Protein–RNA interactions for Protein: A0A0B4J268

TRAV4, T-cell receptor alpha variable 4 (Fragment), humanhuman

Predictions only

Length 109 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRAV4A0A0B4J268 Y_RNA.675-201ENST00000516389 149 ntBASIC1.12□□□□□ -2.23
TRAV4A0A0B4J268 SNORA48.9-201ENST00000516419 162 ntBASIC1.12□□□□□ -2.23
TRAV4A0A0B4J268 RNU6-678P-201ENST00000516832 109 ntBASIC1.12□□□□□ -2.23
TRAV4A0A0B4J268 AC011257.1-201ENST00000519048 281 ntTSL 3 BASIC1.12□□□□□ -2.23
TRAV4A0A0B4J268 CYCSP27-201ENST00000527643 293 ntBASIC1.12□□□□□ -2.23
TRAV4A0A0B4J268 AP000873.5-201ENST00000533906 236 ntBASIC1.12□□□□□ -2.23
TRAV4A0A0B4J268 AC123905.1-201ENST00000552098 541 ntTSL 4 BASIC1.12□□□□□ -2.23
TRAV4A0A0B4J268 AL118556.1-201ENST00000555257 502 ntTSL 2 BASIC1.12□□□□□ -2.23
TRAV4A0A0B4J268 AC005774.1-201ENST00000565247 567 ntTSL 4 BASIC1.12□□□□□ -2.23
TRAV4A0A0B4J268 LINC01919-202ENST00000579506 384 ntTSL 3 BASIC1.12□□□□□ -2.23
TRAV4A0A0B4J268 AC068025.2-201ENST00000584958 419 ntTSL 5 BASIC1.12□□□□□ -2.23
TRAV4A0A0B4J268 AL353997.4-201ENST00000586196 166 ntBASIC1.12□□□□□ -2.23
TRAV4A0A0B4J268 BBIP1P1-201ENST00000602999 279 ntBASIC1.12□□□□□ -2.23
TRAV4A0A0B4J268 KTN1-214ENST00000554507 2057 ntTSL 1 (best) BASIC1.12□□□□□ -2.23
TRAV4A0A0B4J268 SKIL-202ENST00000413427 2702 ntTSL 1 (best) BASIC1.12□□□□□ -2.23
TRAV4A0A0B4J268 BRDT-206ENST00000402388 3125 ntAPPRIS P3 TSL 1 (best) BASIC1.12□□□□□ -2.23
TRAV4A0A0B4J268 HSFY1P1-202ENST00000425038 1381 ntTSL 1 (best) BASIC1.11□□□□□ -2.23
TRAV4A0A0B4J268 CDC27P3-201ENST00000635418 1910 ntBASIC1.11□□□□□ -2.23
TRAV4A0A0B4J268 MT-ND4L-201ENST00000361335 297 ntAPPRIS P1 BASIC1.11□□□□□ -2.23
TRAV4A0A0B4J268 RNU6-343P-201ENST00000364709 104 ntBASIC1.11□□□□□ -2.23
TRAV4A0A0B4J268 MIR504-201ENST00000385065 83 ntBASIC1.11□□□□□ -2.23
TRAV4A0A0B4J268 BTF3L4P2-201ENST00000392798 346 ntBASIC1.11□□□□□ -2.23
TRAV4A0A0B4J268 LINC00301-202ENST00000412599 772 ntTSL 1 (best) BASIC1.11□□□□□ -2.23
TRAV4A0A0B4J268 LINC01934-201ENST00000414750 391 ntTSL 3 BASIC1.11□□□□□ -2.23
TRAV4A0A0B4J268 AC073311.1-201ENST00000420146 505 ntTSL 5 BASIC1.11□□□□□ -2.23
TRAV4A0A0B4J268 OOSP1P1-201ENST00000423265 274 ntBASIC1.11□□□□□ -2.23
TRAV4A0A0B4J268 MTCO3P46-201ENST00000425787 232 ntBASIC1.11□□□□□ -2.23
TRAV4A0A0B4J268 SDAD1P3-201ENST00000427380 333 ntBASIC1.11□□□□□ -2.23
TRAV4A0A0B4J268 AC244035.1-201ENST00000430042 390 ntBASIC1.11□□□□□ -2.23
TRAV4A0A0B4J268 AC092839.1-201ENST00000433475 536 ntTSL 4 BASIC1.11□□□□□ -2.23
TRAV4A0A0B4J268 AP001043.2-201ENST00000434589 288 ntTSL 3 BASIC1.11□□□□□ -2.23
