Protein–RNA interactions for Protein: Q9Y5H4

PCDHGA1, Protocadherin gamma-A1, humanhuman

Predictions only

Length 931 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHGA1Q9Y5H4 AC109329.2-201ENST00000519658 482 ntBASIC2.74□□□□□ -1.97
PCDHGA1Q9Y5H4 HMGB1P41-201ENST00000520234 440 ntBASIC2.74□□□□□ -1.97
PCDHGA1Q9Y5H4 AP001646.3-201ENST00000526305 446 ntTSL 2 BASIC2.74□□□□□ -1.97
PCDHGA1Q9Y5H4 AP002453.2-201ENST00000533503 320 ntBASIC2.74□□□□□ -1.97
PCDHGA1Q9Y5H4 AC073591.1-201ENST00000552736 597 ntTSL 3 BASIC2.74□□□□□ -1.97
PCDHGA1Q9Y5H4 AL049775.2-201ENST00000557547 558 ntTSL 4 BASIC2.74□□□□□ -1.97
PCDHGA1Q9Y5H4 AC021739.1-201ENST00000559631 174 ntBASIC2.74□□□□□ -1.97
PCDHGA1Q9Y5H4 AC130469.1-201ENST00000597256 388 ntTSL 5 BASIC2.74□□□□□ -1.97
PCDHGA1Q9Y5H4 SEPT7P9-203ENST00000604116 343 ntBASIC2.74□□□□□ -1.97
PCDHGA1Q9Y5H4 AL133173.2-201ENST00000614270 90 ntBASIC2.74□□□□□ -1.97
PCDHGA1Q9Y5H4 CU459211.1-201ENST00000635667 749 ntBASIC2.74□□□□□ -1.97
PCDHGA1Q9Y5H4 MTND5P42-201ENST00000637720 498 ntBASIC2.74□□□□□ -1.97
PCDHGA1Q9Y5H4 ERBIN-202ENST00000380935 6692 ntTSL 5 BASIC2.74□□□□□ -1.97
PCDHGA1Q9Y5H4 COPS2-203ENST00000542928 1580 ntTSL 2 BASIC2.74□□□□□ -1.97
PCDHGA1Q9Y5H4 CCDC82-202ENST00000423339 1878 ntAPPRIS P2 TSL 1 (best) BASIC2.73□□□□□ -1.97
PCDHGA1Q9Y5H4 AL355596.1-201ENST00000565399 3996 ntBASIC2.73□□□□□ -1.97
PCDHGA1Q9Y5H4 SPAM1-206ENST00000460182 2154 ntAPPRIS ALT2 TSL 1 (best) BASIC2.73□□□□□ -1.97
PCDHGA1Q9Y5H4 ADAM3A-203ENST00000461344 2157 ntBASIC2.73□□□□□ -1.97
PCDHGA1Q9Y5H4 NACAP2-201ENST00000318548 624 ntBASIC2.73□□□□□ -1.97
PCDHGA1Q9Y5H4 IL36B-202ENST00000327407 1052 ntAPPRIS P1 TSL 1 (best) BASIC2.73□□□□□ -1.97
PCDHGA1Q9Y5H4 RNY1P12-201ENST00000364251 105 ntBASIC2.73□□□□□ -1.97
PCDHGA1Q9Y5H4 RNU6-169P-201ENST00000365336 107 ntBASIC2.73□□□□□ -1.97
PCDHGA1Q9Y5H4 RNU6-946P-201ENST00000383878 107 ntBASIC2.73□□□□□ -1.97
PCDHGA1Q9Y5H4 SNORA20.2-201ENST00000383922 131 ntBASIC2.73□□□□□ -1.97
PCDHGA1Q9Y5H4 RNU6-39P-201ENST00000384344 107 ntBASIC2.73□□□□□ -1.97
PCDHGA1Q9Y5H4 SNORA46-201ENST00000384762 135 ntBASIC2.73□□□□□ -1.97
PCDHGA1Q9Y5H4 AL138827.1-201ENST00000402666 306 ntBASIC2.73□□□□□ -1.97
PCDHGA1Q9Y5H4 RPS12P24-201ENST00000412619 387 ntBASIC2.73□□□□□ -1.97
