Protein–RNA interactions for Protein: P53384

NUBP1, Cytosolic Fe-S cluster assembly factor NUBP1, humanhuman

Predictions only

Length 320 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NUBP1P53384 AL929601.2-201ENST00000549951 381 ntTSL 4 BASIC5.81□□□□□ -1.48
NUBP1P53384 AL031600.2-201ENST00000563223 307 ntTSL 5 BASIC5.81□□□□□ -1.48
NUBP1P53384 MIR4662B-201ENST00000579498 81 ntBASIC5.81□□□□□ -1.48
NUBP1P53384 MIR4420-201ENST00000583944 77 ntBASIC5.81□□□□□ -1.48
NUBP1P53384 AC093732.2-201ENST00000607950 274 ntBASIC5.81□□□□□ -1.48
NUBP1P53384 AP000346.3-201ENST00000622821 210 ntBASIC5.81□□□□□ -1.48
NUBP1P53384 AC112200.1-201ENST00000625015 234 ntBASIC5.81□□□□□ -1.48
NUBP1P53384 AGTR2-201ENST00000371906 2882 ntAPPRIS P1 TSL 1 (best) BASIC5.81□□□□□ -1.48
NUBP1P53384 MEF2C-202ENST00000424173 6336 ntAPPRIS P3 TSL 1 (best) BASIC5.81□□□□□ -1.48
NUBP1P53384 PUS7L-207ENST00000551923 3313 ntAPPRIS P1 TSL 1 (best) BASIC5.81□□□□□ -1.48
NUBP1P53384 TRPC4-202ENST00000355779 2784 ntTSL 1 (best) BASIC5.81□□□□□ -1.48
NUBP1P53384 UGGT1-201ENST00000259253 10650 ntAPPRIS P1 TSL 1 (best) BASIC5.81□□□□□ -1.48
NUBP1P53384 FAM205A-201ENST00000378788 4225 ntAPPRIS P1 TSL 2 BASIC5.81□□□□□ -1.48
NUBP1P53384 LYVE1-201ENST00000256178 3273 ntAPPRIS P1 TSL 1 (best) BASIC5.8□□□□□ -1.48
NUBP1P53384 ZNF320-205ENST00000595635 6448 ntAPPRIS P1 TSL 2 BASIC5.8□□□□□ -1.48
NUBP1P53384 XIAP-205ENST00000434753 8415 ntAPPRIS P1 TSL 1 (best) BASIC5.8□□□□□ -1.48
NUBP1P53384 USP46-201ENST00000441222 7954 ntAPPRIS P1 TSL 1 (best) BASIC5.8□□□□□ -1.48
NUBP1P53384 SYTL2-217ENST00000528231 3536 ntAPPRIS ALT1 TSL 1 (best) BASIC5.8□□□□□ -1.48
NUBP1P53384 TBC1D23-202ENST00000394144 3677 ntTSL 1 (best) BASIC5.8□□□□□ -1.48
NUBP1P53384 RNU6-600P-201ENST00000362524 99 ntBASIC5.8□□□□□ -1.48
NUBP1P53384 SNORA63.5-201ENST00000363548 123 ntBASIC5.8□□□□□ -1.48
NUBP1P53384 RNA5SP223-201ENST00000365174 120 ntBASIC5.8□□□□□ -1.48
NUBP1P53384 RNU6-748P-201ENST00000384648 107 ntBASIC5.8□□□□□ -1.48
NUBP1P53384 IGLV7-43-201ENST00000390298 385 ntAPPRIS P1 BASIC5.8□□□□□ -1.48
NUBP1P53384 RPS16P5-201ENST00000406501 404 ntBASIC5.8□□□□□ -1.48
NUBP1P53384 AC093162.1-201ENST00000419682 124 ntBASIC5.8□□□□□ -1.48
NUBP1P53384 CALM2P4-201ENST00000430810 426 ntBASIC5.8□□□□□ -1.48
NUBP1P53384 RN7SL738P-201ENST00000470264 297 ntBASIC5.8□□□□□ -1.48
NUBP1P53384 AL035690.1-201ENST00000490892 383 ntBASIC5.8□□□□□ -1.48
NUBP1P53384 RNU6ATAC24P-201ENST00000516811 135 ntBASIC5.8□□□□□ -1.48
NUBP1P53384 AL160262.1-201ENST00000522264 254 ntTSL 3 BASIC5.8□□□□□ -1.48
NUBP1P53384 AC103855.1-201ENST00000525926 564 ntTSL 2 BASIC5.8□□□□□ -1.48
