Protein–RNA interactions for Protein: O15347

HMGB3, High mobility group protein B3, humanhuman

Known RBP Predictions only

Length 200 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB3O15347 AL670379.1-201ENST00000604752 252 ntBASIC1.13□□□□□ -2.23
HMGB3O15347 AL670379.2-201ENST00000604983 252 ntBASIC1.13□□□□□ -2.23
HMGB3O15347 AL670379.5-201ENST00000605253 252 ntBASIC1.13□□□□□ -2.23
HMGB3O15347 AL670379.4-201ENST00000605279 254 ntBASIC1.13□□□□□ -2.23
HMGB3O15347 AL670379.12-201ENST00000605291 253 ntBASIC1.13□□□□□ -2.23
HMGB3O15347 AL670379.8-201ENST00000605353 252 ntBASIC1.13□□□□□ -2.23
HMGB3O15347 AL670379.9-201ENST00000605428 253 ntBASIC1.13□□□□□ -2.23
HMGB3O15347 AL670379.7-201ENST00000605823 252 ntBASIC1.13□□□□□ -2.23
HMGB3O15347 AC087045.1-201ENST00000605856 382 ntBASIC1.13□□□□□ -2.23
HMGB3O15347 AC091965.1-202ENST00000607662 397 ntTSL 3 BASIC1.13□□□□□ -2.23
HMGB3O15347 AC034229.4-201ENST00000607861 441 ntBASIC1.13□□□□□ -2.23
HMGB3O15347 AC002543.1-201ENST00000299783 1954 ntBASIC1.13□□□□□ -2.23
HMGB3O15347 AC107982.1-201ENST00000507171 1300 ntBASIC1.13□□□□□ -2.23
HMGB3O15347 RMDN2-203ENST00000402091 1973 ntTSL 2 BASIC1.12□□□□□ -2.23
HMGB3O15347 SNORD115-3-201ENST00000363100 82 ntBASIC1.12□□□□□ -2.23
HMGB3O15347 RNU6-1032P-201ENST00000384100 107 ntBASIC1.12□□□□□ -2.23
HMGB3O15347 DPRXP1-201ENST00000426312 460 ntBASIC1.12□□□□□ -2.23
HMGB3O15347 AL359878.2-201ENST00000435531 407 ntTSL 3 BASIC1.12□□□□□ -2.23
HMGB3O15347 SNRPGP13-201ENST00000442212 177 ntBASIC1.12□□□□□ -2.23
HMGB3O15347 AC044781.1-201ENST00000446193 570 ntTSL 3 BASIC1.12□□□□□ -2.23
HMGB3O15347 AL034345.2-203ENST00000453417 383 ntTSL 3 BASIC1.12□□□□□ -2.23
HMGB3O15347 HYDIN2-201ENST00000493714 554 ntTSL 4 BASIC1.12□□□□□ -2.23
HMGB3O15347 AC116655.1-201ENST00000508324 901 ntBASIC1.12□□□□□ -2.23
HMGB3O15347 SNORA48.9-201ENST00000516419 162 ntBASIC1.12□□□□□ -2.23
HMGB3O15347 RNU6-1183P-201ENST00000517054 60 ntBASIC1.12□□□□□ -2.23
HMGB3O15347 AC011377.1-201ENST00000517708 275 ntTSL 3 BASIC1.12□□□□□ -2.23
HMGB3O15347 PPP1R42-212ENST00000522909 1282 ntAPPRIS ALT2 TSL 5 BASIC1.12□□□□□ -2.23
HMGB3O15347 LINC01495-201ENST00000532380 421 ntTSL 2 BASIC1.12□□□□□ -2.23
HMGB3O15347 LINC02384-205ENST00000539404 785 ntTSL 3 BASIC1.12□□□□□ -2.23
HMGB3O15347 AC092747.1-202ENST00000540595 380 ntTSL 5 BASIC1.12□□□□□ -2.23
HMGB3O15347 G2E3-AS1-202ENST00000550118 609 ntTSL 5 BASIC1.12□□□□□ -2.23
HMGB3O15347 MIR4672-201ENST00000583126 81 ntBASIC1.12□□□□□ -2.23
