Protein–RNA interactions for Protein: P18848

ATF4, Cyclic AMP-dependent transcription factor ATF-4, humanhuman

Predicted RBP Predictions only

Length 351 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ATF4P18848 B3GNTL1P2-201ENST00000603673 288 ntBASIC4.01□□□□□ -1.77
ATF4P18848 RNU6-91P-201ENST00000607774 107 ntBASIC4.01□□□□□ -1.77
ATF4P18848 USP32P2-207ENST00000608376 253 ntTSL 5 BASIC4.01□□□□□ -1.77
ATF4P18848 MIR7155-201ENST00000615925 56 ntBASIC4.01□□□□□ -1.77
ATF4P18848 MIR4272-201ENST00000635924 64 ntBASIC4.01□□□□□ -1.77
ATF4P18848 TMEM67-202ENST00000409623 3255 ntTSL 2 BASIC4.01□□□□□ -1.77
ATF4P18848 DHX9P1-201ENST00000436565 3076 ntBASIC4.01□□□□□ -1.77
ATF4P18848 IFT80-220ENST00000483465 4044 ntTSL 1 (best) BASIC4.01□□□□□ -1.77
ATF4P18848 SNX16-212ENST00000615066 1918 ntTSL 5 BASIC4.01□□□□□ -1.77
ATF4P18848 CACNB4-257ENST00000637547 7658 ntTSL 5 BASIC4.01□□□□□ -1.77
ATF4P18848 SLC16A7-201ENST00000261187 11777 ntAPPRIS P1 TSL 1 (best) BASIC4□□□□□ -1.77
ATF4P18848 SYNE2-204ENST00000358025 21842 ntAPPRIS P3 TSL 5 BASIC4□□□□□ -1.77
ATF4P18848 LINC01684-201ENST00000415182 2176 ntTSL 1 (best) BASIC4□□□□□ -1.77
ATF4P18848 AC002543.1-201ENST00000299783 1954 ntBASIC4□□□□□ -1.77
ATF4P18848 DNAH6-201ENST00000237449 12666 ntAPPRIS P1 TSL 5 BASIC4□□□□□ -1.77
ATF4P18848 CASK-207ENST00000421587 8204 ntAPPRIS ALT2 TSL 1 (best) BASIC4□□□□□ -1.77
ATF4P18848 SNORD32A-201ENST00000364805 84 ntBASIC4□□□□□ -1.77
ATF4P18848 OR51I1-201ENST00000380211 945 ntAPPRIS P1 BASIC4□□□□□ -1.77
ATF4P18848 Y_RNA.455-201ENST00000384230 98 ntBASIC4□□□□□ -1.77
ATF4P18848 MIR628-201ENST00000385229 95 ntBASIC4□□□□□ -1.77
ATF4P18848 MIR591-201ENST00000385290 95 ntBASIC4□□□□□ -1.77
ATF4P18848 RNA5SP354-201ENST00000391247 136 ntBASIC4□□□□□ -1.77
ATF4P18848 SAR1AP2-201ENST00000392696 594 ntBASIC4□□□□□ -1.77
ATF4P18848 MS4A4E-202ENST00000398986 522 ntAPPRIS P1 TSL 5 BASIC4□□□□□ -1.77
ATF4P18848 AL162411.1-201ENST00000413145 526 ntTSL 2 BASIC4□□□□□ -1.77
ATF4P18848 RPL23AP95-201ENST00000426806 265 ntBASIC4□□□□□ -1.77
ATF4P18848 AC069540.2-201ENST00000441776 351 ntTSL 3 BASIC4□□□□□ -1.77
ATF4P18848 AL139121.1-201ENST00000445647 244 ntTSL 2 BASIC4□□□□□ -1.77
ATF4P18848 RPL39P29-201ENST00000447779 157 ntBASIC4□□□□□ -1.77
ATF4P18848 AL592431.1-201ENST00000451090 317 ntTSL 3 BASIC4□□□□□ -1.77
ATF4P18848 snoU13.30-201ENST00000458951 104 ntBASIC4□□□□□ -1.77
ATF4P18848 RNU7-169P-201ENST00000459456 61 ntBASIC4□□□□□ -1.77
