Protein–RNA interactions for Protein: O95983

MBD3, Methyl-CpG-binding domain protein 3, humanhuman

Predictions only

Length 291 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MBD3O95983 AC007671.2-201ENST00000637344 619 ntBASIC2.34□□□□□ -2.03
MBD3O95983 AC103993.1-201ENST00000521500 1584 ntTSL 5 BASIC2.34□□□□□ -2.03
MBD3O95983 AL109809.4-201ENST00000603520 2185 ntBASIC2.33□□□□□ -2.04
MBD3O95983 EBAG9-210ENST00000620557 2186 ntAPPRIS P1 TSL 3 BASIC2.33□□□□□ -2.04
MBD3O95983 AL359854.1-201ENST00000614203 1594 ntBASIC2.33□□□□□ -2.04
MBD3O95983 CCDC30-201ENST00000340612 2664 ntAPPRIS P2 TSL 5 BASIC2.33□□□□□ -2.04
MBD3O95983 COMMD6-201ENST00000355801 486 ntTSL 2 BASIC2.33□□□□□ -2.04
MBD3O95983 RNU6-7-201ENST00000364784 107 ntBASIC2.33□□□□□ -2.04
MBD3O95983 RNU6-8-201ENST00000365467 107 ntBASIC2.33□□□□□ -2.04
MBD3O95983 RNU4ATAC16P-201ENST00000408512 126 ntBASIC2.33□□□□□ -2.04
MBD3O95983 Y_RNA.608-201ENST00000410647 95 ntBASIC2.33□□□□□ -2.04
MBD3O95983 AC104777.3-201ENST00000416350 545 ntTSL 3 BASIC2.33□□□□□ -2.04
MBD3O95983 AC063965.1-201ENST00000416679 499 ntTSL 3 BASIC2.33□□□□□ -2.04
MBD3O95983 LINC01673-201ENST00000426418 468 ntTSL 3 BASIC2.33□□□□□ -2.04
MBD3O95983 AC137499.1-201ENST00000427602 88 ntBASIC2.33□□□□□ -2.04
MBD3O95983 AL033539.1-201ENST00000427775 743 ntTSL 3 BASIC2.33□□□□□ -2.04
MBD3O95983 AL592045.1-201ENST00000429867 352 ntBASIC2.33□□□□□ -2.04
MBD3O95983 LINC00392-201ENST00000430033 557 ntTSL 3 BASIC2.33□□□□□ -2.04
MBD3O95983 AC008568.1-203ENST00000433406 765 ntTSL 3 BASIC2.33□□□□□ -2.04
MBD3O95983 AC025750.2-201ENST00000442609 450 ntBASIC2.33□□□□□ -2.04
MBD3O95983 IFNA11P-201ENST00000446352 526 ntBASIC2.33□□□□□ -2.04
MBD3O95983 LINC00709-201ENST00000458168 494 ntTSL 2 BASIC2.33□□□□□ -2.04
MBD3O95983 RPS3AP14-201ENST00000483907 780 ntBASIC2.33□□□□□ -2.04
MBD3O95983 AC126768.3-201ENST00000514519 560 ntTSL 4 BASIC2.33□□□□□ -2.04
MBD3O95983 AC092747.1-202ENST00000540595 380 ntTSL 5 BASIC2.33□□□□□ -2.04
MBD3O95983 AC092746.1-201ENST00000542819 562 ntTSL 4 BASIC2.33□□□□□ -2.04
MBD3O95983 AL121821.2-201ENST00000556081 394 ntBASIC2.33□□□□□ -2.04
MBD3O95983 LINC00933-203ENST00000559812 219 ntBASIC2.33□□□□□ -2.04
MBD3O95983 CERS3-AS1-201ENST00000560643 372 ntTSL 3 BASIC2.33□□□□□ -2.04
MBD3O95983 ROCK1P1-201ENST00000573767 549 ntBASIC2.33□□□□□ -2.04
MBD3O95983 MIR4782-201ENST00000577987 79 ntBASIC2.33□□□□□ -2.04
MBD3O95983 MIR3199-1-201ENST00000582434 88 ntBASIC2.33□□□□□ -2.04
