q53GD3 AP000553.6-201ENST00000641242 118 ntBASIC3.73□□□□□ -1.81
SLC44A4Q53GD3 PSG8-202ENST00000401467 1686 ntTSL 5 BASIC3.73□□□□□ -1.81
SLC44A4Q53GD3 RTN4-209ENST00000405240 4061 ntTSL 1 (best) BASIC3.73□□□□□ -1.81
SLC44A4Q53GD3 SEL1L2-202ENST00000378072 1892 ntTSL 2 BASIC3.73□□□□□ -1.81
SLC44A4Q53GD3 DST-204ENST00000361203 22431 ntAPPRIS ALT2 TSL 5 BASIC3.73□□□□□ -1.81
SLC44A4Q53GD3 ZNF736P3Y-201ENST00000428264 1465 ntBASIC3.73□□□□□ -1.81
SLC44A4Q53GD3 AC019117.3-201ENST00000637807 3523 ntAPPRIS P1 TSL 5 BASIC3.73□□□□□ -1.81
SLC44A4Q53GD3 SCOC-203ENST00000394203 1999 ntTSL 2 BASIC3.72□□□□□ -1.81
SLC44A4Q53GD3 KERA-201ENST00000266719 2162 ntAPPRIS P1 TSL 1 (best) BASIC3.72□□□□□ -1.81
SLC44A4Q53GD3 DAZ4-201ENST00000382296 2048 ntAPPRIS P5 TSL 5 BASIC3.72□□□□□ -1.81
SLC44A4Q53GD3 C5orf46-201ENST00000318315 506 ntAPPRIS P2 TSL 1 (best) BASIC3.72□□□□□ -1.81
SLC44A4Q53GD3 RNU6-522P-201ENST00000364497 107 ntBASIC3.72□□□□□ -1.81
SLC44A4Q53GD3 RNU6-715P-201ENST00000365204 103 ntBASIC3.72□□□□□ -1.81
SLC44A4Q53GD3 RNU6-1197P-201ENST00000391183 107 ntBASIC3.72□□□□□ -1.81
SLC44A4Q53GD3 SNORA75.4-201ENST00000391278 119 ntBASIC3.72□□□□□ -1.81
SLC44A4Q53GD3 CCDC126-203ENST00000410069 890 ntAPPRIS P1 TSL 1 (best) BASIC3.72□□□□□ -1.81
SLC44A4Q53GD3 RNU4-26P-201ENST00000410270 107 ntBASIC3.72□□□□□ -1.81
SLC44A4Q53GD3 OFD1P1Y-201ENST00000411756 1225 ntBASIC3.72□□□□□ -1.81
SLC44A4Q53GD3 TRAPPC2P4-201ENST00000421750 331 ntBASIC3.72□□□□□ -1.81
SLC44A4Q53GD3 AC002075.2-201ENST00000425207 252 ntBASIC3.72□□□□□ -1.81
SLC44A4Q53GD3 BRK1P2-201ENST00000442875 223 ntBASIC3.72□□□□□ -1.81
SLC44A4Q53GD3 TRAPPC2P3-201ENST00000443200 321 ntBASIC3.72□□□□□ -1.81
SLC44A4Q53GD3 AL035634.1-201ENST00000446768 372 ntTSL 2 BASIC3.72□□□□□ -1.81
SLC44A4Q53GD3 AC025518.1-201ENST00000479856 347 ntBASIC3.72□□□□□ -1.81
SLC44A4Q53GD3 RPL21P93-201ENST00000480465 489 ntBASIC3.72□□□□□ -1.81
SLC44A4Q53GD3 TRBV12-2-201ENST00000489763 344 ntBASIC3.72□□□□□ -1.81
SLC44A4Q53GD3 AC016556.1-201ENST00000510004 935 ntTSL 2 BASIC3.72□□□□□ -1.81
SLC44A4Q53GD3 SNORA70.18-201ENST00000516696 98 ntBASIC3.72□□□□□ -1.81
