Protein–RNA interactions for Protein: O60232

SSSCA1, Sjoegren syndrome/scleroderma autoantigen 1, humanhuman

Predictions only

Length 199 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SSSCA1O60232 AP003128.1-201ENST00000531414 448 ntTSL 2 BASIC0.62□□□□□ -2.31
SSSCA1O60232 BBIP1P1-201ENST00000602999 279 ntBASIC0.62□□□□□ -2.31
SSSCA1O60232 AC242628.1-201ENST00000606810 391 ntBASIC0.62□□□□□ -2.31
SSSCA1O60232 AC112250.2-201ENST00000609450 491 ntTSL 3 BASIC0.62□□□□□ -2.31
SSSCA1O60232 AC024257.5-201ENST00000612739 531 ntBASIC0.62□□□□□ -2.31
SSSCA1O60232 AC008121.3-201ENST00000618726 433 ntBASIC0.62□□□□□ -2.31
SSSCA1O60232 USP12-203ENST00000620323 349 ntTSL 3 BASIC0.62□□□□□ -2.31
SSSCA1O60232 RNU6-878P-201ENST00000384578 110 ntBASIC0.61□□□□□ -2.31
SSSCA1O60232 CCDC58P2-201ENST00000417131 366 ntBASIC0.61□□□□□ -2.31
SSSCA1O60232 CR848007.2-201ENST00000424918 787 ntBASIC0.61□□□□□ -2.31
SSSCA1O60232 AC093423.2-201ENST00000429074 437 ntTSL 3 BASIC0.61□□□□□ -2.31
SSSCA1O60232 AL591806.2-201ENST00000433122 173 ntBASIC0.61□□□□□ -2.31
SSSCA1O60232 MTND5P15-201ENST00000434246 349 ntBASIC0.61□□□□□ -2.31
SSSCA1O60232 PTGES3P1-201ENST00000439531 483 ntBASIC0.61□□□□□ -2.31
SSSCA1O60232 LEKR1-206ENST00000483177 546 ntTSL 3 BASIC0.61□□□□□ -2.31
SSSCA1O60232 AP001025.1-201ENST00000486139 332 ntBASIC0.61□□□□□ -2.31
SSSCA1O60232 AL137804.1-201ENST00000528872 576 ntTSL 3 BASIC0.61□□□□□ -2.31
SSSCA1O60232 ZNF84-205ENST00000535439 647 ntTSL 5 BASIC0.61□□□□□ -2.31
SSSCA1O60232 OR6C68-201ENST00000548615 939 ntAPPRIS P1 BASIC0.61□□□□□ -2.31
SSSCA1O60232 AC115989.2-201ENST00000578640 563 ntBASIC0.61□□□□□ -2.31
SSSCA1O60232 VN1R88P-201ENST00000596787 292 ntBASIC0.61□□□□□ -2.31
SSSCA1O60232 AC073544.2-201ENST00000601155 540 ntBASIC0.61□□□□□ -2.31
SSSCA1O60232 AC008945.2-201ENST00000606056 604 ntBASIC0.61□□□□□ -2.31
SSSCA1O60232 AL020996.3-201ENST00000606617 222 ntBASIC0.61□□□□□ -2.31
SSSCA1O60232 AF129408.1-201ENST00000608767 431 ntBASIC0.61□□□□□ -2.31
SSSCA1O60232 AC091965.5-201ENST00000624785 342 ntBASIC0.61□□□□□ -2.31
SSSCA1O60232 SLC25A46-206ENST00000509432 1596 ntTSL 2 BASIC0.61□□□□□ -2.31
SSSCA1O60232 AL138713.1-201ENST00000624026 2130 ntBASIC0.61□□□□□ -2.31
SSSCA1O60232 CCDC148-202ENST00000409187 2523 ntAPPRIS P1 TSL 5 BASIC0.61□□□□□ -2.31
SSSCA1O60232 COMMD8-201ENST00000381571 1469 ntAPPRIS P1 TSL 1 (best) BASIC0.61□□□□□ -2.31
SSSCA1O60232 RNU6-778P-201ENST00000363269 103 ntBASIC0.6□□□□□ -2.31