MBD3O95983 AC099566.1-211ENST00000595188 737 ntTSL 5 BASIC2.33□□□□□ -2.04
MBD3O95983 RNU6-87P-201ENST00000607561 108 ntBASIC2.33□□□□□ -2.04
MBD3O95983 AC138749.5-201ENST00000611461 208 ntBASIC2.33□□□□□ -2.04
MBD3O95983 AC116165.2-201ENST00000616705 206 ntBASIC2.33□□□□□ -2.04
MBD3O95983 AC098657.3-201ENST00000620434 263 ntBASIC2.33□□□□□ -2.04
MBD3O95983 AC023510.2-201ENST00000622162 746 ntBASIC2.33□□□□□ -2.04
MBD3O95983 AC244517.12-201ENST00000623581 663 ntBASIC2.33□□□□□ -2.04
MBD3O95983 hsa-mir-3158-1.1-201ENST00000637571 81 ntBASIC2.33□□□□□ -2.04
MBD3O95983 ACTR6-212ENST00000552376 1659 ntTSL 5 BASIC2.33□□□□□ -2.04
MBD3O95983 Z82209.1-201ENST00000422141 2135 ntBASIC2.33□□□□□ -2.04
MBD3O95983 AL445523.1-201ENST00000451184 1362 ntBASIC2.33□□□□□ -2.04
MBD3O95983 KBTBD3-207ENST00000534815 3396 ntTSL 5 BASIC2.33□□□□□ -2.04
MBD3O95983 AKAP7-209ENST00000541650 2008 ntTSL 5 BASIC2.32□□□□□ -2.04
MBD3O95983 ARHGAP15-202ENST00000409869 2968 ntTSL 5 BASIC2.32□□□□□ -2.04
MBD3O95983 RNY4P16-201ENST00000364768 94 ntBASIC2.32□□□□□ -2.04
MBD3O95983 RNU6-533P-201ENST00000384144 107 ntBASIC2.32□□□□□ -2.04
MBD3O95983 RNU6-809P-201ENST00000384461 107 ntBASIC2.32□□□□□ -2.04
MBD3O95983 RNU2-40P-201ENST00000410833 196 ntBASIC2.32□□□□□ -2.04
MBD3O95983 RNU6-920P-201ENST00000410926 92 ntBASIC2.32□□□□□ -2.04
MBD3O95983 AL162726.4-201ENST00000422010 673 ntTSL 5 BASIC2.32□□□□□ -2.04
MBD3O95983 AL138775.1-201ENST00000429539 575 ntTSL 1 (best) BASIC2.32□□□□□ -2.04
MBD3O95983 AC073174.1-201ENST00000444155 415 ntTSL 5 BASIC2.32□□□□□ -2.04
MBD3O95983 AL441985.1-201ENST00000457727 251 ntBASIC2.32□□□□□ -2.04
MBD3O95983 MTND1P22-201ENST00000510572 951 ntBASIC2.32□□□□□ -2.04
MBD3O95983 AC010186.2-204ENST00000537668 439 ntBASIC2.32□□□□□ -2.04
MBD3O95983 LINC02384-208ENST00000546086 565 ntTSL 3 BASIC2.32□□□□□ -2.04
MBD3O95983 MTND1P24-201ENST00000552175 861 ntBASIC2.32□□□□□ -2.04
MBD3O95983 SNRPGP18-201ENST00000553000 214 ntBASIC2.32□□□□□ -2.04
MBD3O95983 LINC2194-202ENST00000567624 506 ntTSL 3 BASIC2.32□□□□□ -2.04
MBD3O95983 MIR1273C-201ENST00000578669 77 ntBASIC2.32□□□□□ -2.04
MBD3O95983 MIR3167-201ENST00000579623 85 ntBASIC2.32□□□□□ -2.04
MBD3O95983 AC069061.2-202ENST00000580280 357 ntTSL 3 BASIC2.32□□□□□ -2.04
MBD3O95983 AC005357.2-201ENST00000586473 583 ntTSL 2 BASIC2.32□□□□□ -2.04
MBD3O95983 NRBF2P1-201ENST00000587407 859 ntBASIC2.32□□□□□ -2.04
