Protein–RNA interactions for Protein: H3BT56

CHKB-CPT1B, CHKB-CPT1B readthrough (NMD candidate) (Fragment), humanhuman

Predictions only

Length 60 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHKB-CPT1BH3BT56 MTCO2P2-201ENST00000591258 225 ntBASIC0.43□□□□□ -2.34
CHKB-CPT1BH3BT56 CLIC4P2-201ENST00000601934 717 ntBASIC0.43□□□□□ -2.34
CHKB-CPT1BH3BT56 AP000860.1-201ENST00000605250 559 ntBASIC0.43□□□□□ -2.34
CHKB-CPT1BH3BT56 MIR6078-201ENST00000611069 100 ntBASIC0.43□□□□□ -2.34
CHKB-CPT1BH3BT56 VN1R9P-201ENST00000614184 867 ntBASIC0.43□□□□□ -2.34
CHKB-CPT1BH3BT56 AL132822.1-201ENST00000617063 513 ntBASIC0.43□□□□□ -2.34
CHKB-CPT1BH3BT56 AL590808.1-201ENST00000618696 141 ntBASIC0.43□□□□□ -2.34
CHKB-CPT1BH3BT56 AC138627.2-201ENST00000624202 601 ntBASIC0.43□□□□□ -2.34
CHKB-CPT1BH3BT56 AC079416.3-201ENST00000624479 549 ntBASIC0.43□□□□□ -2.34
CHKB-CPT1BH3BT56 COMMD8-201ENST00000381571 1469 ntAPPRIS P1 TSL 1 (best) BASIC0.42□□□□□ -2.34
CHKB-CPT1BH3BT56 ZGRF1-202ENST00000309071 3347 ntTSL 1 (best) BASIC0.42□□□□□ -2.34
CHKB-CPT1BH3BT56 ZNF849P-201ENST00000594711 1566 ntBASIC0.42□□□□□ -2.34
CHKB-CPT1BH3BT56 CTDSPL2-202ENST00000558373 4255 ntTSL 1 (best) BASIC0.42□□□□□ -2.34
CHKB-CPT1BH3BT56 RNU6-115P-201ENST00000364310 107 ntBASIC0.42□□□□□ -2.34
CHKB-CPT1BH3BT56 FAM206A-202ENST00000374624 499 ntTSL 3 BASIC0.42□□□□□ -2.34
CHKB-CPT1BH3BT56 SNORA3.2-201ENST00000408221 125 ntBASIC0.42□□□□□ -2.34
CHKB-CPT1BH3BT56 LINC00301-202ENST00000412599 772 ntTSL 1 (best) BASIC0.42□□□□□ -2.34
CHKB-CPT1BH3BT56 AC004965.1-201ENST00000413033 213 ntBASIC0.42□□□□□ -2.34
CHKB-CPT1BH3BT56 SRIP3-201ENST00000413200 219 ntBASIC0.42□□□□□ -2.34
CHKB-CPT1BH3BT56 AL035407.1-201ENST00000429211 571 ntBASIC0.42□□□□□ -2.34
CHKB-CPT1BH3BT56 AL606490.8-201ENST00000441624 319 ntBASIC0.42□□□□□ -2.34
CHKB-CPT1BH3BT56 AC009474.2-201ENST00000451383 136 ntBASIC0.42□□□□□ -2.34
CHKB-CPT1BH3BT56 AL441985.1-201ENST00000457727 251 ntBASIC0.42□□□□□ -2.34
CHKB-CPT1BH3BT56 AC112771.1-201ENST00000463581 102 ntBASIC0.42□□□□□ -2.34
CHKB-CPT1BH3BT56 AC011005.2-201ENST00000487324 359 ntBASIC0.42□□□□□ -2.34
CHKB-CPT1BH3BT56 AL160314.1-201ENST00000490836 438 ntBASIC0.42□□□□□ -2.34
CHKB-CPT1BH3BT56 HYDIN2-201ENST00000493714 554 ntTSL 4 BASIC0.42□□□□□ -2.34
CHKB-CPT1BH3BT56 AC099520.1-202ENST00000503650 777 ntTSL 3 BASIC0.42□□□□□ -2.34
CHKB-CPT1BH3BT56 AC117522.2-201ENST00000510049 657 ntBASIC0.42□□□□□ -2.34
CHKB-CPT1BH3BT56 AC010261.1-201ENST00000514411 457 ntTSL 5 BASIC0.42□□□□□ -2.34
CHKB-CPT1BH3BT56 RNU6-322P-201ENST00000516010 103 ntBASIC0.42□□□□□ -2.34
CHKB-CPT1BH3BT56 RNU6-351P-201ENST00000516097 100 ntBASIC0.42□□□□□ -2.34
