Protein–RNA interactions for Protein: O60506

SYNCRIP, Heterogeneous nuclear ribonucleoprotein Q, humanhuman

Known RBP Predictions only

Length 623 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SYNCRIPO60506 UBE2V1P8-201ENST00000437166 265 ntBASIC3.05□□□□□ -1.92
SYNCRIPO60506 UQCRHP3-201ENST00000451503 251 ntBASIC3.05□□□□□ -1.92
SYNCRIPO60506 LINC00430-201ENST00000457672 597 ntTSL 3 BASIC3.05□□□□□ -1.92
SYNCRIPO60506 AC126389.1-201ENST00000477436 290 ntBASIC3.05□□□□□ -1.92
SYNCRIPO60506 RN7SL432P-201ENST00000484057 298 ntBASIC3.05□□□□□ -1.92
SYNCRIPO60506 AC079382.1-201ENST00000493346 557 ntBASIC3.05□□□□□ -1.92
SYNCRIPO60506 AC009646.1-201ENST00000510455 318 ntBASIC3.05□□□□□ -1.92
SYNCRIPO60506 LINC00824-201ENST00000517583 805 ntTSL 5 BASIC3.05□□□□□ -1.92
SYNCRIPO60506 AC104211.1-202ENST00000521307 866 ntTSL 3 BASIC3.05□□□□□ -1.92
SYNCRIPO60506 HTN3-202ENST00000526767 578 ntAPPRIS P2 TSL 1 (best) BASIC3.05□□□□□ -1.92
SYNCRIPO60506 AC096558.2-201ENST00000546678 506 ntTSL 3 BASIC3.05□□□□□ -1.92
SYNCRIPO60506 AL391261.3-201ENST00000557194 520 ntBASIC3.05□□□□□ -1.92
SYNCRIPO60506 HMGB1P33-201ENST00000563485 527 ntBASIC3.05□□□□□ -1.92
SYNCRIPO60506 MTATP6P3-201ENST00000581686 676 ntBASIC3.05□□□□□ -1.92
SYNCRIPO60506 MSMB-202ENST00000582163 488 ntAPPRIS P1 TSL 1 (best) BASIC3.05□□□□□ -1.92
SYNCRIPO60506 LINC01905-202ENST00000588139 459 ntTSL 3 BASIC3.05□□□□□ -1.92
SYNCRIPO60506 AC025449.1-201ENST00000603896 529 ntBASIC3.05□□□□□ -1.92
SYNCRIPO60506 C9orf153-205ENST00000617985 333 ntAPPRIS ALT2 TSL 5 BASIC3.05□□□□□ -1.92
SYNCRIPO60506 PTP4A2-219ENST00000626355 606 ntTSL 5 BASIC3.05□□□□□ -1.92
SYNCRIPO60506 MS4A14-202ENST00000395001 3401 ntTSL 5 BASIC3.05□□□□□ -1.92
SYNCRIPO60506 CHD9-203ENST00000447540 11509 ntTSL 5 BASIC3.04□□□□□ -1.92
SYNCRIPO60506 MTND5P17-201ENST00000418405 1603 ntBASIC3.04□□□□□ -1.92
SYNCRIPO60506 MGAT4C-210ENST00000620241 3194 ntAPPRIS P1 TSL 2 BASIC3.04□□□□□ -1.92
SYNCRIPO60506 CACNB4-238ENST00000636901 7706 ntTSL 5 BASIC3.04□□□□□ -1.92
SYNCRIPO60506 Y_RNA.367-201ENST00000365544 101 ntBASIC3.04□□□□□ -1.92
SYNCRIPO60506 RNU6-456P-201ENST00000384493 107 ntBASIC3.04□□□□□ -1.92
SYNCRIPO60506 AC073311.1-201ENST00000420146 505 ntTSL 5 BASIC3.04□□□□□ -1.92
SYNCRIPO60506 AL139413.1-201ENST00000421309 217 ntBASIC3.04□□□□□ -1.92
SYNCRIPO60506 AC009414.1-201ENST00000427200 443 ntBASIC3.04□□□□□ -1.92
SYNCRIPO60506 HMGB1P27-201ENST00000431429 603 ntBASIC3.04□□□□□ -1.92
SYNCRIPO60506 RPL23AP30-201ENST00000432419 501 ntBASIC3.04□□□□□ -1.92
SYNCRIPO60506 RPS15AP9-201ENST00000439856 381 ntBASIC3.04□□□□□ -1.92
