Protein–RNA interactions for Protein: P08254

MMP3, Stromelysin-1, humanhuman

Predictions only

Length 477 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MMP3P08254 YPEL5P1-201ENST00000419731 367 ntBASIC3.28□□□□□ -1.88
MMP3P08254 AC007919.1-201ENST00000429380 217 ntBASIC3.28□□□□□ -1.88
MMP3P08254 AC008067.1-203ENST00000430876 359 ntTSL 3 BASIC3.28□□□□□ -1.88
MMP3P08254 RPL36AP53-201ENST00000432891 316 ntBASIC3.28□□□□□ -1.88
MMP3P08254 AL360169.1-201ENST00000435116 143 ntTSL 5 BASIC3.28□□□□□ -1.88
MMP3P08254 MYCBP2-AS1-203ENST00000450627 349 ntTSL 3 BASIC3.28□□□□□ -1.88
MMP3P08254 VN1R17P-201ENST00000472048 1090 ntBASIC3.28□□□□□ -1.88
MMP3P08254 HMGB3P15-201ENST00000507326 574 ntBASIC3.28□□□□□ -1.88
MMP3P08254 AC098591.2-201ENST00000510152 315 ntBASIC3.28□□□□□ -1.88
MMP3P08254 SNORA31.3-201ENST00000516029 96 ntBASIC3.28□□□□□ -1.88
MMP3P08254 RNU6-507P-201ENST00000516045 100 ntBASIC3.28□□□□□ -1.88
MMP3P08254 RNU6-677P-201ENST00000516914 101 ntBASIC3.28□□□□□ -1.88
MMP3P08254 AC093331.1-201ENST00000521474 169 ntBASIC3.28□□□□□ -1.88
MMP3P08254 AC021698.1-201ENST00000524858 716 ntTSL 3 BASIC3.28□□□□□ -1.88
MMP3P08254 AF235103.2-201ENST00000525753 346 ntBASIC3.28□□□□□ -1.88
MMP3P08254 AP001189.6-201ENST00000528781 831 ntTSL 1 (best) BASIC3.28□□□□□ -1.88
MMP3P08254 RANP3-201ENST00000530970 276 ntBASIC3.28□□□□□ -1.88
MMP3P08254 AC107016.2-201ENST00000547968 190 ntBASIC3.28□□□□□ -1.88
MMP3P08254 AL138976.2-201ENST00000563989 694 ntBASIC3.28□□□□□ -1.88
MMP3P08254 AC026462.2-201ENST00000565771 286 ntTSL 2 BASIC3.28□□□□□ -1.88
MMP3P08254 AC104763.2-201ENST00000604179 382 ntBASIC3.28□□□□□ -1.88
MMP3P08254 AC022893.3-201ENST00000607665 437 ntBASIC3.28□□□□□ -1.88
MMP3P08254 C8orf59-208ENST00000612809 475 ntAPPRIS P1 TSL 1 (best) BASIC3.28□□□□□ -1.88
MMP3P08254 CNOT1-223ENST00000628857 291 ntTSL 5 BASIC3.28□□□□□ -1.88
MMP3P08254 SNORA50A-202ENST00000629536 136 ntBASIC3.28□□□□□ -1.88
MMP3P08254 MTND5P42-201ENST00000637720 498 ntBASIC3.28□□□□□ -1.88
MMP3P08254 AP003481.1-201ENST00000637808 351 ntTSL 5 BASIC3.28□□□□□ -1.88
MMP3P08254 ZMYM1-201ENST00000359858 4175 ntAPPRIS P1 TSL 1 (best) BASIC3.28□□□□□ -1.88
MMP3P08254 AC009487.2-201ENST00000420969 6821 ntBASIC3.28□□□□□ -1.88
MMP3P08254 NEB-218ENST00000603639 25578 ntAPPRIS ALT2 TSL 5 BASIC3.28□□□□□ -1.88
MMP3P08254 NEB-219ENST00000604864 25578 ntAPPRIS ALT2 TSL 5 BASIC3.28□□□□□ -1.88
MMP3P08254 DNAJC2-201ENST00000249270 1846 ntTSL 1 (best) BASIC3.28□□□□□ -1.88
