Protein–RNA interactions for Protein: O43364

HOXA2, Homeobox protein Hox-A2, humanhuman

Predictions only

Length 376 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HOXA2O43364 SLC38A2-209ENST00000551374 2802 ntTSL 2 BASIC5.35□□□□□ -1.55
HOXA2O43364 KLHL13-203ENST00000371878 3234 ntTSL 2 BASIC5.35□□□□□ -1.55
HOXA2O43364 VWC2L-202ENST00000427124 4480 ntTSL 1 (best) BASIC5.35□□□□□ -1.55
HOXA2O43364 SNCA-213ENST00000618500 3022 ntTSL 1 (best) BASIC5.34□□□□□ -1.55
HOXA2O43364 APAF1-205ENST00000547045 3744 ntAPPRIS ALT1 TSL 1 (best) BASIC5.34□□□□□ -1.55
HOXA2O43364 BX088651.2-201ENST00000425493 3614 ntTSL 2 BASIC5.34□□□□□ -1.55
HOXA2O43364 OR10D3-202ENST00000641351 3561 ntAPPRIS P1 BASIC5.34□□□□□ -1.55
HOXA2O43364 CSMD3-204ENST00000455883 12485 ntTSL 1 (best) BASIC5.34□□□□□ -1.55
HOXA2O43364 UBXN7-201ENST00000296328 10568 ntAPPRIS P1 TSL 1 (best) BASIC5.34□□□□□ -1.55
HOXA2O43364 ZNF415-201ENST00000243643 2270 ntAPPRIS P3 TSL 1 (best) BASIC5.34□□□□□ -1.55
HOXA2O43364 MOXD1-201ENST00000336749 2950 ntTSL 1 (best) BASIC5.34□□□□□ -1.55
HOXA2O43364 RNA5SP191-201ENST00000362585 102 ntBASIC5.34□□□□□ -1.55
HOXA2O43364 RNU5F-3P-201ENST00000363767 117 ntBASIC5.34□□□□□ -1.55
HOXA2O43364 RNU4-84P-201ENST00000364200 139 ntBASIC5.34□□□□□ -1.55
HOXA2O43364 Y_RNA.238-201ENST00000364441 102 ntBASIC5.34□□□□□ -1.55
HOXA2O43364 SNORD32A-201ENST00000364805 84 ntBASIC5.34□□□□□ -1.55
HOXA2O43364 AL035079.1-201ENST00000405210 287 ntBASIC5.34□□□□□ -1.55
HOXA2O43364 AL590609.3-201ENST00000411815 210 ntTSL 3 BASIC5.34□□□□□ -1.55
HOXA2O43364 AC092017.2-201ENST00000427600 362 ntBASIC5.34□□□□□ -1.55
HOXA2O43364 AC068287.1-201ENST00000430283 295 ntBASIC5.34□□□□□ -1.55
HOXA2O43364 Z82210.1-201ENST00000440037 231 ntBASIC5.34□□□□□ -1.55
HOXA2O43364 AC069023.1-201ENST00000442231 221 ntTSL 3 BASIC5.34□□□□□ -1.55
HOXA2O43364 AL442638.1-201ENST00000443359 237 ntTSL 5 BASIC5.34□□□□□ -1.55
HOXA2O43364 AC022795.1-201ENST00000473808 480 ntBASIC5.34□□□□□ -1.55
HOXA2O43364 RPS27AP9-201ENST00000477681 438 ntBASIC5.34□□□□□ -1.55
HOXA2O43364 RN7SL459P-201ENST00000481078 302 ntBASIC5.34□□□□□ -1.55
HOXA2O43364 SNORD116-25-201ENST00000516517 92 ntBASIC5.34□□□□□ -1.55
HOXA2O43364 AP003400.1-201ENST00000528319 231 ntTSL 5 BASIC5.34□□□□□ -1.55
HOXA2O43364 AP001880.2-201ENST00000538233 448 ntBASIC5.34□□□□□ -1.55
HOXA2O43364 AC104002.1-201ENST00000557025 380 ntTSL 3 BASIC5.34□□□□□ -1.55
HOXA2O43364 LINC00933-203ENST00000559812 219 ntBASIC5.34□□□□□ -1.55
HOXA2O43364 CYCSP39-201ENST00000565821 309 ntBASIC5.34□□□□□ -1.55
