Protein–RNA interactions for Protein: Q9Y5S2

CDC42BPB, Serine/threonine-protein kinase MRCK beta, humanhuman

Predictions only

Length 1,711 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42BPBQ9Y5S2 GPR34-201ENST00000378138 1815 ntAPPRIS P1 TSL 1 (best) BASIC2.4□□□□□ -2.03
CDC42BPBQ9Y5S2 CLLU1-201ENST00000378485 3897 ntAPPRIS P1 TSL 1 (best) BASIC2.4□□□□□ -2.03
CDC42BPBQ9Y5S2 VIM-AS1-201ENST00000437232 1351 ntTSL 2 BASIC2.4□□□□□ -2.03
CDC42BPBQ9Y5S2 RNU5F-7P-201ENST00000363696 115 ntBASIC2.39□□□□□ -2.03
CDC42BPBQ9Y5S2 Y_RNA.548-201ENST00000384656 105 ntBASIC2.39□□□□□ -2.03
CDC42BPBQ9Y5S2 FCF1P10-201ENST00000407590 479 ntBASIC2.39□□□□□ -2.03
CDC42BPBQ9Y5S2 CDK8P2-201ENST00000415020 547 ntBASIC2.39□□□□□ -2.03
CDC42BPBQ9Y5S2 AC099677.1-201ENST00000420575 175 ntBASIC2.39□□□□□ -2.03
CDC42BPBQ9Y5S2 BEND7P1-201ENST00000422058 457 ntBASIC2.39□□□□□ -2.03
CDC42BPBQ9Y5S2 HMGB3P30-201ENST00000457863 606 ntBASIC2.39□□□□□ -2.03
CDC42BPBQ9Y5S2 snoU109.4-201ENST00000458953 143 ntBASIC2.39□□□□□ -2.03
CDC42BPBQ9Y5S2 RNA5SP269-201ENST00000459032 137 ntBASIC2.39□□□□□ -2.03
CDC42BPBQ9Y5S2 HMGB1P36-201ENST00000487709 576 ntBASIC2.39□□□□□ -2.03
CDC42BPBQ9Y5S2 AC090255.1-201ENST00000495779 349 ntBASIC2.39□□□□□ -2.03
CDC42BPBQ9Y5S2 LINC00492-201ENST00000504436 593 ntTSL 3 BASIC2.39□□□□□ -2.03
CDC42BPBQ9Y5S2 AC034234.1-202ENST00000508696 339 ntTSL 3 BASIC2.39□□□□□ -2.03
CDC42BPBQ9Y5S2 AC079349.1-201ENST00000509096 589 ntTSL 2 BASIC2.39□□□□□ -2.03
CDC42BPBQ9Y5S2 MTCO3P7-201ENST00000510008 774 ntBASIC2.39□□□□□ -2.03
CDC42BPBQ9Y5S2 RNU6-1003P-201ENST00000517099 105 ntBASIC2.39□□□□□ -2.03
CDC42BPBQ9Y5S2 AC083973.1-205ENST00000518994 601 ntTSL 2 BASIC2.39□□□□□ -2.03
CDC42BPBQ9Y5S2 AC090739.1-201ENST00000522190 708 ntTSL 3 BASIC2.39□□□□□ -2.03
CDC42BPBQ9Y5S2 LINC02384-205ENST00000539404 785 ntTSL 3 BASIC2.39□□□□□ -2.03
CDC42BPBQ9Y5S2 AL352984.1-201ENST00000556949 276 ntTSL 3 BASIC2.39□□□□□ -2.03
CDC42BPBQ9Y5S2 ZNF192P1-203ENST00000565888 810 ntBASIC2.39□□□□□ -2.03
CDC42BPBQ9Y5S2 LIVAR-201ENST00000578633 384 ntTSL 3 BASIC2.39□□□□□ -2.03
CDC42BPBQ9Y5S2 AC037487.2-201ENST00000581796 537 ntTSL 3 BASIC2.39□□□□□ -2.03
CDC42BPBQ9Y5S2 SNRPGP15-201ENST00000600149 222 ntBASIC2.39□□□□□ -2.03
CDC42BPBQ9Y5S2 RNF219-AS1-205ENST00000605996 792 ntTSL 5 BASIC2.39□□□□□ -2.03
CDC42BPBQ9Y5S2 AL596245.1-201ENST00000618994 362 ntBASIC2.39□□□□□ -2.03
CDC42BPBQ9Y5S2 AC006065.5-201ENST00000623427 349 ntBASIC2.39□□□□□ -2.03
CDC42BPBQ9Y5S2 AL109809.4-201ENST00000603520 2185 ntBASIC2.39□□□□□ -2.03
CDC42BPBQ9Y5S2 TBL1XR1-208ENST00000430069 7948 ntAPPRIS P1 TSL 1 (best) BASIC2.39□□□□□ -2.03
