Protein–RNA interactions for Protein: Q33E94

RFX4, Transcription factor RFX4, humanhuman

Predictions only

Length 735 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RFX4Q33E94 RNU6-1092P-201ENST00000516955 87 ntBASIC2.06□□□□□ -2.08
RFX4Q33E94 SCARNA11.3-201ENST00000517276 130 ntBASIC2.06□□□□□ -2.08
RFX4Q33E94 AC008662.2-201ENST00000522426 389 ntTSL 5 BASIC2.06□□□□□ -2.08
RFX4Q33E94 AC007368.1-201ENST00000536422 974 ntTSL 5 BASIC2.06□□□□□ -2.08
RFX4Q33E94 LINC02165-201ENST00000563061 443 ntTSL 3 BASIC2.06□□□□□ -2.08
RFX4Q33E94 AC234778.2-201ENST00000566241 354 ntBASIC2.06□□□□□ -2.08
RFX4Q33E94 AC106782.4-201ENST00000568264 210 ntBASIC2.06□□□□□ -2.08
RFX4Q33E94 SNORD14A-201ENST00000606526 91 ntBASIC2.06□□□□□ -2.08
RFX4Q33E94 RNU6-87P-201ENST00000607561 108 ntBASIC2.06□□□□□ -2.08
RFX4Q33E94 AC107294.1-201ENST00000609524 467 ntBASIC2.06□□□□□ -2.08
RFX4Q33E94 AC023490.3-201ENST00000621762 358 ntTSL 3 BASIC2.06□□□□□ -2.08
RFX4Q33E94 AC007998.5-201ENST00000622938 237 ntBASIC2.06□□□□□ -2.08
RFX4Q33E94 AC012640.5-201ENST00000623897 319 ntBASIC2.06□□□□□ -2.08
RFX4Q33E94 GYPB-216ENST00000638448 363 ntAPPRIS P1 TSL 1 (best) BASIC2.06□□□□□ -2.08
RFX4Q33E94 AP000550.4-201ENST00000639507 358 ntTSL 3 BASIC2.06□□□□□ -2.08
RFX4Q33E94 ANKRD20A17P-201ENST00000511745 1330 ntBASIC2.06□□□□□ -2.08
RFX4Q33E94 VIM-AS1-201ENST00000437232 1351 ntTSL 2 BASIC2.06□□□□□ -2.08
RFX4Q33E94 CHORDC1-205ENST00000529726 4805 ntTSL 2 BASIC2.06□□□□□ -2.08
RFX4Q33E94 ECT2-211ENST00000441497 2825 ntAPPRIS P2 TSL 1 (best) BASIC2.06□□□□□ -2.08
RFX4Q33E94 SLC39A10-201ENST00000359634 5322 ntAPPRIS P1 TSL 1 (best) BASIC2.06□□□□□ -2.08
RFX4Q33E94 ZNF658B-202ENST00000615961 3375 ntBASIC2.06□□□□□ -2.08
RFX4Q33E94 AC110491.1-201ENST00000562191 2010 ntBASIC2.05□□□□□ -2.08
RFX4Q33E94 OR8K3-203ENST00000641662 2438 ntAPPRIS P1 BASIC2.05□□□□□ -2.08
RFX4Q33E94 RNU4-21P-201ENST00000362802 126 ntBASIC2.05□□□□□ -2.08
RFX4Q33E94 RNU6-39P-201ENST00000384344 107 ntBASIC2.05□□□□□ -2.08
RFX4Q33E94 Y_RNA.534-201ENST00000384599 112 ntBASIC2.05□□□□□ -2.08
RFX4Q33E94 MIR23A-201ENST00000385245 73 ntBASIC2.05□□□□□ -2.08
RFX4Q33E94 RNU6-750P-201ENST00000390946 107 ntBASIC2.05□□□□□ -2.08
RFX4Q33E94 RNU6-817P-201ENST00000391083 104 ntBASIC2.05□□□□□ -2.08
RFX4Q33E94 RNU6-1328P-201ENST00000410938 106 ntBASIC2.05□□□□□ -2.08
RFX4Q33E94 RPS12P24-201ENST00000412619 387 ntBASIC2.05□□□□□ -2.08
RFX4Q33E94 ABCC5-AS1-201ENST00000422946 469 ntTSL 2 BASIC2.05□□□□□ -2.08