SYNCRIPO60506 AC004691.1-201ENST00000440376 547 ntTSL 3 BASIC3.04□□□□□ -1.92
SYNCRIPO60506 AC069549.1-201ENST00000451584 499 ntTSL 3 BASIC3.04□□□□□ -1.92
SYNCRIPO60506 AL356010.1-201ENST00000456364 102 ntBASIC3.04□□□□□ -1.92
SYNCRIPO60506 AC114786.4-201ENST00000508771 728 ntBASIC3.04□□□□□ -1.92
SYNCRIPO60506 AF213884.2-201ENST00000510417 903 ntBASIC3.04□□□□□ -1.92
SYNCRIPO60506 Y_RNA.693-201ENST00000516641 110 ntBASIC3.04□□□□□ -1.92
SYNCRIPO60506 HMGB1P41-201ENST00000520234 440 ntBASIC3.04□□□□□ -1.92
SYNCRIPO60506 AP006587.4-201ENST00000526053 529 ntBASIC3.04□□□□□ -1.92
SYNCRIPO60506 SNHG1-210ENST00000539303 240 ntTSL 3 BASIC3.04□□□□□ -1.92
SYNCRIPO60506 AL157687.1-201ENST00000554853 619 ntBASIC3.04□□□□□ -1.92
SYNCRIPO60506 AC044798.1-201ENST00000565146 418 ntTSL 5 BASIC3.04□□□□□ -1.92
SYNCRIPO60506 PWRN1-205ENST00000565295 465 ntTSL 3 BASIC3.04□□□□□ -1.92
SYNCRIPO60506 LINC01482-203ENST00000589610 468 ntTSL 3 BASIC3.04□□□□□ -1.92
SYNCRIPO60506 AC174048.1-201ENST00000603389 144 ntBASIC3.04□□□□□ -1.92
SYNCRIPO60506 AL355877.2-201ENST00000603670 358 ntBASIC3.04□□□□□ -1.92
SYNCRIPO60506 AC007363.1-201ENST00000604736 620 ntBASIC3.04□□□□□ -1.92
SYNCRIPO60506 MTND4LP5-201ENST00000605152 292 ntBASIC3.04□□□□□ -1.92
SYNCRIPO60506 CDKN2B-AS.1-201ENST00000617921 150 ntBASIC3.04□□□□□ -1.92
SYNCRIPO60506 RGS22-214ENST00000523287 4033 ntAPPRIS ALT2 TSL 2 BASIC3.03□□□□□ -1.92
SYNCRIPO60506 MUM1L1-203ENST00000372552 3957 ntAPPRIS P1 TSL 5 BASIC3.03□□□□□ -1.92
SYNCRIPO60506 ZNF66-201ENST00000344519 1745 ntAPPRIS P1 TSL 3 BASIC3.03□□□□□ -1.92
SYNCRIPO60506 IKZF2-213ENST00000457361 9350 ntTSL 5 BASIC3.03□□□□□ -1.92
SYNCRIPO60506 RNU6-1167P-201ENST00000363227 94 ntBASIC3.03□□□□□ -1.92
SYNCRIPO60506 RNU6-884P-201ENST00000363889 107 ntBASIC3.03□□□□□ -1.92
SYNCRIPO60506 SNORA51.4-201ENST00000364993 124 ntBASIC3.03□□□□□ -1.92
SYNCRIPO60506 SMIM11P1-201ENST00000369586 178 ntBASIC3.03□□□□□ -1.92
SYNCRIPO60506 Y_RNA.481-201ENST00000384373 102 ntBASIC3.03□□□□□ -1.92
SYNCRIPO60506 RNU6-851P-201ENST00000384565 107 ntBASIC3.03□□□□□ -1.92
SYNCRIPO60506 MIR888-201ENST00000401186 77 ntBASIC3.03□□□□□ -1.92
SYNCRIPO60506 MIR548F1-201ENST00000408667 84 ntBASIC3.03□□□□□ -1.92
SYNCRIPO60506 RNU2-39P-201ENST00000410604 198 ntBASIC3.03□□□□□ -1.92
SYNCRIPO60506 RN7SKP123-201ENST00000410732 291 ntBASIC3.03□□□□□ -1.92
SYNCRIPO60506 LINC01707-201ENST00000425517 627 ntTSL 3 BASIC3.03□□□□□ -1.92
SYNCRIPO60506 AL358075.3-201ENST00000426289 226 ntBASIC3.03□□□□□ -1.92
SYNCRIPO60506 AL135923.2-201ENST00000435444 501 ntTSL 2 BASIC3.03□□□□□ -1.92
