Protein–RNA interactions for Protein: P03905

MT-ND4, NADH-ubiquinone oxidoreductase chain 4, humanhuman

Predictions only

Length 459 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MT-ND4P03905 AC009902.1-201ENST00000519351 183 ntBASIC1.77□□□□□ -2.13
MT-ND4P03905 LINC02235-201ENST00000534675 466 ntTSL 5 BASIC1.77□□□□□ -2.13
MT-ND4P03905 MIR4999-201ENST00000585029 91 ntBASIC1.77□□□□□ -2.13
MT-ND4P03905 AC007229.1-201ENST00000590455 412 ntBASIC1.77□□□□□ -2.13
MT-ND4P03905 AL096840.1-201ENST00000603287 93 ntBASIC1.77□□□□□ -2.13
MT-ND4P03905 AC112187.2-201ENST00000604345 283 ntBASIC1.77□□□□□ -2.13
MT-ND4P03905 RNF219-AS1-205ENST00000605996 792 ntTSL 5 BASIC1.77□□□□□ -2.13
MT-ND4P03905 AC023490.1-201ENST00000614584 375 ntTSL 2 BASIC1.77□□□□□ -2.13
MT-ND4P03905 AL031667.3-201ENST00000620124 655 ntBASIC1.77□□□□□ -2.13
MT-ND4P03905 AC011718.1-201ENST00000622906 375 ntTSL 1 (best) BASIC1.77□□□□□ -2.13
MT-ND4P03905 U6.99-201ENST00000637524 83 ntBASIC1.77□□□□□ -2.13
MT-ND4P03905 OGN-202ENST00000375561 2743 ntAPPRIS P1 TSL 1 (best) BASIC1.77□□□□□ -2.13
MT-ND4P03905 ANKAR-201ENST00000313581 4391 ntAPPRIS P1 TSL 1 (best) BASIC1.77□□□□□ -2.13
MT-ND4P03905 CCDC82-202ENST00000423339 1878 ntAPPRIS P2 TSL 1 (best) BASIC1.76□□□□□ -2.13
MT-ND4P03905 LINC01592-202ENST00000518540 2367 ntTSL 2 BASIC1.76□□□□□ -2.13
MT-ND4P03905 IL33-202ENST00000417746 2327 ntTSL 2 BASIC1.76□□□□□ -2.13
MT-ND4P03905 Y_RNA.18-201ENST00000362461 102 ntBASIC1.76□□□□□ -2.13
MT-ND4P03905 RNY4P24-201ENST00000362735 96 ntBASIC1.76□□□□□ -2.13
MT-ND4P03905 SMIM11P1-201ENST00000369586 178 ntBASIC1.76□□□□□ -2.13
MT-ND4P03905 Y_RNA.510-201ENST00000384511 114 ntBASIC1.76□□□□□ -2.13
MT-ND4P03905 RNU6-253P-201ENST00000384730 105 ntBASIC1.76□□□□□ -2.13
MT-ND4P03905 MIR147B-201ENST00000390185 80 ntBASIC1.76□□□□□ -2.13
MT-ND4P03905 MIR676-201ENST00000390702 67 ntBASIC1.76□□□□□ -2.13
MT-ND4P03905 RPS12P24-201ENST00000412619 387 ntBASIC1.76□□□□□ -2.13
MT-ND4P03905 BX276092.3-201ENST00000424182 230 ntBASIC1.76□□□□□ -2.13
MT-ND4P03905 PTGES3P4-201ENST00000426243 356 ntBASIC1.76□□□□□ -2.13
MT-ND4P03905 AC093106.2-201ENST00000428212 385 ntBASIC1.76□□□□□ -2.13
MT-ND4P03905 AL353612.1-201ENST00000428769 465 ntTSL 3 BASIC1.76□□□□□ -2.13
MT-ND4P03905 AL596220.1-202ENST00000429768 314 ntTSL 3 BASIC1.76□□□□□ -2.13
MT-ND4P03905 AC114485.1-201ENST00000447916 657 ntTSL 3 BASIC1.76□□□□□ -2.13
MT-ND4P03905 MTND1P3-201ENST00000484956 952 ntBASIC1.76□□□□□ -2.13
MT-ND4P03905 AC034244.1-201ENST00000507687 207 ntBASIC1.76□□□□□ -2.13