RFX4Q33E94 HMGN2P38-201ENST00000423806 265 ntBASIC2.05□□□□□ -2.08
RFX4Q33E94 AC092447.3-201ENST00000426027 686 ntBASIC2.05□□□□□ -2.08
RFX4Q33E94 HMGB1P27-201ENST00000431429 603 ntBASIC2.05□□□□□ -2.08
RFX4Q33E94 AC078845.1-202ENST00000435996 733 ntTSL 3 BASIC2.05□□□□□ -2.08
RFX4Q33E94 AC018634.1-201ENST00000437554 401 ntBASIC2.05□□□□□ -2.08
RFX4Q33E94 MTND1P30-201ENST00000441241 901 ntBASIC2.05□□□□□ -2.08
RFX4Q33E94 RPL39P36-201ENST00000490784 156 ntBASIC2.05□□□□□ -2.08
RFX4Q33E94 AC092666.1-201ENST00000492054 573 ntTSL 4 BASIC2.05□□□□□ -2.08
RFX4Q33E94 AP002075.1-201ENST00000505091 603 ntTSL 3 BASIC2.05□□□□□ -2.08
RFX4Q33E94 AC010587.1-201ENST00000505809 469 ntBASIC2.05□□□□□ -2.08
RFX4Q33E94 LYRM7-202ENST00000507584 317 ntTSL 2 BASIC2.05□□□□□ -2.08
RFX4Q33E94 LINC02100-201ENST00000512978 238 ntTSL 3 BASIC2.05□□□□□ -2.08
RFX4Q33E94 BTF3P12-201ENST00000519620 469 ntBASIC2.05□□□□□ -2.08
RFX4Q33E94 SNHG6-202ENST00000520619 479 ntTSL 3 BASIC2.05□□□□□ -2.08
RFX4Q33E94 AC025755.1-201ENST00000521306 278 ntBASIC2.05□□□□□ -2.08
RFX4Q33E94 AC060788.1-201ENST00000521318 469 ntBASIC2.05□□□□□ -2.08
RFX4Q33E94 AC022878.1-201ENST00000530684 149 ntBASIC2.05□□□□□ -2.08
RFX4Q33E94 RPS3AP23-202ENST00000574601 686 ntBASIC2.05□□□□□ -2.08
RFX4Q33E94 AC073544.2-201ENST00000601155 540 ntBASIC2.05□□□□□ -2.08
RFX4Q33E94 AL670379.6-201ENST00000603753 252 ntBASIC2.05□□□□□ -2.08
RFX4Q33E94 AL670379.11-201ENST00000604059 253 ntBASIC2.05□□□□□ -2.08
RFX4Q33E94 AC008162.1-201ENST00000604718 254 ntBASIC2.05□□□□□ -2.08
RFX4Q33E94 AL670379.1-201ENST00000604752 252 ntBASIC2.05□□□□□ -2.08
RFX4Q33E94 AL670379.5-201ENST00000605253 252 ntBASIC2.05□□□□□ -2.08
RFX4Q33E94 AL670379.12-201ENST00000605291 253 ntBASIC2.05□□□□□ -2.08
RFX4Q33E94 AL670379.8-201ENST00000605353 252 ntBASIC2.05□□□□□ -2.08
RFX4Q33E94 AL670379.7-201ENST00000605823 252 ntBASIC2.05□□□□□ -2.08
RFX4Q33E94 AL451064.1-201ENST00000607718 471 ntBASIC2.05□□□□□ -2.08
RFX4Q33E94 AL160408.5-201ENST00000607759 526 ntTSL 4 BASIC2.05□□□□□ -2.08
RFX4Q33E94 AC097717.1-249ENST00000608040 401 ntTSL 5 BASIC2.05□□□□□ -2.08
RFX4Q33E94 AC091304.9-201ENST00000612091 226 ntBASIC2.05□□□□□ -2.08
RFX4Q33E94 AL365204.3-201ENST00000612448 685 ntBASIC2.05□□□□□ -2.08
RFX4Q33E94 AC130324.3-201ENST00000614165 542 ntBASIC2.05□□□□□ -2.08
RFX4Q33E94 SATB1-AS1-227ENST00000625533 743 ntTSL 5 BASIC2.05□□□□□ -2.08