SLC44A4Q53GD3 RPL7P20-201ENST00000520308 745 ntBASIC3.72□□□□□ -1.81
SLC44A4Q53GD3 AC093249.1-201ENST00000567049 203 ntBASIC3.72□□□□□ -1.81
SLC44A4Q53GD3 AC012186.2-201ENST00000569353 321 ntTSL 3 BASIC3.72□□□□□ -1.81
SLC44A4Q53GD3 KIAA1524-206ENST00000491772 3877 ntTSL 1 (best) BASIC3.72□□□□□ -1.81
SLC44A4Q53GD3 AL672296.1-201ENST00000427780 2158 ntBASIC3.72□□□□□ -1.81
SLC44A4Q53GD3 GABRG2-213ENST00000639046 3058 ntTSL 5 BASIC3.71□□□□□ -1.82
SLC44A4Q53GD3 CCDC110-202ENST00000393540 2722 ntAPPRIS ALT2 TSL 1 (best) BASIC3.71□□□□□ -1.82
SLC44A4Q53GD3 FIGNL1-203ENST00000419119 3700 ntAPPRIS P1 TSL 1 (best) BASIC3.71□□□□□ -1.82
SLC44A4Q53GD3 Y_RNA.259-201ENST00000364619 101 ntBASIC3.71□□□□□ -1.82
SLC44A4Q53GD3 RNU6-741P-201ENST00000383889 107 ntBASIC3.71□□□□□ -1.82
SLC44A4Q53GD3 Y_RNA.387-201ENST00000383918 102 ntBASIC3.71□□□□□ -1.82
SLC44A4Q53GD3 TRAV26-1-201ENST00000390455 537 ntAPPRIS P1 BASIC3.71□□□□□ -1.82
SLC44A4Q53GD3 U3.19-201ENST00000390893 196 ntBASIC3.71□□□□□ -1.82
SLC44A4Q53GD3 Y_RNA.579-201ENST00000390939 94 ntBASIC3.71□□□□□ -1.82
SLC44A4Q53GD3 SNORD70.1-201ENST00000391007 85 ntBASIC3.71□□□□□ -1.82
SLC44A4Q53GD3 MTHFD2P2-201ENST00000407725 247 ntBASIC3.71□□□□□ -1.82
SLC44A4Q53GD3 HSPE1P1-201ENST00000421494 318 ntBASIC3.71□□□□□ -1.82
SLC44A4Q53GD3 AL590383.1-201ENST00000428602 75 ntBASIC3.71□□□□□ -1.82
SLC44A4Q53GD3 AC079799.1-201ENST00000430696 331 ntTSL 3 BASIC3.71□□□□□ -1.82
SLC44A4Q53GD3 AC236972.2-201ENST00000434979 310 ntBASIC3.71□□□□□ -1.82
SLC44A4Q53GD3 HMGB1P12-201ENST00000438594 598 ntBASIC3.71□□□□□ -1.82
SLC44A4Q53GD3 HMGB3P11-201ENST00000440127 604 ntBASIC3.71□□□□□ -1.82
SLC44A4Q53GD3 SNORD19B-201ENST00000459623 84 ntBASIC3.71□□□□□ -1.82
SLC44A4Q53GD3 RPL37P6-201ENST00000460682 294 ntBASIC3.71□□□□□ -1.82
SLC44A4Q53GD3 RPL21P104-201ENST00000464143 478 ntBASIC3.71□□□□□ -1.82
SLC44A4Q53GD3 RPS23P3-201ENST00000470993 430 ntBASIC3.71□□□□□ -1.82
SLC44A4Q53GD3 AP002884.2-201ENST00000471647 395 ntBASIC3.71□□□□□ -1.82
SLC44A4Q53GD3 AC121764.1-201ENST00000472238 563 ntTSL 4 BASIC3.71□□□□□ -1.82