CHKB-CPT1BH3BT56 AC104997.1-201ENST00000519761 717 ntBASIC0.42□□□□□ -2.34
CHKB-CPT1BH3BT56 AC107882.1-201ENST00000530837 477 ntTSL 3 BASIC0.42□□□□□ -2.34
CHKB-CPT1BH3BT56 AC007450.1-201ENST00000536492 188 ntTSL 3 BASIC0.42□□□□□ -2.34
CHKB-CPT1BH3BT56 RBM7-208ENST00000545678 867 ntTSL 3 BASIC0.42□□□□□ -2.34
CHKB-CPT1BH3BT56 AC068993.2-201ENST00000546563 395 ntTSL 5 BASIC0.42□□□□□ -2.34
CHKB-CPT1BH3BT56 AL512310.1-201ENST00000548639 172 ntBASIC0.42□□□□□ -2.34
CHKB-CPT1BH3BT56 AC067805.1-201ENST00000559344 470 ntBASIC0.42□□□□□ -2.34
CHKB-CPT1BH3BT56 MIR3937-201ENST00000580135 106 ntBASIC0.42□□□□□ -2.34
CHKB-CPT1BH3BT56 AC008088.1-201ENST00000580993 280 ntBASIC0.42□□□□□ -2.34
CHKB-CPT1BH3BT56 AC004160.1-210ENST00000599875 689 ntTSL 5 BASIC0.42□□□□□ -2.34
CHKB-CPT1BH3BT56 AC021171.1-201ENST00000603137 706 ntBASIC0.42□□□□□ -2.34
CHKB-CPT1BH3BT56 AL022345.2-201ENST00000606307 135 ntBASIC0.42□□□□□ -2.34
CHKB-CPT1BH3BT56 BX284668.6-201ENST00000606899 438 ntBASIC0.42□□□□□ -2.34
CHKB-CPT1BH3BT56 AC112250.2-201ENST00000609450 491 ntTSL 3 BASIC0.42□□□□□ -2.34
CHKB-CPT1BH3BT56 AC009318.2-201ENST00000610917 651 ntBASIC0.42□□□□□ -2.34
CHKB-CPT1BH3BT56 MIR8065-201ENST00000620577 100 ntBASIC0.42□□□□□ -2.34
CHKB-CPT1BH3BT56 AL159972.1-201ENST00000625150 448 ntBASIC0.42□□□□□ -2.34
CHKB-CPT1BH3BT56 ATM-228ENST00000639240 498 ntTSL 5 BASIC0.42□□□□□ -2.34
CHKB-CPT1BH3BT56 ATM-230ENST00000640388 578 ntTSL 5 BASIC0.42□□□□□ -2.34
CHKB-CPT1BH3BT56 AC119674.1-220ENST00000641502 1048 ntBASIC0.42□□□□□ -2.34
CHKB-CPT1BH3BT56 PLOD2-204ENST00000461497 3043 ntTSL 2 BASIC0.41□□□□□ -2.34
CHKB-CPT1BH3BT56 RNU5E-8P-201ENST00000363502 116 ntBASIC0.41□□□□□ -2.34
CHKB-CPT1BH3BT56 MIR491-201ENST00000384877 84 ntBASIC0.41□□□□□ -2.34
CHKB-CPT1BH3BT56 USP9YP33-201ENST00000412220 421 ntBASIC0.41□□□□□ -2.34
CHKB-CPT1BH3BT56 AL109924.3-201ENST00000413324 393 ntTSL 2 BASIC0.41□□□□□ -2.34
CHKB-CPT1BH3BT56 SNRPG-202ENST00000413456 398 ntTSL 3 BASIC0.41□□□□□ -2.34
CHKB-CPT1BH3BT56 AC104653.2-201ENST00000435407 416 ntTSL 3 BASIC0.41□□□□□ -2.34
CHKB-CPT1BH3BT56 RPS27P1-201ENST00000450552 247 ntBASIC0.41□□□□□ -2.34
CHKB-CPT1BH3BT56 HMGN2P18-201ENST00000450680 270 ntBASIC0.41□□□□□ -2.34
CHKB-CPT1BH3BT56 AC117394.2-201ENST00000487827 323 ntTSL 3 BASIC0.41□□□□□ -2.34
CHKB-CPT1BH3BT56 AC084024.2-201ENST00000503480 791 ntBASIC0.41□□□□□ -2.34
CHKB-CPT1BH3BT56 CTD-2350J17.1-201ENST00000509228 362 ntTSL 2 BASIC0.41□□□□□ -2.34
CHKB-CPT1BH3BT56 AC010486.1-201ENST00000511793 424 ntBASIC0.41□□□□□ -2.34
CHKB-CPT1BH3BT56 LINC02382-201ENST00000515840 614 ntTSL 1 (best) BASIC0.41□□□□□ -2.34