HMGB3O15347 AL157938.2-201ENST00000587264 894 ntTSL 5 BASIC1.12□□□□□ -2.23
HMGB3O15347 AC013470.4-201ENST00000619978 986 ntBASIC1.12□□□□□ -2.23
HMGB3O15347 AC013470.2-206ENST00000636804 771 ntAPPRIS P5 TSL 5 BASIC1.12□□□□□ -2.23
HMGB3O15347 SAGE1-201ENST00000324447 2952 ntAPPRIS P2 TSL 5 BASIC1.12□□□□□ -2.23
HMGB3O15347 HFM1-201ENST00000370425 4931 ntAPPRIS P1 TSL 1 (best) BASIC1.12□□□□□ -2.23
HMGB3O15347 BRCA1-202ENST00000354071 4497 ntTSL 1 (best) BASIC1.12□□□□□ -2.23
HMGB3O15347 SLC10A5P1-201ENST00000379063 1306 ntBASIC1.12□□□□□ -2.23
HMGB3O15347 COMMD8-201ENST00000381571 1469 ntAPPRIS P1 TSL 1 (best) BASIC1.12□□□□□ -2.23
HMGB3O15347 CUL3-203ENST00000409096 2701 ntTSL 1 (best) BASIC1.11□□□□□ -2.23
HMGB3O15347 MIR26B-201ENST00000362251 77 ntBASIC1.11□□□□□ -2.23
HMGB3O15347 RNU6-661P-201ENST00000362409 107 ntBASIC1.11□□□□□ -2.23
HMGB3O15347 RNU6-1207P-201ENST00000384343 107 ntBASIC1.11□□□□□ -2.23
HMGB3O15347 MIR518D-201ENST00000385014 87 ntBASIC1.11□□□□□ -2.23
HMGB3O15347 SNORD65.1-201ENST00000390889 71 ntBASIC1.11□□□□□ -2.23
HMGB3O15347 SNORA67.6-201ENST00000391093 99 ntBASIC1.11□□□□□ -2.23
HMGB3O15347 RNU6-952P-201ENST00000391164 108 ntBASIC1.11□□□□□ -2.23
HMGB3O15347 RNU1-78P-201ENST00000391248 165 ntBASIC1.11□□□□□ -2.23
HMGB3O15347 LINC01934-201ENST00000414750 391 ntTSL 3 BASIC1.11□□□□□ -2.23
HMGB3O15347 OR51A5P-201ENST00000415429 942 ntBASIC1.11□□□□□ -2.23
HMGB3O15347 TOMM22P2-201ENST00000430735 237 ntBASIC1.11□□□□□ -2.23
HMGB3O15347 AL139118.1-201ENST00000432707 446 ntTSL 3 BASIC1.11□□□□□ -2.23
HMGB3O15347 GTF2IP3-201ENST00000433887 494 ntBASIC1.11□□□□□ -2.23
HMGB3O15347 AP001043.2-201ENST00000434589 288 ntTSL 3 BASIC1.11□□□□□ -2.23
HMGB3O15347 AL354941.1-201ENST00000438600 464 ntBASIC1.11□□□□□ -2.23
HMGB3O15347 AL008723.1-201ENST00000452181 590 ntTSL 5 BASIC1.11□□□□□ -2.23
HMGB3O15347 CHRM3-AS2-203ENST00000458325 895 ntTSL 2 BASIC1.11□□□□□ -2.23
HMGB3O15347 AC099513.1-201ENST00000490423 301 ntBASIC1.11□□□□□ -2.23
HMGB3O15347 RPS15AP36-201ENST00000492022 382 ntBASIC1.11□□□□□ -2.23
HMGB3O15347 AC139453.3-201ENST00000493276 369 ntBASIC1.11□□□□□ -2.23
HMGB3O15347 MTCYBP35-201ENST00000503630 1137 ntBASIC1.11□□□□□ -2.23
HMGB3O15347 IGLVVI-22-1-201ENST00000521183 211 ntBASIC1.11□□□□□ -2.23
HMGB3O15347 AC005832.3-201ENST00000537929 631 ntBASIC1.11□□□□□ -2.23
HMGB3O15347 HIGD1AP17-201ENST00000554576 276 ntBASIC1.11□□□□□ -2.23
HMGB3O15347 AC122134.1-202ENST00000569111 1201 ntBASIC1.11□□□□□ -2.23
