Protein–RNA interactions for Protein: P08100

RHO, Rhodopsin, humanhuman

Predictions only

Length 348 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RHOP08100 Y_RNA.534-201ENST00000384599 112 ntBASIC3.61□□□□□ -1.83
RHOP08100 IGLV5-37-201ENST00000390300 374 ntAPPRIS P1 BASIC3.61□□□□□ -1.83
RHOP08100 MIR450B-201ENST00000401182 78 ntBASIC3.61□□□□□ -1.83
RHOP08100 AL139397.2-201ENST00000404529 772 ntBASIC3.61□□□□□ -1.83
RHOP08100 RNU6-370P-201ENST00000411008 104 ntBASIC3.61□□□□□ -1.83
RHOP08100 RNU6-954P-201ENST00000411355 107 ntBASIC3.61□□□□□ -1.83
RHOP08100 RPS12P24-201ENST00000412619 387 ntBASIC3.61□□□□□ -1.83
RHOP08100 TOMM22P1-201ENST00000418578 312 ntBASIC3.61□□□□□ -1.83
RHOP08100 ATP6V0E1P4-201ENST00000427294 242 ntBASIC3.61□□□□□ -1.83
RHOP08100 HMGB1P27-201ENST00000431429 603 ntBASIC3.61□□□□□ -1.83
RHOP08100 SNAP23P1-201ENST00000433229 246 ntBASIC3.61□□□□□ -1.83
RHOP08100 AL590999.1-206ENST00000437947 436 ntTSL 3 BASIC3.61□□□□□ -1.83
RHOP08100 HMGB1P12-201ENST00000438594 598 ntBASIC3.61□□□□□ -1.83
RHOP08100 BRK1P2-201ENST00000442875 223 ntBASIC3.61□□□□□ -1.83
RHOP08100 LINC01710-201ENST00000446002 390 ntTSL 5 BASIC3.61□□□□□ -1.83
RHOP08100 AC010285.1-201ENST00000470580 392 ntBASIC3.61□□□□□ -1.83
RHOP08100 RN7SL594P-201ENST00000470590 287 ntBASIC3.61□□□□□ -1.83
RHOP08100 HMGN1P10-201ENST00000474557 553 ntBASIC3.61□□□□□ -1.83
RHOP08100 RPS4XP13-201ENST00000483219 789 ntBASIC3.61□□□□□ -1.83
RHOP08100 AC108860.1-201ENST00000484521 383 ntBASIC3.61□□□□□ -1.83
RHOP08100 AC008526.1-201ENST00000509149 338 ntBASIC3.61□□□□□ -1.83
RHOP08100 FCF1P8-201ENST00000510322 597 ntBASIC3.61□□□□□ -1.83
RHOP08100 AC025475.1-201ENST00000512939 487 ntTSL 3 BASIC3.61□□□□□ -1.83
RHOP08100 AC079160.1-201ENST00000513489 739 ntTSL 1 (best) BASIC3.61□□□□□ -1.83
RHOP08100 CYCSP27-201ENST00000527643 293 ntBASIC3.61□□□□□ -1.83
RHOP08100 APOOP3-201ENST00000536787 586 ntBASIC3.61□□□□□ -1.83
RHOP08100 LINC02442-201ENST00000537732 343 ntTSL 3 BASIC3.61□□□□□ -1.83
RHOP08100 APAF1-207ENST00000547743 651 ntTSL 3 BASIC3.61□□□□□ -1.83
RHOP08100 PSMA4-205ENST00000558281 773 ntTSL 3 BASIC3.61□□□□□ -1.83
RHOP08100 ZNF192P1-203ENST00000565888 810 ntBASIC3.61□□□□□ -1.83
RHOP08100 FAM60BP-201ENST00000578364 658 ntBASIC3.61□□□□□ -1.83
RHOP08100 MIR4644-201ENST00000579929 84 ntBASIC3.61□□□□□ -1.83
RHOP08100 AC138761.3-201ENST00000579993 334 ntBASIC3.61□□□□□ -1.83