TRAV4A0A0B4J268 HMGB1P18-201ENST00000438801 619 ntBASIC1.11□□□□□ -2.23
TRAV4A0A0B4J268 AL390067.1-201ENST00000440009 420 ntTSL 3 BASIC1.11□□□□□ -2.23
TRAV4A0A0B4J268 AL161937.1-201ENST00000444478 425 ntTSL 3 BASIC1.11□□□□□ -2.23
TRAV4A0A0B4J268 ITGA9-AS1-208ENST00000449586 726 ntTSL 3 BASIC1.11□□□□□ -2.23
TRAV4A0A0B4J268 SSXP1-201ENST00000453640 473 ntBASIC1.11□□□□□ -2.23
TRAV4A0A0B4J268 AC112492.4-201ENST00000456549 352 ntBASIC1.11□□□□□ -2.23
TRAV4A0A0B4J268 snoU13.15-201ENST00000459407 104 ntBASIC1.11□□□□□ -2.23
TRAV4A0A0B4J268 OARD1-209ENST00000471367 401 ntTSL 2 BASIC1.11□□□□□ -2.23
TRAV4A0A0B4J268 LINC02276-201ENST00000508388 138 ntTSL 3 BASIC1.11□□□□□ -2.23
TRAV4A0A0B4J268 AC097478.1-204ENST00000509723 547 ntTSL 3 BASIC1.11□□□□□ -2.23
TRAV4A0A0B4J268 RNU5B-3P-201ENST00000516601 115 ntBASIC1.11□□□□□ -2.23
TRAV4A0A0B4J268 AC022784.5-201ENST00000522241 437 ntBASIC1.11□□□□□ -2.23
TRAV4A0A0B4J268 AP000753.2-201ENST00000540307 423 ntTSL 3 BASIC1.11□□□□□ -2.23
TRAV4A0A0B4J268 ARL2BPP2-201ENST00000550907 489 ntBASIC1.11□□□□□ -2.23
TRAV4A0A0B4J268 AL355076.2-202ENST00000553754 574 ntTSL 4 BASIC1.11□□□□□ -2.23
TRAV4A0A0B4J268 HIGD1AP17-201ENST00000554576 276 ntBASIC1.11□□□□□ -2.23
TRAV4A0A0B4J268 AL160236.1-201ENST00000556317 195 ntBASIC1.11□□□□□ -2.23
TRAV4A0A0B4J268 AC005154.1-222ENST00000579024 341 ntTSL 5 BASIC1.11□□□□□ -2.23
TRAV4A0A0B4J268 MIR3683-201ENST00000580847 82 ntBASIC1.11□□□□□ -2.23
TRAV4A0A0B4J268 AP001109.1-201ENST00000587114 279 ntTSL 3 BASIC1.11□□□□□ -2.23
TRAV4A0A0B4J268 MIR8084-201ENST00000614105 89 ntBASIC1.11□□□□□ -2.23
TRAV4A0A0B4J268 MIR6134-201ENST00000617606 109 ntBASIC1.11□□□□□ -2.23
TRAV4A0A0B4J268 AC013470.2-206ENST00000636804 771 ntAPPRIS P5 TSL 5 BASIC1.11□□□□□ -2.23
TRAV4A0A0B4J268 U6.99-201ENST00000637524 83 ntBASIC1.11□□□□□ -2.23
TRAV4A0A0B4J268 AC099063.3-201ENST00000642066 185 ntBASIC1.11□□□□□ -2.23
TRAV4A0A0B4J268 RBBP8P1-201ENST00000449447 1844 ntBASIC1.1□□□□□ -2.23
TRAV4A0A0B4J268 SAGE1-201ENST00000324447 2952 ntAPPRIS P2 TSL 5 BASIC1.1□□□□□ -2.23
TRAV4A0A0B4J268 AC103993.1-201ENST00000521500 1584 ntTSL 5 BASIC1.1□□□□□ -2.23
TRAV4A0A0B4J268 OR5T3-201ENST00000303059 1023 ntBASIC1.1□□□□□ -2.23
TRAV4A0A0B4J268 RNU6-1032P-201ENST00000384100 107 ntBASIC1.1□□□□□ -2.23
TRAV4A0A0B4J268 RNU6-1122P-201ENST00000384449 107 ntBASIC1.1□□□□□ -2.23
TRAV4A0A0B4J268 MIR517C-201ENST00000385103 95 ntBASIC1.1□□□□□ -2.23
TRAV4A0A0B4J268 TRAJ23-201ENST00000390514 63 ntAPPRIS P1 BASIC1.1□□□□□ -2.23
TRAV4A0A0B4J268 RNU6-952P-201ENST00000391164 108 ntBASIC1.1□□□□□ -2.23
TRAV4A0A0B4J268 AL133475.1-201ENST00000404414 305 ntBASIC1.1□□□□□ -2.23