RFX4Q33E94 MTND5P42-201ENST00000637720 498 ntBASIC2.05□□□□□ -2.08
RFX4Q33E94 PLCZ1-209ENST00000539875 1398 ntTSL 1 (best) BASIC2.05□□□□□ -2.08
RFX4Q33E94 MTND4P35-201ENST00000604257 1375 ntBASIC2.05□□□□□ -2.08
RFX4Q33E94 THOC2-216ENST00000491737 4452 ntTSL 5 BASIC2.05□□□□□ -2.08
RFX4Q33E94 IL2-201ENST00000226730 1029 ntAPPRIS P1 TSL 1 (best) BASIC2.04□□□□□ -2.08
RFX4Q33E94 RNA5SP138-201ENST00000365098 114 ntBASIC2.04□□□□□ -2.08
RFX4Q33E94 MAPK8-202ENST00000374174 739 ntTSL 3 BASIC2.04□□□□□ -2.08
RFX4Q33E94 C6orf62-201ENST00000378102 741 ntTSL 5 BASIC2.04□□□□□ -2.08
RFX4Q33E94 RNU6-946P-201ENST00000383878 107 ntBASIC2.04□□□□□ -2.08
RFX4Q33E94 RPL26P27-201ENST00000414397 437 ntBASIC2.04□□□□□ -2.08
RFX4Q33E94 SPATA17-AS1-201ENST00000415765 420 ntTSL 5 BASIC2.04□□□□□ -2.08
RFX4Q33E94 CYCSP46-201ENST00000423569 204 ntBASIC2.04□□□□□ -2.08
RFX4Q33E94 AL353729.1-201ENST00000425044 720 ntBASIC2.04□□□□□ -2.08
RFX4Q33E94 MTND4P4-201ENST00000439033 1366 ntBASIC2.04□□□□□ -2.08
RFX4Q33E94 AC098831.1-201ENST00000440661 216 ntBASIC2.04□□□□□ -2.08
RFX4Q33E94 MTND4P25-201ENST00000441039 533 ntBASIC2.04□□□□□ -2.08
RFX4Q33E94 AL158210.1-201ENST00000448835 500 ntTSL 3 BASIC2.04□□□□□ -2.08
RFX4Q33E94 AL021397.1-201ENST00000451806 248 ntBASIC2.04□□□□□ -2.08
RFX4Q33E94 AL355997.1-202ENST00000454361 610 ntTSL 3 BASIC2.04□□□□□ -2.08
RFX4Q33E94 LINC01038-201ENST00000457858 428 ntTSL 3 BASIC2.04□□□□□ -2.08
RFX4Q33E94 AC090515.1-201ENST00000465295 476 ntBASIC2.04□□□□□ -2.08
RFX4Q33E94 AL049873.1-201ENST00000480540 376 ntBASIC2.04□□□□□ -2.08
RFX4Q33E94 AC108935.1-201ENST00000504874 518 ntTSL 2 BASIC2.04□□□□□ -2.08
RFX4Q33E94 LINC02501-201ENST00000510420 426 ntTSL 2 BASIC2.04□□□□□ -2.08
RFX4Q33E94 RNU6-1220P-201ENST00000517126 108 ntBASIC2.04□□□□□ -2.08
RFX4Q33E94 AC009902.1-201ENST00000519351 183 ntBASIC2.04□□□□□ -2.08
RFX4Q33E94 AP003498.1-201ENST00000532530 347 ntTSL 3 BASIC2.04□□□□□ -2.08
RFX4Q33E94 VBP1-203ENST00000535916 944 ntTSL 2 BASIC2.04□□□□□ -2.08
RFX4Q33E94 ACTR6-212ENST00000552376 1659 ntTSL 5 BASIC2.04□□□□□ -2.08
RFX4Q33E94 RPL21P5-201ENST00000554662 472 ntBASIC2.04□□□□□ -2.08
RFX4Q33E94 PCLAF-207ENST00000559519 749 ntTSL 2 BASIC2.04□□□□□ -2.08
RFX4Q33E94 AC027176.1-201ENST00000560204 514 ntBASIC2.04□□□□□ -2.08
RFX4Q33E94 AC091043.1-201ENST00000579830 453 ntTSL 3 BASIC2.04□□□□□ -2.08
RFX4Q33E94 AC009977.1-201ENST00000586015 570 ntBASIC2.04□□□□□ -2.08
Retrieved 100 of 98,524 protein–RNA pairs in 128.2 ms