SSSCA1O60232 TXNDC8-202ENST00000374510 455 ntAPPRIS P2 TSL 1 (best) BASIC0.6□□□□□ -2.31
SSSCA1O60232 LINC00428-201ENST00000415620 227 ntTSL 5 BASIC0.6□□□□□ -2.31
SSSCA1O60232 USP9YP26-201ENST00000421008 661 ntBASIC0.6□□□□□ -2.31
SSSCA1O60232 LINC02238-201ENST00000424953 557 ntTSL 5 BASIC0.6□□□□□ -2.31
SSSCA1O60232 CST2P1-201ENST00000425770 87 ntBASIC0.6□□□□□ -2.31
SSSCA1O60232 USP9YP18-201ENST00000425912 695 ntBASIC0.6□□□□□ -2.31
SSSCA1O60232 PTGES3P4-201ENST00000426243 356 ntBASIC0.6□□□□□ -2.31
SSSCA1O60232 AC108667.1-201ENST00000428618 249 ntBASIC0.6□□□□□ -2.31
SSSCA1O60232 RPL7P34-201ENST00000433316 712 ntBASIC0.6□□□□□ -2.31
SSSCA1O60232 UBE2V2P3-201ENST00000433562 437 ntBASIC0.6□□□□□ -2.31
SSSCA1O60232 USP9YP17-201ENST00000444617 696 ntBASIC0.6□□□□□ -2.31
SSSCA1O60232 AC108729.1-201ENST00000487812 947 ntBASIC0.6□□□□□ -2.31
SSSCA1O60232 ARL2BPP4-201ENST00000506854 471 ntBASIC0.6□□□□□ -2.31
SSSCA1O60232 ACA64.5-201ENST00000516207 127 ntBASIC0.6□□□□□ -2.31
SSSCA1O60232 AC100807.1-201ENST00000517640 552 ntTSL 5 BASIC0.6□□□□□ -2.31
SSSCA1O60232 AC090124.1-201ENST00000525097 448 ntTSL 3 BASIC0.6□□□□□ -2.31
SSSCA1O60232 COPS8P3-201ENST00000526024 482 ntBASIC0.6□□□□□ -2.31
SSSCA1O60232 AC068205.1-204ENST00000532989 481 ntTSL 3 BASIC0.6□□□□□ -2.31
SSSCA1O60232 AC005951.2-201ENST00000576282 495 ntBASIC0.6□□□□□ -2.31
SSSCA1O60232 AC090771.2-201ENST00000588794 571 ntTSL 3 BASIC0.6□□□□□ -2.31
SSSCA1O60232 MIR7515HG-243ENST00000591400 1067 ntTSL 5 BASIC0.6□□□□□ -2.31
SSSCA1O60232 AL020997.3-201ENST00000602843 359 ntBASIC0.6□□□□□ -2.31
SSSCA1O60232 DUXAP11-201ENST00000603858 526 ntBASIC0.6□□□□□ -2.31
SSSCA1O60232 NDUFA8P1-201ENST00000605525 367 ntBASIC0.6□□□□□ -2.31
SSSCA1O60232 AC012360.2-201ENST00000609349 391 ntBASIC0.6□□□□□ -2.31
SSSCA1O60232 AC107075.1-201ENST00000613695 314 ntBASIC0.6□□□□□ -2.31
SSSCA1O60232 AC073569.3-201ENST00000619055 682 ntBASIC0.6□□□□□ -2.31
SSSCA1O60232 AC023490.1-202ENST00000620909 820 ntTSL 5 BASIC0.6□□□□□ -2.31
SSSCA1O60232 MIR8063-201ENST00000621930 81 ntBASIC0.6□□□□□ -2.31
SSSCA1O60232 AC104820.1-201ENST00000624183 307 ntBASIC0.6□□□□□ -2.31
SSSCA1O60232 AL353651.2-201ENST00000635706 559 ntTSL 5 BASIC0.6□□□□□ -2.31
SSSCA1O60232 U2.21-201ENST00000637295 81 ntBASIC0.6□□□□□ -2.31
SSSCA1O60232 TRAPPC13-204ENST00000438419 1437 ntAPPRIS P4 TSL 1 (best) BASIC0.59□□□□□ -2.31
SSSCA1O60232 HSBP1P2-201ENST00000299671 229 ntBASIC0.59□□□□□ -2.31
SSSCA1O60232 RNU1-22P-201ENST00000363334 158 ntBASIC0.59□□□□□ -2.31
SSSCA1O60232 CRISP3-203ENST00000371159 872 ntAPPRIS ALT2 TSL 5 BASIC0.59□□□□□ -2.31