MT-ND4P03905 RNU6-1003P-201ENST00000517099 105 ntBASIC1.76□□□□□ -2.13
MT-ND4P03905 SMIM18-201ENST00000517349 905 ntAPPRIS P1 TSL 2 BASIC1.76□□□□□ -2.13
MT-ND4P03905 AP002428.1-201ENST00000527345 380 ntTSL 3 BASIC1.76□□□□□ -2.13
MT-ND4P03905 AC084851.1-201ENST00000529105 249 ntBASIC1.76□□□□□ -2.13
MT-ND4P03905 KLRF2-201ENST00000535540 731 ntAPPRIS P1 TSL 1 (best) BASIC1.76□□□□□ -2.13
MT-ND4P03905 AP000462.2-203ENST00000540545 715 ntTSL 5 BASIC1.76□□□□□ -2.13
MT-ND4P03905 AC011611.4-201ENST00000547721 779 ntTSL 2 BASIC1.76□□□□□ -2.13
MT-ND4P03905 AC087286.1-201ENST00000560712 568 ntTSL 3 BASIC1.76□□□□□ -2.13
MT-ND4P03905 AC026464.5-201ENST00000562497 722 ntBASIC1.76□□□□□ -2.13
MT-ND4P03905 AC105245.1-201ENST00000581934 244 ntBASIC1.76□□□□□ -2.13
MT-ND4P03905 BNIP3P9-201ENST00000603714 553 ntBASIC1.76□□□□□ -2.13
MT-ND4P03905 uc_338.14-201ENST00000613162 166 ntBASIC1.76□□□□□ -2.13
MT-ND4P03905 AL589994.2-201ENST00000621124 579 ntBASIC1.76□□□□□ -2.13
MT-ND4P03905 AC025048.6-202ENST00000627667 438 ntBASIC1.76□□□□□ -2.13
MT-ND4P03905 Z99571.1-201ENST00000636677 394 ntBASIC1.76□□□□□ -2.13
MT-ND4P03905 MTND5P30-201ENST00000452896 1731 ntBASIC1.76□□□□□ -2.13
MT-ND4P03905 AL359854.1-201ENST00000614203 1594 ntBASIC1.76□□□□□ -2.13
MT-ND4P03905 AC107029.2-201ENST00000462011 2305 ntTSL 2 BASIC1.75□□□□□ -2.13
MT-ND4P03905 PRKD3-201ENST00000234179 5900 ntAPPRIS P1 TSL 1 (best) BASIC1.75□□□□□ -2.13
MT-ND4P03905 OR13G1-202ENST00000642119 2568 ntAPPRIS P1 BASIC1.75□□□□□ -2.13
MT-ND4P03905 EFCAB3-202ENST00000450662 1694 ntTSL 5 BASIC1.75□□□□□ -2.13
MT-ND4P03905 TRDJ3-201ENST00000390476 59 ntAPPRIS P1 BASIC1.75□□□□□ -2.13
MT-ND4P03905 RNU6-817P-201ENST00000391083 104 ntBASIC1.75□□□□□ -2.13
MT-ND4P03905 SNORA11.4-201ENST00000408823 129 ntBASIC1.75□□□□□ -2.13
MT-ND4P03905 AL138737.1-202ENST00000418834 876 ntTSL 3 BASIC1.75□□□□□ -2.13
MT-ND4P03905 AC093911.1-201ENST00000419129 552 ntTSL 4 BASIC1.75□□□□□ -2.13
MT-ND4P03905 AL731563.2-201ENST00000431293 291 ntTSL 5 BASIC1.75□□□□□ -2.13
MT-ND4P03905 AC016691.1-201ENST00000441321 413 ntBASIC1.75□□□□□ -2.13
MT-ND4P03905 BRK1P2-201ENST00000442875 223 ntBASIC1.75□□□□□ -2.13
MT-ND4P03905 LINC01038-201ENST00000457858 428 ntTSL 3 BASIC1.75□□□□□ -2.13
MT-ND4P03905 AC092620.2-201ENST00000458007 744 ntTSL 2 BASIC1.75□□□□□ -2.13
MT-ND4P03905 AC080013.2-201ENST00000460866 323 ntBASIC1.75□□□□□ -2.13
MT-ND4P03905 AC093752.1-212ENST00000500559 453 ntTSL 1 (best) BASIC1.75□□□□□ -2.13
MT-ND4P03905 PCAT4-202ENST00000514836 373 ntTSL 3 BASIC1.75□□□□□ -2.13