NUBP1P53384 AC011602.1-201ENST00000546484 331 ntBASIC5.8□□□□□ -1.48
NUBP1P53384 MRPS21P7-201ENST00000566937 238 ntBASIC5.8□□□□□ -1.48
NUBP1P53384 AL365205.2-201ENST00000594586 68 ntBASIC5.8□□□□□ -1.48
NUBP1P53384 AL355512.1-202ENST00000607952 209 ntTSL 5 BASIC5.8□□□□□ -1.48
NUBP1P53384 Metazoa_SRP.43-201ENST00000616394 271 ntBASIC5.8□□□□□ -1.48
NUBP1P53384 LY86-AS1-202ENST00000435641 2819 ntTSL 2 BASIC5.8□□□□□ -1.48
NUBP1P53384 SBNO1-202ENST00000420886 10981 ntAPPRIS ALT1 TSL 1 (best) BASIC5.8□□□□□ -1.48
NUBP1P53384 ZNF418-212ENST00000616958 2212 ntAPPRIS P3 TSL 1 (best) BASIC5.8□□□□□ -1.48
NUBP1P53384 MECOM-209ENST00000472280 3593 ntTSL 5 BASIC5.8□□□□□ -1.48
NUBP1P53384 TMEM200A-202ENST00000392429 5017 ntAPPRIS P1 TSL 1 (best) BASIC5.8□□□□□ -1.48
NUBP1P53384 SEC31A-237ENST00000513858 3687 ntTSL 1 (best) BASIC5.8□□□□□ -1.48
NUBP1P53384 PPP2R5E-202ENST00000422769 3478 ntTSL 2 BASIC5.8□□□□□ -1.48
NUBP1P53384 C2CD5-203ENST00000446597 3490 ntTSL 1 (best) BASIC5.8□□□□□ -1.48
NUBP1P53384 SPRY3-201ENST00000302805 9019 ntAPPRIS P1 TSL 1 (best) BASIC5.8□□□□□ -1.48
NUBP1P53384 AC026241.1-201ENST00000517873 2142 ntBASIC5.8□□□□□ -1.48
NUBP1P53384 TMPRSS11A-202ENST00000508048 3247 ntAPPRIS ALT2 TSL 1 (best) BASIC5.8□□□□□ -1.48
NUBP1P53384 DTNA-207ENST00000444659 6343 ntAPPRIS ALT2 TSL 5 BASIC5.8□□□□□ -1.48
NUBP1P53384 TCEANC-201ENST00000380600 2988 ntAPPRIS P1 TSL 3 BASIC5.79□□□□□ -1.48
NUBP1P53384 DUSP19-202ENST00000354221 5176 ntAPPRIS P1 TSL 1 (best) BASIC5.79□□□□□ -1.48
NUBP1P53384 IFIT1-202ENST00000546318 4613 ntTSL 3 BASIC5.79□□□□□ -1.48
NUBP1P53384 ZBTB8B-201ENST00000609129 12834 ntAPPRIS P1 TSL 5 BASIC5.79□□□□□ -1.48
NUBP1P53384 EMSY-206ENST00000525038 4376 ntTSL 1 (best) BASIC5.79□□□□□ -1.48
NUBP1P53384 AL356292.1-201ENST00000283110 373 ntBASIC5.79□□□□□ -1.48
NUBP1P53384 SNORA73.1-201ENST00000363107 205 ntBASIC5.79□□□□□ -1.48
NUBP1P53384 UBBP2-201ENST00000376781 231 ntBASIC5.79□□□□□ -1.48
NUBP1P53384 B3GALT5-203ENST00000380620 13170 ntAPPRIS P1 TSL 1 (best) BASIC5.79□□□□□ -1.48
NUBP1P53384 RNU1-106P-201ENST00000384382 164 ntBASIC5.79□□□□□ -1.48
NUBP1P53384 AC007064.1-201ENST00000412238 351 ntBASIC5.79□□□□□ -1.48
NUBP1P53384 AC108075.1-201ENST00000424692 529 ntBASIC5.79□□□□□ -1.48
NUBP1P53384 AL021153.1-201ENST00000427360 308 ntTSL 3 BASIC5.79□□□□□ -1.48
NUBP1P53384 H3F3BP1-201ENST00000440551 403 ntBASIC5.79□□□□□ -1.48
NUBP1P53384 AC073218.1-201ENST00000458413 171 ntTSL 5 BASIC5.79□□□□□ -1.48
NUBP1P53384 AC068522.1-201ENST00000482895 345 ntBASIC5.79□□□□□ -1.48
NUBP1P53384 AC010598.1-201ENST00000510378 103 ntBASIC5.79□□□□□ -1.48
NUBP1P53384 RNU4ATAC17P-201ENST00000517272 120 ntBASIC5.79□□□□□ -1.48