CDC42BPBQ9Y5S2 SNORA7.1-201ENST00000363750 139 ntBASIC2.39□□□□□ -2.03
CDC42BPBQ9Y5S2 RNU1-42P-201ENST00000364033 160 ntBASIC2.39□□□□□ -2.03
CDC42BPBQ9Y5S2 RNU6-339P-201ENST00000384310 107 ntBASIC2.39□□□□□ -2.03
CDC42BPBQ9Y5S2 Y_RNA.493-201ENST00000384422 102 ntBASIC2.39□□□□□ -2.03
CDC42BPBQ9Y5S2 RNY3P10-201ENST00000384764 102 ntBASIC2.39□□□□□ -2.03
CDC42BPBQ9Y5S2 ZNF468-202ENST00000396409 384 ntTSL 5 BASIC2.39□□□□□ -2.03
CDC42BPBQ9Y5S2 HMGB3P2-201ENST00000411913 584 ntBASIC2.39□□□□□ -2.03
CDC42BPBQ9Y5S2 AL096799.1-201ENST00000425900 381 ntTSL 2 BASIC2.39□□□□□ -2.03
CDC42BPBQ9Y5S2 AL080248.1-201ENST00000428954 388 ntTSL 3 BASIC2.39□□□□□ -2.03
CDC42BPBQ9Y5S2 AC006042.4-201ENST00000451066 692 ntTSL 5 BASIC2.39□□□□□ -2.03
CDC42BPBQ9Y5S2 AC092798.1-201ENST00000458542 409 ntBASIC2.39□□□□□ -2.03
CDC42BPBQ9Y5S2 snoU13.8-201ENST00000458890 104 ntBASIC2.39□□□□□ -2.03
CDC42BPBQ9Y5S2 AC034222.1-201ENST00000494052 532 ntBASIC2.39□□□□□ -2.03
CDC42BPBQ9Y5S2 RPL23AP55-201ENST00000498163 452 ntBASIC2.39□□□□□ -2.03
CDC42BPBQ9Y5S2 AC093297.2-207ENST00000505401 692 ntTSL 3 BASIC2.39□□□□□ -2.03
CDC42BPBQ9Y5S2 AC010424.1-201ENST00000506336 297 ntBASIC2.39□□□□□ -2.03
CDC42BPBQ9Y5S2 AC104663.1-201ENST00000508555 557 ntTSL 2 BASIC2.39□□□□□ -2.03
CDC42BPBQ9Y5S2 NDUFB4P2-201ENST00000509515 391 ntBASIC2.39□□□□□ -2.03
CDC42BPBQ9Y5S2 Y_RNA.695-201ENST00000516715 107 ntBASIC2.39□□□□□ -2.03
CDC42BPBQ9Y5S2 AP002963.1-201ENST00000530590 184 ntBASIC2.39□□□□□ -2.03
CDC42BPBQ9Y5S2 LINC02235-201ENST00000534675 466 ntTSL 5 BASIC2.39□□□□□ -2.03
CDC42BPBQ9Y5S2 AC084756.1-201ENST00000558237 606 ntTSL 5 BASIC2.39□□□□□ -2.03
CDC42BPBQ9Y5S2 AC012414.6-201ENST00000568241 401 ntBASIC2.39□□□□□ -2.03
CDC42BPBQ9Y5S2 AC090615.1-201ENST00000577519 154 ntBASIC2.39□□□□□ -2.03
CDC42BPBQ9Y5S2 AC098848.2-201ENST00000588023 330 ntBASIC2.39□□□□□ -2.03
CDC42BPBQ9Y5S2 AC092140.2-201ENST00000618027 521 ntBASIC2.39□□□□□ -2.03
CDC42BPBQ9Y5S2 AC009509.4-201ENST00000619202 509 ntBASIC2.39□□□□□ -2.03
CDC42BPBQ9Y5S2 AC002550.2-201ENST00000621246 394 ntBASIC2.39□□□□□ -2.03
CDC42BPBQ9Y5S2 Metazoa_SRP.32-201ENST00000622685 286 ntBASIC2.39□□□□□ -2.03
CDC42BPBQ9Y5S2 AP003171.2-202ENST00000634657 355 ntTSL 5 BASIC2.39□□□□□ -2.03
CDC42BPBQ9Y5S2 AC092447.10-201ENST00000620607 1652 ntBASIC2.39□□□□□ -2.03
CDC42BPBQ9Y5S2 MAP3K2-203ENST00000409947 10992 ntAPPRIS P1 TSL 1 (best) BASIC2.38□□□□□ -2.03
CDC42BPBQ9Y5S2 MTND5P3-201ENST00000438536 1800 ntBASIC2.38□□□□□ -2.03
CDC42BPBQ9Y5S2 SNORD115.1-201ENST00000391109 76 ntBASIC2.38□□□□□ -2.03