TRAV4A0A0B4J268 RNA5SP501-201ENST00000410990 112 ntBASIC1.1□□□□□ -2.23
TRAV4A0A0B4J268 AC079150.1-201ENST00000413043 383 ntTSL 3 BASIC1.1□□□□□ -2.23
TRAV4A0A0B4J268 AL158840.1-201ENST00000414132 523 ntTSL 3 BASIC1.1□□□□□ -2.23
TRAV4A0A0B4J268 AL358453.1-201ENST00000422522 250 ntBASIC1.1□□□□□ -2.23
TRAV4A0A0B4J268 AC007677.1-201ENST00000445757 515 ntBASIC1.1□□□□□ -2.23
TRAV4A0A0B4J268 USP9YP10-201ENST00000454868 628 ntBASIC1.1□□□□□ -2.23
TRAV4A0A0B4J268 MTND2P30-201ENST00000456663 382 ntBASIC1.1□□□□□ -2.23
TRAV4A0A0B4J268 AL024497.2-201ENST00000457081 317 ntTSL 3 BASIC1.1□□□□□ -2.23
TRAV4A0A0B4J268 CHRM3-AS2-203ENST00000458325 895 ntTSL 2 BASIC1.1□□□□□ -2.23
TRAV4A0A0B4J268 RNU7-136P-201ENST00000458819 69 ntBASIC1.1□□□□□ -2.23
TRAV4A0A0B4J268 AC093297.2-205ENST00000508123 572 ntTSL 3 BASIC1.1□□□□□ -2.23
TRAV4A0A0B4J268 LINC02201-201ENST00000508992 468 ntTSL 2 BASIC1.1□□□□□ -2.23
TRAV4A0A0B4J268 AC093809.1-201ENST00000509155 340 ntBASIC1.1□□□□□ -2.23
TRAV4A0A0B4J268 AC116337.1-201ENST00000509680 687 ntBASIC1.1□□□□□ -2.23
TRAV4A0A0B4J268 RNU6-1183P-201ENST00000517054 60 ntBASIC1.1□□□□□ -2.23
TRAV4A0A0B4J268 RNU6-586P-201ENST00000517265 104 ntBASIC1.1□□□□□ -2.23
TRAV4A0A0B4J268 IGLVVI-22-1-201ENST00000521183 211 ntBASIC1.1□□□□□ -2.23
TRAV4A0A0B4J268 CA1-215ENST00000522389 551 ntTSL 3 BASIC1.1□□□□□ -2.23
TRAV4A0A0B4J268 AP000889.1-201ENST00000530968 660 ntBASIC1.1□□□□□ -2.23
TRAV4A0A0B4J268 SLC2A13P1-201ENST00000531560 322 ntBASIC1.1□□□□□ -2.23
TRAV4A0A0B4J268 CARD18-203ENST00000532895 422 ntTSL 2 BASIC1.1□□□□□ -2.23
TRAV4A0A0B4J268 AC092747.1-202ENST00000540595 380 ntTSL 5 BASIC1.1□□□□□ -2.23
TRAV4A0A0B4J268 AC135279.1-201ENST00000543493 504 ntBASIC1.1□□□□□ -2.23
TRAV4A0A0B4J268 OR6C7P-201ENST00000547875 934 ntBASIC1.1□□□□□ -2.23
TRAV4A0A0B4J268 LINC00557-201ENST00000563184 1279 ntBASIC1.1□□□□□ -2.23
TRAV4A0A0B4J268 AC005909.1-201ENST00000577835 755 ntTSL 3 BASIC1.1□□□□□ -2.23
TRAV4A0A0B4J268 SNORD53B-201ENST00000577887 78 ntBASIC1.1□□□□□ -2.23
TRAV4A0A0B4J268 MIR3945-201ENST00000581853 98 ntBASIC1.1□□□□□ -2.23
TRAV4A0A0B4J268 AL589765.7-201ENST00000601684 629 ntTSL 3 BASIC1.1□□□□□ -2.23
TRAV4A0A0B4J268 MIR7974-201ENST00000615835 79 ntBASIC1.1□□□□□ -2.23
TRAV4A0A0B4J268 CUL3-203ENST00000409096 2701 ntTSL 1 (best) BASIC1.1□□□□□ -2.23
TRAV4A0A0B4J268 CENPQ-201ENST00000335783 1733 ntAPPRIS P1 TSL 1 (best) BASIC1.09□□□□□ -2.23
TRAV4A0A0B4J268 SEMG2-201ENST00000372769 2051 ntAPPRIS P1 TSL 1 (best) BASIC1.09□□□□□ -2.23
TRAV4A0A0B4J268 Y_RNA.67-201ENST00000362870 100 ntBASIC1.09□□□□□ -2.23
Retrieved 100 of 98,524 protein–RNA pairs in 100.5 ms