HOXA2O43364 MIR4697-201ENST00000582977 78 ntBASIC5.34□□□□□ -1.55
HOXA2O43364 AC136601.2-201ENST00000604356 474 ntBASIC5.34□□□□□ -1.55
HOXA2O43364 TTC28-AS1_2.1-201ENST00000611117 157 ntBASIC5.34□□□□□ -1.55
HOXA2O43364 AL160287.1-202ENST00000638113 454 ntTSL 5 BASIC5.34□□□□□ -1.55
HOXA2O43364 BMPR2-201ENST00000374574 9683 ntTSL 2 BASIC5.34□□□□□ -1.55
HOXA2O43364 AC063976.2-201ENST00000425667 3556 ntBASIC5.34□□□□□ -1.55
HOXA2O43364 MYBPC1-206ENST00000541119 3533 ntAPPRIS ALT2 TSL 1 (best) BASIC5.34□□□□□ -1.55
HOXA2O43364 ZNF705E-201ENST00000525199 3442 ntAPPRIS P1 TSL 2 BASIC5.34□□□□□ -1.55
HOXA2O43364 AK9-201ENST00000285397 2566 ntTSL 1 (best) BASIC5.34□□□□□ -1.55
HOXA2O43364 RWDD2B-207ENST00000493196 3094 ntAPPRIS P1 TSL 1 (best) BASIC5.34□□□□□ -1.56
HOXA2O43364 DAZ1-205ENST00000540248 3268 ntTSL 5 BASIC5.33□□□□□ -1.56
HOXA2O43364 PCDH15-227ENST00000614895 9249 ntAPPRIS ALT2 TSL 5 BASIC5.33□□□□□ -1.56
HOXA2O43364 RNU4-80P-201ENST00000363200 141 ntBASIC5.33□□□□□ -1.56
HOXA2O43364 SNORD115-8-201ENST00000363856 82 ntBASIC5.33□□□□□ -1.56
HOXA2O43364 RNU6-335P-201ENST00000364563 113 ntBASIC5.33□□□□□ -1.56
HOXA2O43364 SNORD115-38-201ENST00000365037 82 ntBASIC5.33□□□□□ -1.56
HOXA2O43364 SNORD20-201ENST00000384550 80 ntBASIC5.33□□□□□ -1.56
HOXA2O43364 AL358075.3-201ENST00000426289 226 ntBASIC5.33□□□□□ -1.56
HOXA2O43364 AL133268.3-201ENST00000428903 577 ntTSL 5 BASIC5.33□□□□□ -1.56
HOXA2O43364 SRI-210ENST00000490437 570 ntTSL 2 BASIC5.33□□□□□ -1.56
HOXA2O43364 RNU6-191P-201ENST00000516295 94 ntBASIC5.33□□□□□ -1.56
HOXA2O43364 RNU6-1183P-201ENST00000517054 60 ntBASIC5.33□□□□□ -1.56
HOXA2O43364 AC016885.2-201ENST00000522598 261 ntTSL 3 BASIC5.33□□□□□ -1.56
HOXA2O43364 MIR4284-201ENST00000578924 81 ntBASIC5.33□□□□□ -1.56
HOXA2O43364 AC007952.9-201ENST00000584365 191 ntTSL 3 BASIC5.33□□□□□ -1.56
HOXA2O43364 AC008745.1-201ENST00000604064 271 ntBASIC5.33□□□□□ -1.56
HOXA2O43364 Y_RNA.778-201ENST00000620203 90 ntBASIC5.33□□□□□ -1.56
HOXA2O43364 AC048347.1-201ENST00000624621 427 ntBASIC5.33□□□□□ -1.56
HOXA2O43364 SNORA43.4-201ENST00000629559 138 ntBASIC5.33□□□□□ -1.56
HOXA2O43364 SPTY2D1-AS1-204ENST00000634992 373 ntAPPRIS P5 TSL 5 BASIC5.33□□□□□ -1.56
HOXA2O43364 GUCY1A3-201ENST00000296518 4400 ntAPPRIS P1 TSL 1 (best) BASIC5.33□□□□□ -1.56
HOXA2O43364 TFPI-201ENST00000233156 3885 ntAPPRIS P1 TSL 1 (best) BASIC5.33□□□□□ -1.56
HOXA2O43364 CLCA1-201ENST00000234701 3310 ntAPPRIS P1 TSL 1 (best) BASIC5.33□□□□□ -1.56