CDC42BPBQ9Y5S2 AC008440.2-201ENST00000413496 423 ntTSL 5 BASIC2.38□□□□□ -2.03
CDC42BPBQ9Y5S2 AL391704.1-203ENST00000414903 462 ntTSL 3 BASIC2.38□□□□□ -2.03
CDC42BPBQ9Y5S2 MTND1P23-201ENST00000416931 372 ntBASIC2.38□□□□□ -2.03
CDC42BPBQ9Y5S2 LINC01701-201ENST00000419614 451 ntTSL 2 BASIC2.38□□□□□ -2.03
CDC42BPBQ9Y5S2 USP9YP29-201ENST00000445112 563 ntBASIC2.38□□□□□ -2.03
CDC42BPBQ9Y5S2 AL137159.1-201ENST00000452808 512 ntBASIC2.38□□□□□ -2.03
CDC42BPBQ9Y5S2 TPTE2P5-203ENST00000458118 728 ntBASIC2.38□□□□□ -2.03
CDC42BPBQ9Y5S2 AF131216.2-201ENST00000512316 564 ntBASIC2.38□□□□□ -2.03
CDC42BPBQ9Y5S2 AC108471.2-204ENST00000526807 784 ntTSL 5 BASIC2.38□□□□□ -2.03
CDC42BPBQ9Y5S2 AP003497.1-201ENST00000528472 562 ntBASIC2.38□□□□□ -2.03
CDC42BPBQ9Y5S2 AC103798.1-201ENST00000532562 376 ntTSL 2 BASIC2.38□□□□□ -2.03
CDC42BPBQ9Y5S2 SMILR-201ENST00000533992 553 ntTSL 4 BASIC2.38□□□□□ -2.03
CDC42BPBQ9Y5S2 AC068993.2-201ENST00000546563 395 ntTSL 5 BASIC2.38□□□□□ -2.03
CDC42BPBQ9Y5S2 TIMM9-208ENST00000556007 746 ntTSL 3 BASIC2.38□□□□□ -2.03
CDC42BPBQ9Y5S2 AC066612.2-201ENST00000559875 695 ntTSL 2 BASIC2.38□□□□□ -2.03
CDC42BPBQ9Y5S2 AC009558.1-201ENST00000561174 581 ntTSL 4 BASIC2.38□□□□□ -2.03
CDC42BPBQ9Y5S2 LINC02562-201ENST00000561705 785 ntTSL 2 BASIC2.38□□□□□ -2.03
CDC42BPBQ9Y5S2 ALDH3A2-208ENST00000571163 590 ntTSL 5 BASIC2.38□□□□□ -2.03
CDC42BPBQ9Y5S2 LINC01919-202ENST00000579506 384 ntTSL 3 BASIC2.38□□□□□ -2.03
CDC42BPBQ9Y5S2 ZNF573-209ENST00000585724 453 ntTSL 5 BASIC2.38□□□□□ -2.03
CDC42BPBQ9Y5S2 AL031176.1-201ENST00000604554 466 ntBASIC2.38□□□□□ -2.03
CDC42BPBQ9Y5S2 AC097468.3-201ENST00000607956 456 ntBASIC2.38□□□□□ -2.03
CDC42BPBQ9Y5S2 AC009878.1-201ENST00000621819 340 ntBASIC2.38□□□□□ -2.03
CDC42BPBQ9Y5S2 CDK1-202ENST00000373809 1613 ntTSL 1 (best) BASIC2.38□□□□□ -2.03
CDC42BPBQ9Y5S2 TEX21P-201ENST00000447107 1476 ntBASIC2.38□□□□□ -2.03
CDC42BPBQ9Y5S2 MDM2-206ENST00000350057 1401 ntTSL 1 (best) BASIC2.37□□□□□ -2.03
CDC42BPBQ9Y5S2 AC092104.1-201ENST00000497346 1441 ntBASIC2.37□□□□□ -2.03
CDC42BPBQ9Y5S2 USP53-202ENST00000450251 6072 ntAPPRIS P1 TSL 5 BASIC2.37□□□□□ -2.03
CDC42BPBQ9Y5S2 GABRG2-208ENST00000638552 3710 ntTSL 5 BASIC2.37□□□□□ -2.03
CDC42BPBQ9Y5S2 RNY4P24-201ENST00000362735 96 ntBASIC2.37□□□□□ -2.03
CDC42BPBQ9Y5S2 RNU6-359P-201ENST00000365466 108 ntBASIC2.37□□□□□ -2.03
CDC42BPBQ9Y5S2 IVNS1ABP-201ENST00000367497 746 ntTSL 5 BASIC2.37□□□□□ -2.03
CDC42BPBQ9Y5S2 ZNF705D-201ENST00000400078 925 ntAPPRIS P1 TSL 2 BASIC2.37□□□□□ -2.03
CDC42BPBQ9Y5S2 RPS20P2-201ENST00000402520 389 ntBASIC2.37□□□□□ -2.03
Retrieved 100 of 98,524 protein–RNA pairs in 126.5 ms