SYNCRIPO60506 RPS12P18-201ENST00000442381 270 ntBASIC3.03□□□□□ -1.92
SYNCRIPO60506 AC099566.1-201ENST00000442558 479 ntTSL 3 BASIC3.03□□□□□ -1.92
SYNCRIPO60506 AC104688.1-201ENST00000447158 419 ntTSL 3 BASIC3.03□□□□□ -1.92
SYNCRIPO60506 RPS15AP27-201ENST00000449183 343 ntBASIC3.03□□□□□ -1.92
SYNCRIPO60506 AL358075.2-201ENST00000452785 339 ntTSL 2 BASIC3.03□□□□□ -1.92
SYNCRIPO60506 C1orf112-206ENST00000472795 925 ntAPPRIS ALT2 TSL 2 BASIC3.03□□□□□ -1.92
SYNCRIPO60506 AC117440.1-201ENST00000474107 571 ntBASIC3.03□□□□□ -1.92
SYNCRIPO60506 AC099520.1-202ENST00000503650 777 ntTSL 3 BASIC3.03□□□□□ -1.92
SYNCRIPO60506 AC004053.1-201ENST00000515127 575 ntTSL 5 BASIC3.03□□□□□ -1.92
SYNCRIPO60506 AC093206.1-201ENST00000515364 497 ntTSL 3 BASIC3.03□□□□□ -1.92
SYNCRIPO60506 RNA5SP367-201ENST00000516557 118 ntBASIC3.03□□□□□ -1.92
SYNCRIPO60506 RNU6-314P-201ENST00000516574 104 ntBASIC3.03□□□□□ -1.92
SYNCRIPO60506 LINCR-0001-203ENST00000524047 545 ntTSL 4 BASIC3.03□□□□□ -1.92
SYNCRIPO60506 OR5AQ1P-201ENST00000527596 927 ntBASIC3.03□□□□□ -1.92
SYNCRIPO60506 AC104383.1-201ENST00000530297 370 ntBASIC3.03□□□□□ -1.92
SYNCRIPO60506 AL355076.2-202ENST00000553754 574 ntTSL 4 BASIC3.03□□□□□ -1.92
SYNCRIPO60506 GNG2-205ENST00000554736 569 ntAPPRIS P1 TSL 4 BASIC3.03□□□□□ -1.92
SYNCRIPO60506 LINC02253-201ENST00000559321 448 ntTSL 2 BASIC3.03□□□□□ -1.92
SYNCRIPO60506 AC074052.2-201ENST00000562516 214 ntTSL 3 BASIC3.03□□□□□ -1.92
SYNCRIPO60506 AC024619.4-201ENST00000580924 316 ntBASIC3.03□□□□□ -1.92
SYNCRIPO60506 ELOCP29-201ENST00000588193 334 ntBASIC3.03□□□□□ -1.92
SYNCRIPO60506 AC012507.3-201ENST00000603556 477 ntBASIC3.03□□□□□ -1.92
SYNCRIPO60506 AC019159.1-201ENST00000605094 187 ntBASIC3.03□□□□□ -1.92
SYNCRIPO60506 AL033523.1-201ENST00000605153 153 ntBASIC3.03□□□□□ -1.92
SYNCRIPO60506 AL121992.2-201ENST00000606262 256 ntBASIC3.03□□□□□ -1.92
SYNCRIPO60506 AC068944.2-201ENST00000610373 403 ntBASIC3.03□□□□□ -1.92
SYNCRIPO60506 C4orf22-209ENST00000621014 228 ntTSL 3 BASIC3.03□□□□□ -1.92
SYNCRIPO60506 GMFB-208ENST00000554908 6721 ntTSL 1 (best) BASIC3.03□□□□□ -1.92
SYNCRIPO60506 ZNF479-202ENST00000331162 2072 ntAPPRIS P1 TSL 1 (best) BASIC3.03□□□□□ -1.92
SYNCRIPO60506 AL589740.1-207ENST00000607823 1962 ntTSL 5 BASIC3.03□□□□□ -1.92
SYNCRIPO60506 TRIQK-204ENST00000517858 1882 ntTSL 3 BASIC3.03□□□□□ -1.93
SYNCRIPO60506 ZCCHC10-201ENST00000324170 2178 ntAPPRIS P3 TSL 1 (best) BASIC3.02□□□□□ -1.93
SYNCRIPO60506 SCN1A-219ENST00000641575 12874 ntAPPRIS ALT1 BASIC3.02□□□□□ -1.93
Retrieved 100 of 98,524 protein–RNA pairs in 144.5 ms