MT-ND4P03905 AC107934.1-201ENST00000522215 217 ntBASIC1.75□□□□□ -2.13
MT-ND4P03905 AC018410.2-201ENST00000540410 610 ntTSL 5 BASIC1.75□□□□□ -2.13
MT-ND4P03905 AL450442.1-201ENST00000554042 854 ntTSL 1 (best) BASIC1.75□□□□□ -2.13
MT-ND4P03905 AC084756.1-201ENST00000558237 606 ntTSL 5 BASIC1.75□□□□□ -2.13
MT-ND4P03905 AC090888.2-201ENST00000559765 1144 ntBASIC1.75□□□□□ -2.13
MT-ND4P03905 AL354943.1-201ENST00000572103 781 ntBASIC1.75□□□□□ -2.13
MT-ND4P03905 AP001004.1-201ENST00000582468 324 ntBASIC1.75□□□□□ -2.13
MT-ND4P03905 MIR7515HG-243ENST00000591400 1067 ntTSL 5 BASIC1.75□□□□□ -2.13
MT-ND4P03905 AC078899.2-201ENST00000595282 212 ntBASIC1.75□□□□□ -2.13
MT-ND4P03905 AC018714.1-201ENST00000605028 208 ntBASIC1.75□□□□□ -2.13
MT-ND4P03905 AC069294.1-201ENST00000608397 350 ntBASIC1.75□□□□□ -2.13
MT-ND4P03905 AC103710.2-201ENST00000609912 942 ntBASIC1.75□□□□□ -2.13
MT-ND4P03905 AL627230.6-201ENST00000611129 280 ntBASIC1.75□□□□□ -2.13
MT-ND4P03905 uc_338.12-201ENST00000616344 181 ntBASIC1.75□□□□□ -2.13
MT-ND4P03905 MYCBP2-AS1-209ENST00000631152 412 ntTSL 5 BASIC1.75□□□□□ -2.13
MT-ND4P03905 LINC01002-202ENST00000631412 459 ntTSL 5 BASIC1.75□□□□□ -2.13
MT-ND4P03905 RNU6-511P-201ENST00000363496 107 ntBASIC1.74□□□□□ -2.13
MT-ND4P03905 RNY4P16-201ENST00000364768 94 ntBASIC1.74□□□□□ -2.13
MT-ND4P03905 RNA5SP489-201ENST00000410986 109 ntBASIC1.74□□□□□ -2.13
MT-ND4P03905 USP9YP6-201ENST00000413550 854 ntBASIC1.74□□□□□ -2.13
MT-ND4P03905 AC005062.1-207ENST00000418442 587 ntTSL 3 BASIC1.74□□□□□ -2.13
MT-ND4P03905 AC003685.2-201ENST00000422795 395 ntBASIC1.74□□□□□ -2.13
MT-ND4P03905 AL353777.1-201ENST00000425552 326 ntBASIC1.74□□□□□ -2.13
MT-ND4P03905 AL606662.1-201ENST00000445763 553 ntBASIC1.74□□□□□ -2.13
MT-ND4P03905 PMCHL2-203ENST00000457791 237 ntBASIC1.74□□□□□ -2.13
MT-ND4P03905 CHRM3-AS2-203ENST00000458325 895 ntTSL 2 BASIC1.74□□□□□ -2.13
MT-ND4P03905 AC020699.1-201ENST00000505161 445 ntBASIC1.74□□□□□ -2.13
MT-ND4P03905 LINC02377-202ENST00000505436 523 ntTSL 5 BASIC1.74□□□□□ -2.13
MT-ND4P03905 AC016556.1-201ENST00000510004 935 ntTSL 2 BASIC1.74□□□□□ -2.13
MT-ND4P03905 AC010261.1-201ENST00000514411 457 ntTSL 5 BASIC1.74□□□□□ -2.13
MT-ND4P03905 AC116347.2-201ENST00000514912 523 ntBASIC1.74□□□□□ -2.13
MT-ND4P03905 SNORA25.11-201ENST00000515935 105 ntBASIC1.74□□□□□ -2.13
MT-ND4P03905 MIR892C-201ENST00000516410 77 ntBASIC1.74□□□□□ -2.13
MT-ND4P03905 RNU6-143P-201ENST00000516942 93 ntBASIC1.74□□□□□ -2.13
Retrieved 100 of 98,524 protein–RNA pairs in 126.2 ms