Protein–RNA interactions for Protein: P31415

CASQ1, Calsequestrin-1, humanhuman

Predictions only

Length 396 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CASQ1P31415 MIR7974-201ENST00000615835 79 ntBASIC1.68□□□□□ -2.14
CASQ1P31415 AC091304.6-201ENST00000619761 202 ntBASIC1.68□□□□□ -2.14
CASQ1P31415 AC093875.1-201ENST00000623688 504 ntBASIC1.68□□□□□ -2.14
CASQ1P31415 AC231657.1-201ENST00000624313 397 ntBASIC1.68□□□□□ -2.14
CASQ1P31415 ZNF876P-202ENST00000398732 1485 ntBASIC1.68□□□□□ -2.14
CASQ1P31415 CUL3-203ENST00000409096 2701 ntTSL 1 (best) BASIC1.68□□□□□ -2.14
CASQ1P31415 DLEU2_6.3-201ENST00000340052 136 ntBASIC1.67□□□□□ -2.14
CASQ1P31415 Y_RNA.67-201ENST00000362870 100 ntBASIC1.67□□□□□ -2.14
CASQ1P31415 RNU6-609P-201ENST00000365459 107 ntBASIC1.67□□□□□ -2.14
CASQ1P31415 RNU6-611P-201ENST00000384276 104 ntBASIC1.67□□□□□ -2.14
CASQ1P31415 RN7SKP284-201ENST00000411002 343 ntBASIC1.67□□□□□ -2.14
CASQ1P31415 SDAD1P3-201ENST00000427380 333 ntBASIC1.67□□□□□ -2.14
CASQ1P31415 UBE2E2-AS1-202ENST00000430018 499 ntTSL 2 BASIC1.67□□□□□ -2.14
CASQ1P31415 MTND5P14-201ENST00000441481 1267 ntBASIC1.67□□□□□ -2.14
CASQ1P31415 MTND1P31-201ENST00000449206 961 ntBASIC1.67□□□□□ -2.14
CASQ1P31415 AL359915.2-203ENST00000457043 540 ntTSL 3 BASIC1.67□□□□□ -2.14
CASQ1P31415 PGRMC2-204ENST00000503872 1028 ntTSL 3 BASIC1.67□□□□□ -2.14
CASQ1P31415 LINC02384-205ENST00000539404 785 ntTSL 3 BASIC1.67□□□□□ -2.14
CASQ1P31415 AL160236.1-201ENST00000556317 195 ntBASIC1.67□□□□□ -2.14
CASQ1P31415 VN1R87P-201ENST00000596706 487 ntBASIC1.67□□□□□ -2.14
CASQ1P31415 AC069545.1-201ENST00000605671 358 ntBASIC1.67□□□□□ -2.14
CASQ1P31415 AC087241.4-201ENST00000612441 480 ntBASIC1.67□□□□□ -2.14
CASQ1P31415 DLEU2_6.2-201ENST00000620994 136 ntBASIC1.67□□□□□ -2.14
CASQ1P31415 AC084768.2-201ENST00000622736 221 ntBASIC1.67□□□□□ -2.14
CASQ1P31415 AL356094.1-201ENST00000624663 1212 ntBASIC1.67□□□□□ -2.14
CASQ1P31415 HPVC1-201ENST00000629899 1198 ntBASIC1.67□□□□□ -2.14
CASQ1P31415 TEX21P-201ENST00000447107 1476 ntBASIC1.67□□□□□ -2.14
CASQ1P31415 ATP11C-202ENST00000361648 6010 ntAPPRIS ALT2 TSL 1 (best) BASIC1.67□□□□□ -2.14
CASQ1P31415 MDM2-206ENST00000350057 1401 ntTSL 1 (best) BASIC1.66□□□□□ -2.14
CASQ1P31415 SNORD114-19-201ENST00000363072 75 ntBASIC1.66□□□□□ -2.14
CASQ1P31415 MIR597-201ENST00000384968 97 ntBASIC1.66□□□□□ -2.14
CASQ1P31415 TRAV34-201ENST00000390461 349 ntAPPRIS P1 BASIC1.66□□□□□ -2.14