HOXA2O43364 FZD6-205ENST00000522566 3719 ntAPPRIS P1 TSL 1 (best) BASIC5.33□□□□□ -1.56
HOXA2O43364 RTKN2-201ENST00000315289 2383 ntTSL 2 BASIC5.33□□□□□ -1.56
HOXA2O43364 LINC01277-201ENST00000419957 2398 ntTSL 2 BASIC5.33□□□□□ -1.56
HOXA2O43364 FAM197Y9-201ENST00000451062 2332 ntTSL 5 BASIC5.32□□□□□ -1.56
HOXA2O43364 ZNF845-201ENST00000458035 4311 ntAPPRIS P1 TSL 4 BASIC5.32□□□□□ -1.56
HOXA2O43364 AC104260.2-201ENST00000623551 3497 ntBASIC5.32□□□□□ -1.56
HOXA2O43364 AP001605.1-201ENST00000420186 2603 ntTSL 1 (best) BASIC5.32□□□□□ -1.56
HOXA2O43364 OR9G4-203ENST00000641581 2603 ntAPPRIS P1 BASIC5.32□□□□□ -1.56
HOXA2O43364 OR9G4-204ENST00000641668 2608 ntAPPRIS P1 BASIC5.32□□□□□ -1.56
HOXA2O43364 CEP295-206ENST00000531700 2890 ntAPPRIS ALT2 TSL 2 BASIC5.32□□□□□ -1.56
HOXA2O43364 PTPRD-205ENST00000397611 8242 ntTSL 5 BASIC5.32□□□□□ -1.56
HOXA2O43364 MTRR-202ENST00000440940 3215 ntAPPRIS P1 TSL 1 (best) BASIC5.32□□□□□ -1.56
HOXA2O43364 Y_RNA.75-201ENST00000362927 97 ntBASIC5.32□□□□□ -1.56
HOXA2O43364 Y_RNA.412-201ENST00000384001 104 ntBASIC5.32□□□□□ -1.56
HOXA2O43364 RNU2-2P-201ENST00000410396 191 ntBASIC5.32□□□□□ -1.56
HOXA2O43364 BX276092.6-201ENST00000430476 250 ntBASIC5.32□□□□□ -1.56
HOXA2O43364 AL512844.2-201ENST00000433990 593 ntBASIC5.32□□□□□ -1.56
HOXA2O43364 SEPT7P4-201ENST00000437076 306 ntBASIC5.32□□□□□ -1.56
HOXA2O43364 GPM6BP3-201ENST00000442797 145 ntBASIC5.32□□□□□ -1.56
HOXA2O43364 BX276092.8-201ENST00000455722 250 ntBASIC5.32□□□□□ -1.56
HOXA2O43364 RN7SL354P-201ENST00000469282 294 ntBASIC5.32□□□□□ -1.56
HOXA2O43364 KRTAP5-14P-201ENST00000502328 121 ntBASIC5.32□□□□□ -1.56
HOXA2O43364 AC020593.1-201ENST00000507399 299 ntBASIC5.32□□□□□ -1.56
HOXA2O43364 AC092747.1-202ENST00000540595 380 ntTSL 5 BASIC5.32□□□□□ -1.56
HOXA2O43364 TGIF1P1-201ENST00000558095 802 ntBASIC5.32□□□□□ -1.56
HOXA2O43364 AC009120.5-201ENST00000561669 475 ntTSL 5 BASIC5.32□□□□□ -1.56
HOXA2O43364 AC004148.1-201ENST00000571506 398 ntTSL 5 BASIC5.32□□□□□ -1.56
HOXA2O43364 RN7SL690P-201ENST00000582087 240 ntBASIC5.32□□□□□ -1.56
HOXA2O43364 MIR5096-201ENST00000583713 70 ntBASIC5.32□□□□□ -1.56
HOXA2O43364 RNU2-4P-201ENST00000606190 192 ntBASIC5.32□□□□□ -1.56
HOXA2O43364 U2.15-201ENST00000611544 191 ntBASIC5.32□□□□□ -1.56
HOXA2O43364 U2.16-201ENST00000613119 191 ntBASIC5.32□□□□□ -1.56
HOXA2O43364 U2.12-201ENST00000613778 191 ntBASIC5.32□□□□□ -1.56
HOXA2O43364 U2.9-201ENST00000615427 191 ntBASIC5.32□□□□□ -1.56
HOXA2O43364 U2.11-201ENST00000616345 191 ntBASIC5.32□□□□□ -1.56
Retrieved 100 of 98,524 protein–RNA pairs in 111 ms