SLC44A4Q53GD3 RNU4ATAC15P-201ENST00000516415 126 ntBASIC3.71□□□□□ -1.82
SLC44A4Q53GD3 RNA5SP290-201ENST00000517133 127 ntBASIC3.71□□□□□ -1.82
SLC44A4Q53GD3 AP002892.1-201ENST00000537727 550 ntTSL 4 BASIC3.71□□□□□ -1.82
SLC44A4Q53GD3 AC008011.1-201ENST00000545989 227 ntBASIC3.71□□□□□ -1.82
SLC44A4Q53GD3 AC020661.3-201ENST00000558101 414 ntTSL 3 BASIC3.71□□□□□ -1.82
SLC44A4Q53GD3 AC092807.2-201ENST00000609367 243 ntBASIC3.71□□□□□ -1.82
SLC44A4Q53GD3 AL133215.3-201ENST00000609801 448 ntBASIC3.71□□□□□ -1.82
SLC44A4Q53GD3 FOXP2-227ENST00000638397 240 ntTSL 5 BASIC3.71□□□□□ -1.82
SLC44A4Q53GD3 LINC00907-209ENST00000593234 3376 ntTSL 1 (best) BASIC3.71□□□□□ -1.82
SLC44A4Q53GD3 AC007785.2-201ENST00000598627 1916 ntBASIC3.71□□□□□ -1.82
SLC44A4Q53GD3 AC103993.1-201ENST00000521500 1584 ntTSL 5 BASIC3.71□□□□□ -1.82
SLC44A4Q53GD3 PKN2-AS1-202ENST00000458097 3542 ntTSL 2 BASIC3.71□□□□□ -1.82
SLC44A4Q53GD3 SPZ1-201ENST00000296739 1868 ntAPPRIS P2 BASIC3.71□□□□□ -1.82
SLC44A4Q53GD3 RBM39-201ENST00000253363 2488 ntAPPRIS P4 TSL 1 (best) BASIC3.7□□□□□ -1.82
SLC44A4Q53GD3 LINC00836-202ENST00000626230 1640 ntTSL 2 BASIC3.7□□□□□ -1.82
SLC44A4Q53GD3 GPRC6A-201ENST00000310357 2860 ntAPPRIS P1 TSL 1 (best) BASIC3.7□□□□□ -1.82
SLC44A4Q53GD3 CD36-221ENST00000534394 1741 ntTSL 2 BASIC3.7□□□□□ -1.82
SLC44A4Q53GD3 CYLC2-204ENST00000612124 1817 ntAPPRIS P1 TSL 1 (best) BASIC3.7□□□□□ -1.82
SLC44A4Q53GD3 RNF17-204ENST00000339524 2203 ntTSL 2 BASIC3.7□□□□□ -1.82
SLC44A4Q53GD3 OR10A7-201ENST00000326258 951 ntAPPRIS P1 BASIC3.7□□□□□ -1.82
SLC44A4Q53GD3 DEFB107A-201ENST00000335021 389 ntAPPRIS P1 TSL 1 (best) BASIC3.7□□□□□ -1.82
SLC44A4Q53GD3 DEFB107B-201ENST00000355602 389 ntAPPRIS P1 TSL 1 (best) BASIC3.7□□□□□ -1.82
SLC44A4Q53GD3 RNU4-35P-201ENST00000362588 141 ntBASIC3.7□□□□□ -1.82
SLC44A4Q53GD3 Y_RNA.216-201ENST00000364205 93 ntBASIC3.7□□□□□ -1.82
SLC44A4Q53GD3 Y_RNA.245-201ENST00000364493 95 ntBASIC3.7□□□□□ -1.82
SLC44A4Q53GD3 LINC00587-201ENST00000374801 590 ntTSL 1 (best) BASIC3.7□□□□□ -1.82
Retrieved 100 of 98,524 protein–RNA pairs in 133.4 ms