CHKB-CPT1BH3BT56 RNU6-416P-201ENST00000516265 103 ntBASIC0.41□□□□□ -2.34
CHKB-CPT1BH3BT56 RNU6-197P-201ENST00000516680 100 ntBASIC0.41□□□□□ -2.34
CHKB-CPT1BH3BT56 AC019176.1-201ENST00000518519 225 ntBASIC0.41□□□□□ -2.34
CHKB-CPT1BH3BT56 AC109329.1-201ENST00000518744 317 ntBASIC0.41□□□□□ -2.34
CHKB-CPT1BH3BT56 AC023200.1-201ENST00000519660 651 ntTSL 3 BASIC0.41□□□□□ -2.34
CHKB-CPT1BH3BT56 MTCO2P15-201ENST00000532655 656 ntBASIC0.41□□□□□ -2.34
CHKB-CPT1BH3BT56 AC008127.2-201ENST00000549925 1075 ntBASIC0.41□□□□□ -2.34
CHKB-CPT1BH3BT56 AC012146.1-204ENST00000570712 426 ntTSL 3 BASIC0.41□□□□□ -2.34
CHKB-CPT1BH3BT56 MIR4421-201ENST00000578133 69 ntBASIC0.41□□□□□ -2.34
CHKB-CPT1BH3BT56 AC087045.1-201ENST00000605856 382 ntBASIC0.41□□□□□ -2.34
CHKB-CPT1BH3BT56 AL583856.2-201ENST00000606298 543 ntBASIC0.41□□□□□ -2.34
CHKB-CPT1BH3BT56 CENPF-206ENST00000614578 528 ntTSL 5 BASIC0.41□□□□□ -2.34
CHKB-CPT1BH3BT56 AL157834.3-201ENST00000615543 103 ntBASIC0.41□□□□□ -2.34
CHKB-CPT1BH3BT56 AC009033.1-201ENST00000624279 431 ntBASIC0.41□□□□□ -2.34
CHKB-CPT1BH3BT56 AC091895.1-201ENST00000624494 256 ntBASIC0.41□□□□□ -2.34
CHKB-CPT1BH3BT56 GMFB-210ENST00000628554 639 ntTSL 4 BASIC0.41□□□□□ -2.34
CHKB-CPT1BH3BT56 C1orf141-202ENST00000371006 2053 ntAPPRIS P3 TSL 2 BASIC0.41□□□□□ -2.34
CHKB-CPT1BH3BT56 CEP290-201ENST00000309041 7616 ntAPPRIS ALT1 TSL 5 BASIC0.4□□□□□ -2.34
CHKB-CPT1BH3BT56 SNORA4.1-201ENST00000364263 144 ntBASIC0.4□□□□□ -2.35
CHKB-CPT1BH3BT56 AC051618.1-201ENST00000414295 207 ntTSL 3 BASIC0.4□□□□□ -2.35
CHKB-CPT1BH3BT56 AL451054.2-201ENST00000420896 202 ntBASIC0.4□□□□□ -2.35
CHKB-CPT1BH3BT56 AC007435.1-201ENST00000421086 415 ntBASIC0.4□□□□□ -2.35
CHKB-CPT1BH3BT56 HMGB1P27-201ENST00000431429 603 ntBASIC0.4□□□□□ -2.35
CHKB-CPT1BH3BT56 OR2AQ1P-201ENST00000451972 200 ntBASIC0.4□□□□□ -2.35
CHKB-CPT1BH3BT56 LINC00374-201ENST00000454780 800 ntTSL 3 BASIC0.4□□□□□ -2.35
CHKB-CPT1BH3BT56 SNORD13-201ENST00000459299 104 ntBASIC0.4□□□□□ -2.35
CHKB-CPT1BH3BT56 AC010255.2-201ENST00000505209 428 ntTSL 3 BASIC0.4□□□□□ -2.35
CHKB-CPT1BH3BT56 RNU6-528P-201ENST00000516926 100 ntBASIC0.4□□□□□ -2.35
CHKB-CPT1BH3BT56 RNU6-586P-201ENST00000517265 104 ntBASIC0.4□□□□□ -2.35
CHKB-CPT1BH3BT56 CBX3P8-201ENST00000532412 525 ntBASIC0.4□□□□□ -2.35
CHKB-CPT1BH3BT56 KLRF1-203ENST00000537723 598 ntTSL 1 (best) BASIC0.4□□□□□ -2.35
CHKB-CPT1BH3BT56 AC093025.1-201ENST00000547795 569 ntTSL 2 BASIC0.4□□□□□ -2.35
CHKB-CPT1BH3BT56 AC084879.2-201ENST00000551656 369 ntTSL 3 BASIC0.4□□□□□ -2.35
CHKB-CPT1BH3BT56 AL118556.1-201ENST00000555257 502 ntTSL 2 BASIC0.4□□□□□ -2.35
Retrieved 100 of 98,524 protein–RNA pairs in 125.2 ms