MMP3P08254 ROS1-202ENST00000368508 7435 ntAPPRIS P2 TSL 1 (best) BASIC3.27□□□□□ -1.89
MMP3P08254 SLC30A6-202ENST00000357055 4758 ntTSL 2 BASIC3.27□□□□□ -1.89
MMP3P08254 EMCN-202ENST00000305864 1575 ntTSL 1 (best) BASIC3.27□□□□□ -1.89
MMP3P08254 RNU6-512P-201ENST00000364438 103 ntBASIC3.27□□□□□ -1.89
MMP3P08254 SNORA9.2-201ENST00000365361 133 ntBASIC3.27□□□□□ -1.89
MMP3P08254 CD84-204ENST00000368048 1098 ntAPPRIS ALT2 TSL 1 (best) BASIC3.27□□□□□ -1.89
MMP3P08254 DEFB109C-201ENST00000382575 264 ntBASIC3.27□□□□□ -1.89
MMP3P08254 DEFB109B-201ENST00000382656 264 ntBASIC3.27□□□□□ -1.89
MMP3P08254 TRAJ21-201ENST00000390516 55 ntAPPRIS P1 BASIC3.27□□□□□ -1.89
MMP3P08254 TRAJ17-201ENST00000390520 63 ntAPPRIS P1 BASIC3.27□□□□□ -1.89
MMP3P08254 RNU6-332P-201ENST00000391193 108 ntBASIC3.27□□□□□ -1.89
MMP3P08254 CD3D-202ENST00000392884 476 ntTSL 2 BASIC3.27□□□□□ -1.89
MMP3P08254 RNA5SP111-201ENST00000411386 101 ntBASIC3.27□□□□□ -1.89
MMP3P08254 RPL32P35-201ENST00000415214 394 ntBASIC3.27□□□□□ -1.89
MMP3P08254 AC005062.1-207ENST00000418442 587 ntTSL 3 BASIC3.27□□□□□ -1.89
MMP3P08254 AL139254.1-201ENST00000421114 376 ntTSL 3 BASIC3.27□□□□□ -1.89
MMP3P08254 AC114808.2-201ENST00000428335 536 ntTSL 4 BASIC3.27□□□□□ -1.89
MMP3P08254 RPL21P40-201ENST00000428586 483 ntBASIC3.27□□□□□ -1.89
MMP3P08254 LINC01817-201ENST00000429317 564 ntTSL 4 BASIC3.27□□□□□ -1.89
MMP3P08254 AL121601.2-201ENST00000438019 707 ntBASIC3.27□□□□□ -1.89
MMP3P08254 AC069540.2-201ENST00000441776 351 ntTSL 3 BASIC3.27□□□□□ -1.89
MMP3P08254 MTND3P16-201ENST00000452205 344 ntBASIC3.27□□□□□ -1.89
MMP3P08254 NHS-AS1-201ENST00000452788 366 ntTSL 3 BASIC3.27□□□□□ -1.89
MMP3P08254 AL445465.2-201ENST00000455530 461 ntTSL 2 BASIC3.27□□□□□ -1.89
MMP3P08254 RNU7-180P-201ENST00000459240 63 ntBASIC3.27□□□□□ -1.89
MMP3P08254 SNORA20.3-201ENST00000516880 132 ntBASIC3.27□□□□□ -1.89
MMP3P08254 MRPL51-203ENST00000538814 501 ntTSL 2 BASIC3.27□□□□□ -1.89
MMP3P08254 AP000462.2-203ENST00000540545 715 ntTSL 5 BASIC3.27□□□□□ -1.89
MMP3P08254 AC096558.2-201ENST00000546678 506 ntTSL 3 BASIC3.27□□□□□ -1.89
MMP3P08254 ADI1P3-201ENST00000549509 470 ntBASIC3.27□□□□□ -1.89
MMP3P08254 AC023510.1-201ENST00000555862 490 ntTSL 2 BASIC3.27□□□□□ -1.89
MMP3P08254 AL118558.2-201ENST00000556294 238 ntBASIC3.27□□□□□ -1.89
MMP3P08254 FOPNL-205ENST00000573429 646 ntTSL 3 BASIC3.27□□□□□ -1.89
MMP3P08254 LINC01515-204ENST00000595269 402 ntTSL 5 BASIC3.27□□□□□ -1.89