NUBP1P53384 AC013762.1-201ENST00000531136 467 ntTSL 3 BASIC5.79□□□□□ -1.48
NUBP1P53384 TOMM20P2-201ENST00000540082 421 ntBASIC5.79□□□□□ -1.48
NUBP1P53384 PINLYP-205ENST00000569031 557 ntTSL 2 BASIC5.79□□□□□ -1.48
NUBP1P53384 AC243829.5-201ENST00000578447 247 ntTSL 5 BASIC5.79□□□□□ -1.48
NUBP1P53384 Y_RNA.818-201ENST00000618813 71 ntBASIC5.79□□□□□ -1.48
NUBP1P53384 Six3os1_7.1-201ENST00000621512 201 ntBASIC5.79□□□□□ -1.48
NUBP1P53384 AC091953.3-201ENST00000623220 236 ntBASIC5.79□□□□□ -1.48
NUBP1P53384 CCNYL2-203ENST00000638057 730 ntTSL 3 BASIC5.79□□□□□ -1.48
NUBP1P53384 WASHC4-202ENST00000332180 5812 ntAPPRIS P3 TSL 1 (best) BASIC5.79□□□□□ -1.48
NUBP1P53384 ST6GALNAC3-201ENST00000328299 6861 ntAPPRIS P1 TSL 1 (best) BASIC5.79□□□□□ -1.48
NUBP1P53384 ZBTB38-202ENST00000441582 3662 ntAPPRIS P1 TSL 2 BASIC5.79□□□□□ -1.48
NUBP1P53384 AC005162.3-201ENST00000609389 3695 ntTSL 5 BASIC5.79□□□□□ -1.48
NUBP1P53384 AL133284.1-201ENST00000423715 4996 ntTSL 1 (best) BASIC5.79□□□□□ -1.48
NUBP1P53384 AC058791.1-201ENST00000608412 3198 ntBASIC5.79□□□□□ -1.48
NUBP1P53384 ZCCHC6-206ENST00000375963 5379 ntAPPRIS P1 TSL 5 BASIC5.79□□□□□ -1.48
NUBP1P53384 LINC02421-201ENST00000542219 3135 ntTSL 1 (best) BASIC5.79□□□□□ -1.48
NUBP1P53384 FGF1-216ENST00000621536 4062 ntAPPRIS P1 TSL 1 (best) BASIC5.79□□□□□ -1.48
NUBP1P53384 NCOR1-205ENST00000395857 9501 ntTSL 5 BASIC5.78□□□□□ -1.48
NUBP1P53384 R3HCC1L-201ENST00000298999 3379 ntAPPRIS P1 TSL 5 BASIC5.78□□□□□ -1.48
NUBP1P53384 RASGRP1-203ENST00000450598 2296 ntTSL 1 (best) BASIC5.78□□□□□ -1.48
NUBP1P53384 FAP-203ENST00000443424 2598 ntTSL 2 BASIC5.78□□□□□ -1.48
NUBP1P53384 CCDC129-211ENST00000615280 4142 ntAPPRIS ALT2 TSL 2 BASIC5.78□□□□□ -1.48
NUBP1P53384 AASDH-203ENST00000502617 3004 ntTSL 1 (best) BASIC5.78□□□□□ -1.48
NUBP1P53384 TOR1AIP2-201ENST00000367612 7905 ntAPPRIS P1 TSL 1 (best) BASIC5.78□□□□□ -1.48
NUBP1P53384 SLC12A6-218ENST00000560611 4239 ntAPPRIS ALT1 TSL 1 (best) BASIC5.78□□□□□ -1.48
NUBP1P53384 NEGR1-202ENST00000357731 12811 ntAPPRIS P1 TSL 1 (best) BASIC5.78□□□□□ -1.48
NUBP1P53384 Y_RNA.40-201ENST00000362645 93 ntBASIC5.78□□□□□ -1.48
NUBP1P53384 Y_RNA.111-201ENST00000363248 100 ntBASIC5.78□□□□□ -1.48
NUBP1P53384 SNORA62-201ENST00000365493 153 ntBASIC5.78□□□□□ -1.48
NUBP1P53384 RNA5SP211-201ENST00000365516 117 ntBASIC5.78□□□□□ -1.48
NUBP1P53384 MIR23A-201ENST00000385245 73 ntBASIC5.78□□□□□ -1.48
NUBP1P53384 SPATA13-AS1-201ENST00000430733 433 ntTSL 3 BASIC5.78□□□□□ -1.48
NUBP1P53384 AL513185.1-201ENST00000431638 162 ntTSL 5 BASIC5.78□□□□□ -1.48
Retrieved 100 of 98,524 protein–RNA pairs in 103.8 ms