MBD3O95983 AL021997.1-201ENST00000605757 193 ntBASIC2.32□□□□□ -2.04
MBD3O95983 AC069294.1-201ENST00000608397 350 ntBASIC2.32□□□□□ -2.04
MBD3O95983 MIR6840-201ENST00000611937 71 ntBASIC2.32□□□□□ -2.04
MBD3O95983 MIR7106-201ENST00000612419 65 ntBASIC2.32□□□□□ -2.04
MBD3O95983 AC104010.1-201ENST00000616889 150 ntBASIC2.32□□□□□ -2.04
MBD3O95983 GPR171-203ENST00000617554 960 ntAPPRIS P1 BASIC2.32□□□□□ -2.04
MBD3O95983 AC006386.2-201ENST00000624491 75 ntBASIC2.32□□□□□ -2.04
MBD3O95983 AC012005.1-201ENST00000624575 75 ntBASIC2.32□□□□□ -2.04
MBD3O95983 LMBRD1-201ENST00000370570 2099 ntTSL 1 (best) BASIC2.32□□□□□ -2.04
MBD3O95983 CGGBP1-202ENST00000398392 5298 ntAPPRIS P1 BASIC2.32□□□□□ -2.04
MBD3O95983 ZNF451-208ENST00000491832 3632 ntAPPRIS ALT2 TSL 1 (best) BASIC2.31□□□□□ -2.04
MBD3O95983 TBC1D15-210ENST00000485960 2489 ntAPPRIS P1 TSL 1 (best) BASIC2.31□□□□□ -2.04
MBD3O95983 AL596028.1-201ENST00000326971 197 ntBASIC2.31□□□□□ -2.04
MBD3O95983 RNU6-486P-201ENST00000363116 107 ntBASIC2.31□□□□□ -2.04
MBD3O95983 Z98749.2-208ENST00000381646 500 ntBASIC2.31□□□□□ -2.04
MBD3O95983 MIR218-1-201ENST00000384999 110 ntBASIC2.31□□□□□ -2.04
MBD3O95983 MIR524-201ENST00000385242 87 ntBASIC2.31□□□□□ -2.04
MBD3O95983 TRDJ3-201ENST00000390476 59 ntAPPRIS P1 BASIC2.31□□□□□ -2.04
MBD3O95983 RNA5SP489-201ENST00000410986 109 ntBASIC2.31□□□□□ -2.04
MBD3O95983 Z99497.1-201ENST00000421282 135 ntBASIC2.31□□□□□ -2.04
MBD3O95983 AL109947.1-201ENST00000423747 382 ntTSL 2 BASIC2.31□□□□□ -2.04
MBD3O95983 RPS3AP44-201ENST00000425466 790 ntBASIC2.31□□□□□ -2.04
MBD3O95983 TRIM60P10Y-201ENST00000425589 751 ntBASIC2.31□□□□□ -2.04
MBD3O95983 UBE2E2-AS1-202ENST00000430018 499 ntTSL 2 BASIC2.31□□□□□ -2.04
MBD3O95983 AL157937.1-201ENST00000435092 443 ntTSL 3 BASIC2.31□□□□□ -2.04
MBD3O95983 AL136369.1-201ENST00000437825 244 ntTSL 5 BASIC2.31□□□□□ -2.04
MBD3O95983 MTND5P2-201ENST00000442927 1142 ntBASIC2.31□□□□□ -2.04
MBD3O95983 SSXP1-201ENST00000453640 473 ntBASIC2.31□□□□□ -2.04
MBD3O95983 AC079943.2-201ENST00000488999 716 ntTSL 3 BASIC2.31□□□□□ -2.04
MBD3O95983 LINC02110-201ENST00000503870 546 ntTSL 3 BASIC2.31□□□□□ -2.04
MBD3O95983 AC109927.2-201ENST00000506416 303 ntBASIC2.31□□□□□ -2.04
MBD3O95983 RNA5SP112-201ENST00000515937 99 ntBASIC2.31□□□□□ -2.04
MBD3O95983 RNU6-1129P-201ENST00000515964 104 ntBASIC2.31□□□□□ -2.04
MBD3O95983 RNU6-914P-201ENST00000516749 109 ntBASIC2.31□□□□□ -2.04
Retrieved 100 of 98,524 protein–RNA pairs in 102 ms