HMGB3O15347 MIR4422-201ENST00000581938 83 ntBASIC1.11□□□□□ -2.23
HMGB3O15347 AC009318.2-201ENST00000610917 651 ntBASIC1.11□□□□□ -2.23
HMGB3O15347 GABRA2-209ENST00000510861 3411 ntAPPRIS P1 TSL 5 BASIC1.11□□□□□ -2.23
HMGB3O15347 PCF11-AS1-201ENST00000602322 1516 ntBASIC1.1□□□□□ -2.23
HMGB3O15347 Y_RNA.67-201ENST00000362870 100 ntBASIC1.1□□□□□ -2.23
HMGB3O15347 RNU6-188P-201ENST00000364207 107 ntBASIC1.1□□□□□ -2.23
HMGB3O15347 RNU6-1164P-201ENST00000364428 107 ntBASIC1.1□□□□□ -2.23
HMGB3O15347 OR51A4-201ENST00000380373 1002 ntAPPRIS P1 BASIC1.1□□□□□ -2.23
HMGB3O15347 RNU6-432P-201ENST00000384196 109 ntBASIC1.1□□□□□ -2.23
HMGB3O15347 MIR597-201ENST00000384968 97 ntBASIC1.1□□□□□ -2.23
HMGB3O15347 UBE2V1P15-201ENST00000407776 448 ntBASIC1.1□□□□□ -2.23
HMGB3O15347 RNU2-36P-201ENST00000410361 191 ntBASIC1.1□□□□□ -2.23
HMGB3O15347 RN7SKP284-201ENST00000411002 343 ntBASIC1.1□□□□□ -2.23
HMGB3O15347 AL158840.1-201ENST00000414132 523 ntTSL 3 BASIC1.1□□□□□ -2.23
HMGB3O15347 AL358453.1-201ENST00000422522 250 ntBASIC1.1□□□□□ -2.23
HMGB3O15347 MTCO2P20-201ENST00000437339 673 ntBASIC1.1□□□□□ -2.23
HMGB3O15347 AC245102.2-201ENST00000448956 180 ntBASIC1.1□□□□□ -2.23
HMGB3O15347 AL590365.1-201ENST00000450788 243 ntBASIC1.1□□□□□ -2.23
HMGB3O15347 LINC01069-201ENST00000452933 546 ntTSL 5 BASIC1.1□□□□□ -2.23
HMGB3O15347 AC112492.4-201ENST00000456549 352 ntBASIC1.1□□□□□ -2.23
HMGB3O15347 AC008379.1-201ENST00000463655 464 ntBASIC1.1□□□□□ -2.23
HMGB3O15347 AL627309.4-201ENST00000496488 457 ntTSL 5 BASIC1.1□□□□□ -2.23
HMGB3O15347 AC082650.1-201ENST00000503542 575 ntTSL 4 BASIC1.1□□□□□ -2.23
HMGB3O15347 MSMO1-203ENST00000504317 1026 ntTSL 1 (best) BASIC1.1□□□□□ -2.23
HMGB3O15347 LINC02484-202ENST00000514877 546 ntTSL 3 BASIC1.1□□□□□ -2.23
HMGB3O15347 SNORA25.15-201ENST00000516487 89 ntBASIC1.1□□□□□ -2.23
HMGB3O15347 COPS8P3-201ENST00000526024 482 ntBASIC1.1□□□□□ -2.23
HMGB3O15347 AL355076.2-202ENST00000553754 574 ntTSL 4 BASIC1.1□□□□□ -2.23
HMGB3O15347 AC015720.1-201ENST00000565251 277 ntBASIC1.1□□□□□ -2.23
HMGB3O15347 MIR4648-201ENST00000580107 72 ntBASIC1.1□□□□□ -2.23
HMGB3O15347 AC069061.2-202ENST00000580280 357 ntTSL 3 BASIC1.1□□□□□ -2.23
HMGB3O15347 LINC02109-204ENST00000602801 563 ntTSL 4 BASIC1.1□□□□□ -2.23
HMGB3O15347 RMST_6.1-201ENST00000611980 203 ntBASIC1.1□□□□□ -2.23
HMGB3O15347 AC068506.1-202ENST00000613388 545 ntTSL 3 BASIC1.1□□□□□ -2.23
Retrieved 100 of 98,524 protein–RNA pairs in 112.6 ms