RHOP08100 MIR3690-201ENST00000580266 75 ntBASIC3.61□□□□□ -1.83
RHOP08100 AL589765.7-201ENST00000601684 629 ntTSL 3 BASIC3.61□□□□□ -1.83
RHOP08100 ATP1B3P1-201ENST00000605365 821 ntBASIC3.61□□□□□ -1.83
RHOP08100 AC034102.8-201ENST00000615146 484 ntBASIC3.61□□□□□ -1.83
RHOP08100 HOTAIRM1_5.1-201ENST00000619311 145 ntBASIC3.61□□□□□ -1.83
RHOP08100 LINC02086-205ENST00000628749 679 ntTSL 5 BASIC3.61□□□□□ -1.83
RHOP08100 ERBIN-212ENST00000508515 4374 ntTSL 5 BASIC3.61□□□□□ -1.83
RHOP08100 MME-201ENST00000360490 2360 ntAPPRIS P1 TSL 1 (best) BASIC3.61□□□□□ -1.83
RHOP08100 ZNF883-201ENST00000619044 2051 ntAPPRIS P1 TSL 5 BASIC3.61□□□□□ -1.83
RHOP08100 GPRC6A-201ENST00000310357 2860 ntAPPRIS P1 TSL 1 (best) BASIC3.61□□□□□ -1.83
RHOP08100 SPZ1-201ENST00000296739 1868 ntAPPRIS P2 BASIC3.6□□□□□ -1.83
RHOP08100 UFM1-201ENST00000239878 3138 ntAPPRIS P1 TSL 1 (best) BASIC3.6□□□□□ -1.83
RHOP08100 FMNL2-202ENST00000475377 3648 ntTSL 5 BASIC3.6□□□□□ -1.83
RHOP08100 SLC2A2-201ENST00000314251 3210 ntAPPRIS P1 TSL 1 (best) BASIC3.6□□□□□ -1.83
RHOP08100 RNF6-201ENST00000346166 3282 ntAPPRIS P1 TSL 1 (best) BASIC3.6□□□□□ -1.83
RHOP08100 SYNE1-207ENST00000367255 27748 ntAPPRIS P4 TSL 1 (best) BASIC3.6□□□□□ -1.83
RHOP08100 MIS12-201ENST00000381165 2505 ntAPPRIS P1 TSL 1 (best) BASIC3.6□□□□□ -1.83
RHOP08100 KBTBD3-207ENST00000534815 3396 ntTSL 5 BASIC3.6□□□□□ -1.83
RHOP08100 LINC00907-209ENST00000593234 3376 ntTSL 1 (best) BASIC3.6□□□□□ -1.83
RHOP08100 Y_RNA.395-201ENST00000383945 109 ntBASIC3.6□□□□□ -1.83
RHOP08100 AC073323.1-201ENST00000419832 451 ntTSL 2 BASIC3.6□□□□□ -1.83
RHOP08100 AL078601.2-201ENST00000429444 474 ntTSL 2 BASIC3.6□□□□□ -1.83
RHOP08100 BMPR1B-AS1-201ENST00000510795 511 ntTSL 3 BASIC3.6□□□□□ -1.83
RHOP08100 AC114316.1-201ENST00000511323 278 ntTSL 5 BASIC3.6□□□□□ -1.83
RHOP08100 RN7SKP24-201ENST00000515888 284 ntBASIC3.6□□□□□ -1.83
RHOP08100 AC136777.1-201ENST00000517765 369 ntTSL 4 BASIC3.6□□□□□ -1.83
RHOP08100 AL352979.2-201ENST00000556988 366 ntTSL 3 BASIC3.6□□□□□ -1.83
RHOP08100 AC009145.1-201ENST00000563230 433 ntTSL 3 BASIC3.6□□□□□ -1.83
RHOP08100 MIR4276-201ENST00000584832 70 ntBASIC3.6□□□□□ -1.83
RHOP08100 LINC02210-208ENST00000585118 546 ntTSL 1 (best) BASIC3.6□□□□□ -1.83
RHOP08100 AC080078.1-201ENST00000603643 410 ntTSL 3 BASIC3.6□□□□□ -1.83
RHOP08100 SNRPGP17-201ENST00000603780 214 ntBASIC3.6□□□□□ -1.83
RHOP08100 MIR15A-201ENST00000607334 83 ntBASIC3.6□□□□□ -1.83