SSSCA1O60232 RNU6-1032P-201ENST00000384100 107 ntBASIC0.59□□□□□ -2.31
SSSCA1O60232 MIR100-201ENST00000385259 80 ntBASIC0.59□□□□□ -2.31
SSSCA1O60232 AC010967.1-201ENST00000421575 489 ntTSL 5 BASIC0.59□□□□□ -2.31
SSSCA1O60232 AL353706.1-201ENST00000436728 494 ntBASIC0.59□□□□□ -2.31
SSSCA1O60232 SNRPEP9-201ENST00000436794 238 ntBASIC0.59□□□□□ -2.31
SSSCA1O60232 MTCO1P44-201ENST00000441935 243 ntBASIC0.59□□□□□ -2.31
SSSCA1O60232 TMEM247-203ENST00000449601 741 ntTSL 1 (best) BASIC0.59□□□□□ -2.31
SSSCA1O60232 RPS20P20-201ENST00000460498 340 ntBASIC0.59□□□□□ -2.31
SSSCA1O60232 AC079140.2-201ENST00000506193 142 ntBASIC0.59□□□□□ -2.31
SSSCA1O60232 AC111194.2-201ENST00000511222 455 ntTSL 5 BASIC0.59□□□□□ -2.31
SSSCA1O60232 SNORA31.17-201ENST00000516953 127 ntBASIC0.59□□□□□ -2.31
SSSCA1O60232 AC103853.2-201ENST00000519805 716 ntTSL 3 BASIC0.59□□□□□ -2.31
SSSCA1O60232 TRAV1-1-201ENST00000542354 392 ntAPPRIS P1 BASIC0.59□□□□□ -2.31
SSSCA1O60232 AC012378.1-201ENST00000561155 364 ntTSL 3 BASIC0.59□□□□□ -2.31
SSSCA1O60232 LINC00557-201ENST00000563184 1279 ntBASIC0.59□□□□□ -2.31
SSSCA1O60232 ADAM3B-201ENST00000569937 840 ntBASIC0.59□□□□□ -2.31
SSSCA1O60232 AC012213.3-201ENST00000577199 777 ntBASIC0.59□□□□□ -2.31
SSSCA1O60232 AC011933.3-201ENST00000578226 372 ntTSL 1 (best) BASIC0.59□□□□□ -2.31
SSSCA1O60232 MIR3945-201ENST00000581853 98 ntBASIC0.59□□□□□ -2.31
SSSCA1O60232 VN1R80P-201ENST00000597126 338 ntBASIC0.59□□□□□ -2.31
SSSCA1O60232 AP001172.2-201ENST00000602454 467 ntTSL 5 BASIC0.59□□□□□ -2.31
SSSCA1O60232 AC097468.3-201ENST00000607956 456 ntBASIC0.59□□□□□ -2.31
SSSCA1O60232 AC091895.1-201ENST00000624494 256 ntBASIC0.59□□□□□ -2.31
SSSCA1O60232 AC017037.3-201ENST00000625016 472 ntBASIC0.59□□□□□ -2.31
SSSCA1O60232 AC008163.1-202ENST00000636004 2889 ntBASIC0.59□□□□□ -2.32
SSSCA1O60232 KTN1-214ENST00000554507 2057 ntTSL 1 (best) BASIC0.58□□□□□ -2.32
SSSCA1O60232 CTDSPL2-202ENST00000558373 4255 ntTSL 1 (best) BASIC0.58□□□□□ -2.32
SSSCA1O60232 IL36B-202ENST00000327407 1052 ntAPPRIS P1 TSL 1 (best) BASIC0.58□□□□□ -2.32
SSSCA1O60232 RNU1-58P-201ENST00000362413 163 ntBASIC0.58□□□□□ -2.32
SSSCA1O60232 SNORD1A-201ENST00000364968 72 ntBASIC0.58□□□□□ -2.32
SSSCA1O60232 SNORD14D-201ENST00000384390 87 ntBASIC0.58□□□□□ -2.32
SSSCA1O60232 SNORA48.1-201ENST00000390879 135 ntBASIC0.58□□□□□ -2.32
SSSCA1O60232 MIR1261-201ENST00000408659 82 ntBASIC0.58□□□□□ -2.32
Retrieved 100 of 98,524 protein–RNA pairs in 118.8 ms