CASQ1P31415 BTF3L4P2-201ENST00000392798 346 ntBASIC1.66□□□□□ -2.14
CASQ1P31415 MIR1262-201ENST00000408276 93 ntBASIC1.66□□□□□ -2.14
CASQ1P31415 AP001043.2-201ENST00000434589 288 ntTSL 3 BASIC1.66□□□□□ -2.14
CASQ1P31415 AL354941.1-201ENST00000438600 464 ntBASIC1.66□□□□□ -2.14
CASQ1P31415 RPL7P43-201ENST00000478876 753 ntBASIC1.66□□□□□ -2.14
CASQ1P31415 HYDIN2-201ENST00000493714 554 ntTSL 4 BASIC1.66□□□□□ -2.14
CASQ1P31415 AC069439.2-201ENST00000496403 789 ntTSL 2 BASIC1.66□□□□□ -2.14
CASQ1P31415 RPL23AP63-201ENST00000498752 471 ntBASIC1.66□□□□□ -2.14
CASQ1P31415 CCNG1-203ENST00000504553 732 ntTSL 3 BASIC1.66□□□□□ -2.14
CASQ1P31415 RNU6ATAC12P-201ENST00000516542 115 ntBASIC1.66□□□□□ -2.14
CASQ1P31415 LINC02267-202ENST00000522173 799 ntTSL 3 BASIC1.66□□□□□ -2.14
CASQ1P31415 AP004607.1-201ENST00000524456 203 ntBASIC1.66□□□□□ -2.14
CASQ1P31415 AC005832.3-201ENST00000537929 631 ntBASIC1.66□□□□□ -2.14
CASQ1P31415 POC1B-211ENST00000549504 581 ntTSL 5 BASIC1.66□□□□□ -2.14
CASQ1P31415 ARL2BPP2-201ENST00000550907 489 ntBASIC1.66□□□□□ -2.14
CASQ1P31415 MIR4422-201ENST00000581938 83 ntBASIC1.66□□□□□ -2.14
CASQ1P31415 AL589765.7-201ENST00000601684 629 ntTSL 3 BASIC1.66□□□□□ -2.14
CASQ1P31415 AC098483.2-201ENST00000603158 454 ntBASIC1.66□□□□□ -2.14
CASQ1P31415 AP001485.1-201ENST00000604799 199 ntBASIC1.66□□□□□ -2.14
CASQ1P31415 AL022345.1-201ENST00000607292 135 ntBASIC1.66□□□□□ -2.14
CASQ1P31415 AC078880.5-201ENST00000617845 421 ntBASIC1.66□□□□□ -2.14
CASQ1P31415 AC091965.5-201ENST00000624785 342 ntBASIC1.66□□□□□ -2.14
CASQ1P31415 KBTBD3-207ENST00000534815 3396 ntTSL 5 BASIC1.65□□□□□ -2.15
CASQ1P31415 HSFY1P1-202ENST00000425038 1381 ntTSL 1 (best) BASIC1.65□□□□□ -2.15
CASQ1P31415 RNU1-42P-201ENST00000364033 160 ntBASIC1.65□□□□□ -2.15
CASQ1P31415 Z98749.2-208ENST00000381646 500 ntBASIC1.65□□□□□ -2.15
CASQ1P31415 MIR518D-201ENST00000385014 87 ntBASIC1.65□□□□□ -2.15
CASQ1P31415 SNORA40.18-201ENST00000391200 128 ntBASIC1.65□□□□□ -2.15
CASQ1P31415 MIR1304-201ENST00000408243 91 ntBASIC1.65□□□□□ -2.15
CASQ1P31415 Z92545.1-201ENST00000411782 234 ntBASIC1.65□□□□□ -2.15
CASQ1P31415 AC104777.3-201ENST00000416350 545 ntTSL 3 BASIC1.65□□□□□ -2.15
CASQ1P31415 MTCO3P46-201ENST00000425787 232 ntBASIC1.65□□□□□ -2.15
CASQ1P31415 AC003084.1-201ENST00000427030 435 ntTSL 5 BASIC1.65□□□□□ -2.15
CASQ1P31415 FO393414.1-201ENST00000428697 1184 ntBASIC1.65□□□□□ -2.15
CASQ1P31415 ZNF385D-AS2-201ENST00000436306 424 ntTSL 5 BASIC1.65□□□□□ -2.15