ATF4P18848 AP001025.1-201ENST00000486139 332 ntBASIC4□□□□□ -1.77
ATF4P18848 AC004889.1-208ENST00000489077 423 ntTSL 3 BASIC4□□□□□ -1.77
ATF4P18848 RN7SL558P-201ENST00000497468 299 ntBASIC4□□□□□ -1.77
ATF4P18848 SNORA40.14-201ENST00000516543 86 ntBASIC4□□□□□ -1.77
ATF4P18848 SNORD59.2-201ENST00000516873 68 ntBASIC4□□□□□ -1.77
ATF4P18848 APPL2-203ENST00000546731 684 ntTSL 2 BASIC4□□□□□ -1.77
ATF4P18848 MIR1269B-201ENST00000580405 75 ntBASIC4□□□□□ -1.77
ATF4P18848 VN1R91P-201ENST00000594377 169 ntBASIC4□□□□□ -1.77
ATF4P18848 AL132822.1-201ENST00000617063 513 ntBASIC4□□□□□ -1.77
ATF4P18848 AC008121.3-201ENST00000618726 433 ntBASIC4□□□□□ -1.77
ATF4P18848 SCAI-201ENST00000336505 12079 ntAPPRIS P1 TSL 1 (best) BASIC4□□□□□ -1.77
ATF4P18848 ERGIC2-201ENST00000360150 5014 ntAPPRIS P1 TSL 1 (best) BASIC4□□□□□ -1.77
ATF4P18848 AC091812.1-201ENST00000432235 1948 ntBASIC3.99□□□□□ -1.77
ATF4P18848 LRIT3-201ENST00000327908 3781 ntTSL 2 BASIC3.99□□□□□ -1.77
ATF4P18848 KNTC1-204ENST00000436959 2412 ntTSL 2 BASIC3.99□□□□□ -1.77
ATF4P18848 MIR133B-201ENST00000362210 119 ntBASIC3.99□□□□□ -1.77
ATF4P18848 SNORA14A-201ENST00000364773 135 ntBASIC3.99□□□□□ -1.77
ATF4P18848 SNORD14.1-201ENST00000365609 90 ntBASIC3.99□□□□□ -1.77
ATF4P18848 RNU6-622P-201ENST00000384272 103 ntBASIC3.99□□□□□ -1.77
ATF4P18848 Y_RNA.504-201ENST00000384481 104 ntBASIC3.99□□□□□ -1.77
ATF4P18848 Y_RNA.526-201ENST00000384572 110 ntBASIC3.99□□□□□ -1.77
ATF4P18848 IGLV7-43-201ENST00000390298 385 ntAPPRIS P1 BASIC3.99□□□□□ -1.77
ATF4P18848 PTMAP5-201ENST00000393073 333 ntBASIC3.99□□□□□ -1.77
ATF4P18848 RNU6ATAC18P-201ENST00000408413 101 ntBASIC3.99□□□□□ -1.77
ATF4P18848 MTCO3P19-201ENST00000415864 321 ntBASIC3.99□□□□□ -1.77
ATF4P18848 AL157378.1-201ENST00000424506 265 ntTSL 5 BASIC3.99□□□□□ -1.77
ATF4P18848 AC078809.1-201ENST00000427601 140 ntBASIC3.99□□□□□ -1.77
ATF4P18848 MTND3P2-201ENST00000438452 342 ntBASIC3.99□□□□□ -1.77
ATF4P18848 RPS29P10-201ENST00000439197 166 ntBASIC3.99□□□□□ -1.77
ATF4P18848 AC104634.1-201ENST00000452720 462 ntBASIC3.99□□□□□ -1.77
ATF4P18848 RPL30P12-201ENST00000474666 353 ntBASIC3.99□□□□□ -1.77
ATF4P18848 GZMAP1-201ENST00000503054 631 ntBASIC3.99□□□□□ -1.77
ATF4P18848 AC099499.1-201ENST00000505040 558 ntTSL 3 BASIC3.99□□□□□ -1.77
ATF4P18848 AC012400.1-201ENST00000518452 381 ntBASIC3.99□□□□□ -1.77
ATF4P18848 AC022039.1-201ENST00000527110 488 ntTSL 2 BASIC3.99□□□□□ -1.77