MMP3P08254 AC013553.2-201ENST00000604244 589 ntBASIC3.27□□□□□ -1.89
MMP3P08254 AC013412.1-201ENST00000610687 192 ntBASIC3.27□□□□□ -1.89
MMP3P08254 AC099778.2-201ENST00000610904 211 ntBASIC3.27□□□□□ -1.89
MMP3P08254 AC092794.2-201ENST00000620933 563 ntBASIC3.27□□□□□ -1.89
MMP3P08254 HELZ-201ENST00000358691 13810 ntTSL 1 (best) BASIC3.27□□□□□ -1.89
MMP3P08254 RASSF8-210ENST00000541490 5505 ntAPPRIS P1 TSL 5 BASIC3.27□□□□□ -1.89
MMP3P08254 NBEAL1-203ENST00000449802 10938 ntAPPRIS P1 TSL 5 BASIC3.27□□□□□ -1.89
MMP3P08254 EFR3A-202ENST00000519656 5247 ntTSL 1 (best) BASIC3.26□□□□□ -1.89
MMP3P08254 ABCG2-204ENST00000515655 4276 ntTSL 1 (best) BASIC3.26□□□□□ -1.89
MMP3P08254 USP15-203ENST00000353364 14950 ntAPPRIS P3 TSL 1 (best) BASIC3.26□□□□□ -1.89
MMP3P08254 LINC01419-201ENST00000522365 1521 ntTSL 1 (best) BASIC3.26□□□□□ -1.89
MMP3P08254 UBE2L2-201ENST00000254302 429 ntBASIC3.26□□□□□ -1.89
MMP3P08254 AL139276.1-201ENST00000311910 1001 ntBASIC3.26□□□□□ -1.89
MMP3P08254 AC062016.1-201ENST00000355719 319 ntBASIC3.26□□□□□ -1.89
MMP3P08254 RNU4-66P-201ENST00000365199 138 ntBASIC3.26□□□□□ -1.89
MMP3P08254 RNU2-29P-201ENST00000410423 189 ntBASIC3.26□□□□□ -1.89
MMP3P08254 Y_RNA.615-201ENST00000410769 117 ntBASIC3.26□□□□□ -1.89
MMP3P08254 RPS12P24-201ENST00000412619 387 ntBASIC3.26□□□□□ -1.89
MMP3P08254 OR6C66P-201ENST00000414917 930 ntBASIC3.26□□□□□ -1.89
MMP3P08254 CALM2P2-201ENST00000428512 440 ntBASIC3.26□□□□□ -1.89
MMP3P08254 AL592045.1-201ENST00000429867 352 ntBASIC3.26□□□□□ -1.89
MMP3P08254 HMGB1P27-201ENST00000431429 603 ntBASIC3.26□□□□□ -1.89
MMP3P08254 AC108938.1-201ENST00000451204 136 ntBASIC3.26□□□□□ -1.89
MMP3P08254 MCHR2-AS1-203ENST00000451220 429 ntTSL 3 BASIC3.26□□□□□ -1.89
MMP3P08254 SNRPFP3-201ENST00000457792 225 ntBASIC3.26□□□□□ -1.89
MMP3P08254 LINC00971-201ENST00000482721 535 ntTSL 2 BASIC3.26□□□□□ -1.89
MMP3P08254 AC008628.2-201ENST00000502605 298 ntBASIC3.26□□□□□ -1.89
MMP3P08254 MTCO2P30-201ENST00000503662 364 ntBASIC3.26□□□□□ -1.89
MMP3P08254 AC105389.2-201ENST00000506475 435 ntTSL 3 BASIC3.26□□□□□ -1.89
MMP3P08254 CCDC34P1-201ENST00000507441 517 ntBASIC3.26□□□□□ -1.89
MMP3P08254 AC114786.4-201ENST00000508771 728 ntBASIC3.26□□□□□ -1.89
MMP3P08254 AC024022.1-202ENST00000508911 394 ntTSL 2 BASIC3.26□□□□□ -1.89
MMP3P08254 AC093534.2-201ENST00000511418 420 ntTSL 3 BASIC3.26□□□□□ -1.89
MMP3P08254 SCARNA15.2-201ENST00000516409 127 ntBASIC3.26□□□□□ -1.89
Retrieved 100 of 98,524 protein–RNA pairs in 130.2 ms