CASQ1P31415 PRELID3BP1-201ENST00000457142 540 ntBASIC1.65□□□□□ -2.15
CASQ1P31415 MEMO1P3-201ENST00000459811 302 ntBASIC1.65□□□□□ -2.15
CASQ1P31415 AC079917.1-202ENST00000534059 625 ntTSL 3 BASIC1.65□□□□□ -2.15
CASQ1P31415 AP002770.2-201ENST00000543613 532 ntBASIC1.65□□□□□ -2.15
CASQ1P31415 AL355076.2-202ENST00000553754 574 ntTSL 4 BASIC1.65□□□□□ -2.15
CASQ1P31415 ETFRF1-202ENST00000553788 708 ntTSL 3 BASIC1.65□□□□□ -2.15
CASQ1P31415 AC091588.1-201ENST00000578504 359 ntTSL 3 BASIC1.65□□□□□ -2.15
CASQ1P31415 AC069061.2-202ENST00000580280 357 ntTSL 3 BASIC1.65□□□□□ -2.15
CASQ1P31415 AC004160.1-210ENST00000599875 689 ntTSL 5 BASIC1.65□□□□□ -2.15
CASQ1P31415 AC010900.2-201ENST00000604508 210 ntBASIC1.65□□□□□ -2.15
CASQ1P31415 PRPSAP2-229ENST00000628609 192 ntTSL 5 BASIC1.65□□□□□ -2.15
CASQ1P31415 AC006355.2-201ENST00000629240 317 ntTSL 3 BASIC1.65□□□□□ -2.15
CASQ1P31415 MTND4P23-201ENST00000447723 1363 ntBASIC1.64□□□□□ -2.15
CASQ1P31415 UBE2Q2P1-202ENST00000354771 883 ntBASIC1.64□□□□□ -2.15
CASQ1P31415 RNU6-661P-201ENST00000362409 107 ntBASIC1.64□□□□□ -2.15
CASQ1P31415 RNU1-58P-201ENST00000362413 163 ntBASIC1.64□□□□□ -2.15
CASQ1P31415 RNU6-288P-201ENST00000363690 104 ntBASIC1.64□□□□□ -2.15
CASQ1P31415 RNU6-188P-201ENST00000364207 107 ntBASIC1.64□□□□□ -2.15
CASQ1P31415 RPL30P13-201ENST00000418873 348 ntBASIC1.64□□□□□ -2.15
CASQ1P31415 AL445669.1-201ENST00000426743 755 ntBASIC1.64□□□□□ -2.15
CASQ1P31415 ELOCP30-201ENST00000447108 299 ntBASIC1.64□□□□□ -2.15
CASQ1P31415 AL356272.1-201ENST00000454538 832 ntTSL 2 BASIC1.64□□□□□ -2.15
CASQ1P31415 USP9YP10-201ENST00000454868 628 ntBASIC1.64□□□□□ -2.15
CASQ1P31415 BTF3P15-201ENST00000455606 336 ntBASIC1.64□□□□□ -2.15
CASQ1P31415 LRRC70-203ENST00000491184 703 ntTSL 3 BASIC1.64□□□□□ -2.15
CASQ1P31415 PTP4A1P4-201ENST00000512479 322 ntBASIC1.64□□□□□ -2.15
CASQ1P31415 Y_RNA.675-201ENST00000516389 149 ntBASIC1.64□□□□□ -2.15
CASQ1P31415 AC010196.1-201ENST00000550014 450 ntTSL 5 BASIC1.64□□□□□ -2.15
CASQ1P31415 AL445074.1-201ENST00000555362 318 ntTSL 2 BASIC1.64□□□□□ -2.15
CASQ1P31415 AC023906.2-201ENST00000558343 462 ntTSL 3 BASIC1.64□□□□□ -2.15
CASQ1P31415 AC136619.2-201ENST00000563361 631 ntBASIC1.64□□□□□ -2.15
CASQ1P31415 AC068025.2-201ENST00000584958 419 ntTSL 5 BASIC1.64□□□□□ -2.15
CASQ1P31415 AL133445.2-201ENST00000611191 527 ntBASIC1.64□□□□□ -2.15
Retrieved 100 of 98,524 protein–RNA pairs in 122.9 ms