ATF4P18848 MRPS36P4-201ENST00000534436 298 ntBASIC3.99□□□□□ -1.77
ATF4P18848 AC126177.2-201ENST00000552154 452 ntTSL 3 BASIC3.99□□□□□ -1.77
ATF4P18848 AC006600.1-201ENST00000572529 153 ntBASIC3.99□□□□□ -1.77
ATF4P18848 ZNF562-205ENST00000587392 583 ntTSL 2 BASIC3.99□□□□□ -1.77
ATF4P18848 RPL23AP78-201ENST00000599928 470 ntBASIC3.99□□□□□ -1.77
ATF4P18848 AL355877.2-201ENST00000603670 358 ntBASIC3.99□□□□□ -1.77
ATF4P18848 SNORD58B-201ENST00000607313 66 ntBASIC3.99□□□□□ -1.77
ATF4P18848 AC008035.1-201ENST00000607353 448 ntTSL 3 BASIC3.99□□□□□ -1.77
ATF4P18848 AC100827.5-201ENST00000615883 426 ntBASIC3.99□□□□□ -1.77
ATF4P18848 MIR6719-201ENST00000622428 87 ntBASIC3.99□□□□□ -1.77
ATF4P18848 PLS1-201ENST00000337777 3755 ntAPPRIS P1 TSL 1 (best) BASIC3.99□□□□□ -1.77
ATF4P18848 AL353743.1-202ENST00000431724 1695 ntBASIC3.99□□□□□ -1.77
ATF4P18848 FGD4-211ENST00000531134 2924 ntTSL 2 BASIC3.99□□□□□ -1.77
ATF4P18848 AGTR1-204ENST00000418473 2071 ntTSL 5 BASIC3.99□□□□□ -1.77
ATF4P18848 FER-201ENST00000281092 12119 ntAPPRIS P1 TSL 1 (best) BASIC3.99□□□□□ -1.77
ATF4P18848 ZNF836-204ENST00000597252 3209 ntAPPRIS P2 TSL 2 BASIC3.99□□□□□ -1.77
ATF4P18848 ABCA12-201ENST00000272895 9100 ntAPPRIS P1 TSL 1 (best) BASIC3.98□□□□□ -1.77
ATF4P18848 AC018555.1-201ENST00000567548 1980 ntBASIC3.98□□□□□ -1.77
ATF4P18848 FAM216B-201ENST00000313851 3243 ntAPPRIS P1 TSL 1 (best) BASIC3.98□□□□□ -1.77
ATF4P18848 ARHGAP21-218ENST00000636789 4210 ntTSL 2 BASIC3.98□□□□□ -1.77
ATF4P18848 PROS1-203ENST00000407433 3335 ntTSL 1 (best) BASIC3.98□□□□□ -1.77
ATF4P18848 RPL26-201ENST00000293842 524 ntAPPRIS P1 TSL 1 (best) BASIC3.98□□□□□ -1.77
ATF4P18848 RCAN3-201ENST00000374393 382 ntTSL 1 (best) BASIC3.98□□□□□ -1.77
ATF4P18848 DEFB119-203ENST00000376321 457 ntAPPRIS P3 TSL 1 (best) BASIC3.98□□□□□ -1.77
ATF4P18848 Y_RNA.405-201ENST00000383979 100 ntBASIC3.98□□□□□ -1.77
ATF4P18848 Y_RNA.451-201ENST00000384200 100 ntBASIC3.98□□□□□ -1.77
ATF4P18848 Y_RNA.485-201ENST00000384395 102 ntBASIC3.98□□□□□ -1.77
ATF4P18848 Y_RNA.524-201ENST00000384564 100 ntBASIC3.98□□□□□ -1.77
ATF4P18848 Y_RNA.561-201ENST00000384694 100 ntBASIC3.98□□□□□ -1.77
ATF4P18848 MIR190B-201ENST00000401119 79 ntBASIC3.98□□□□□ -1.77
ATF4P18848 AL356057.3-201ENST00000402607 340 ntBASIC3.98□□□□□ -1.77
ATF4P18848 RN7SKP61-201ENST00000410642 295 ntBASIC3.98□□□□□ -1.77
ATF4P18848 RPL23AP27-201ENST00000415161 451 ntBASIC3.98□□□□□ -1.77
Retrieved 100 of 98,524 protein–RNA pairs in 88.9 ms