RHOP08100 AC012531.5-201ENST00000611375 151 ntBASIC3.6□□□□□ -1.83
RHOP08100 PROX1-AS1-244ENST00000630355 599 ntTSL 5 BASIC3.6□□□□□ -1.83
RHOP08100 MTND4P27-201ENST00000450813 1354 ntBASIC3.6□□□□□ -1.83
RHOP08100 CNOT6L-201ENST00000504123 8843 ntAPPRIS P1 TSL 2 BASIC3.59□□□□□ -1.83
RHOP08100 MINPP1-204ENST00000536010 2215 ntTSL 1 (best) BASIC3.59□□□□□ -1.83
RHOP08100 USP33-201ENST00000357428 4155 ntTSL 5 BASIC3.59□□□□□ -1.83
RHOP08100 SGIP1-206ENST00000435165 3646 ntAPPRIS ALT2 TSL 2 BASIC3.59□□□□□ -1.83
RHOP08100 GABRG2-221ENST00000639683 3600 ntTSL 5 BASIC3.59□□□□□ -1.83
RHOP08100 DEFB108F-201ENST00000344638 222 ntBASIC3.59□□□□□ -1.83
RHOP08100 MIR423-201ENST00000362201 94 ntBASIC3.59□□□□□ -1.83
RHOP08100 RNU5A-1-201ENST00000362698 116 ntBASIC3.59□□□□□ -1.83
RHOP08100 RNU6-288P-201ENST00000363690 104 ntBASIC3.59□□□□□ -1.83
RHOP08100 RNU6-593P-201ENST00000364716 112 ntBASIC3.59□□□□□ -1.83
RHOP08100 Y_RNA.482-201ENST00000384377 111 ntBASIC3.59□□□□□ -1.83
RHOP08100 RNU6-45P-201ENST00000384471 107 ntBASIC3.59□□□□□ -1.83
RHOP08100 AL139039.1-201ENST00000401900 692 ntBASIC3.59□□□□□ -1.83
RHOP08100 PPP3R1-202ENST00000409377 684 ntTSL 3 BASIC3.59□□□□□ -1.83
RHOP08100 PLCE1-AS2-203ENST00000433038 396 ntTSL 2 BASIC3.59□□□□□ -1.83
RHOP08100 AC007557.1-201ENST00000451711 541 ntTSL 2 BASIC3.59□□□□□ -1.83
RHOP08100 Y_RNA.631-201ENST00000459607 101 ntBASIC3.59□□□□□ -1.83
RHOP08100 AC092919.1-201ENST00000467896 229 ntTSL 2 BASIC3.59□□□□□ -1.83
RHOP08100 AC117503.1-201ENST00000472241 394 ntBASIC3.59□□□□□ -1.83
RHOP08100 RPL31P60-201ENST00000478450 367 ntBASIC3.59□□□□□ -1.83
RHOP08100 RN7SL504P-201ENST00000494496 287 ntBASIC3.59□□□□□ -1.83
RHOP08100 RPS27P27-201ENST00000498779 255 ntBASIC3.59□□□□□ -1.83
RHOP08100 PHBP14-201ENST00000512887 367 ntBASIC3.59□□□□□ -1.83
RHOP08100 RNU6-914P-201ENST00000516749 109 ntBASIC3.59□□□□□ -1.83
RHOP08100 SKP1-203ENST00000517625 876 ntAPPRIS P4 TSL 3 BASIC3.59□□□□□ -1.83
RHOP08100 ELOCP31-201ENST00000540463 467 ntBASIC3.59□□□□□ -1.83
RHOP08100 AC092746.1-201ENST00000542819 562 ntTSL 4 BASIC3.59□□□□□ -1.83
RHOP08100 AC215217.1-201ENST00000562162 347 ntTSL 3 BASIC3.59□□□□□ -1.83
RHOP08100 AC007493.1-202ENST00000567899 517 ntTSL 2 BASIC3.59□□□□□ -1.83
RHOP08100 SMG1P7-203ENST00000573141 619 ntTSL 2 BASIC3.59□□□□□ -1.83
RHOP08100 MIR5680-201ENST00000577577 84 ntBASIC3.59□□□□□ -1.83
Retrieved 100 of 98,524 protein–RNA pairs in 110.6 ms