PCDHGA1Q9Y5H4 ELF3-AS1-201ENST00000415582 500 ntTSL 2 BASIC2.73□□□□□ -1.97
PCDHGA1Q9Y5H4 RBM6-203ENST00000421682 684 ntTSL 2 BASIC2.73□□□□□ -1.97
PCDHGA1Q9Y5H4 SKA2P1-201ENST00000425592 390 ntBASIC2.73□□□□□ -1.97
PCDHGA1Q9Y5H4 LINC01724-201ENST00000430519 621 ntTSL 3 BASIC2.73□□□□□ -1.97
PCDHGA1Q9Y5H4 ARL5AP4-201ENST00000430731 512 ntBASIC2.73□□□□□ -1.97
PCDHGA1Q9Y5H4 AL356277.3-201ENST00000432484 618 ntTSL 3 BASIC2.73□□□□□ -1.97
PCDHGA1Q9Y5H4 AC007285.2-201ENST00000433088 518 ntTSL 3 BASIC2.73□□□□□ -1.97
PCDHGA1Q9Y5H4 AC112518.1-201ENST00000436089 575 ntTSL 4 BASIC2.73□□□□□ -1.97
PCDHGA1Q9Y5H4 AL445687.1-201ENST00000439946 251 ntBASIC2.73□□□□□ -1.97
PCDHGA1Q9Y5H4 AL031667.1-201ENST00000440222 725 ntBASIC2.73□□□□□ -1.97
PCDHGA1Q9Y5H4 AL359853.2-201ENST00000442108 353 ntTSL 2 BASIC2.73□□□□□ -1.97
PCDHGA1Q9Y5H4 BRK1P2-201ENST00000442875 223 ntBASIC2.73□□□□□ -1.97
PCDHGA1Q9Y5H4 USP9YP29-201ENST00000445112 563 ntBASIC2.73□□□□□ -1.97
PCDHGA1Q9Y5H4 MTATP6P26-201ENST00000445926 662 ntBASIC2.73□□□□□ -1.97
PCDHGA1Q9Y5H4 AL136380.1-201ENST00000447970 162 ntBASIC2.73□□□□□ -1.97
PCDHGA1Q9Y5H4 AL441985.1-201ENST00000457727 251 ntBASIC2.73□□□□□ -1.97
PCDHGA1Q9Y5H4 AC008716.1-201ENST00000511084 513 ntBASIC2.73□□□□□ -1.97
PCDHGA1Q9Y5H4 Vault.3-201ENST00000516676 95 ntBASIC2.73□□□□□ -1.97
PCDHGA1Q9Y5H4 LINC02545-201ENST00000525381 306 ntTSL 3 BASIC2.73□□□□□ -1.97
PCDHGA1Q9Y5H4 AC087318.1-201ENST00000536786 389 ntTSL 3 BASIC2.73□□□□□ -1.97
PCDHGA1Q9Y5H4 AL512310.1-201ENST00000548639 172 ntBASIC2.73□□□□□ -1.97
PCDHGA1Q9Y5H4 MIR3117-201ENST00000584034 78 ntBASIC2.73□□□□□ -1.97
PCDHGA1Q9Y5H4 NRBF2P1-201ENST00000587407 859 ntBASIC2.73□□□□□ -1.97
PCDHGA1Q9Y5H4 AL359198.2-201ENST00000611836 194 ntBASIC2.73□□□□□ -1.97
PCDHGA1Q9Y5H4 AL161782.1-201ENST00000622930 586 ntTSL 3 BASIC2.73□□□□□ -1.97
PCDHGA1Q9Y5H4 OR4C16-201ENST00000623907 933 ntAPPRIS P1 BASIC2.73□□□□□ -1.97
PCDHGA1Q9Y5H4 AC092608.2-201ENST00000624427 218 ntBASIC2.73□□□□□ -1.97
PCDHGA1Q9Y5H4 AC243829.7-201ENST00000633081 225 ntBASIC2.73□□□□□ -1.97
PCDHGA1Q9Y5H4 AC110994.2-201ENST00000635481 492 ntBASIC2.73□□□□□ -1.97
PCDHGA1Q9Y5H4 HMHB1-202ENST00000638299 126 ntAPPRIS P2 TSL 1 (best) BASIC2.73□□□□□ -1.97
PCDHGA1Q9Y5H4 MTND5P30-201ENST00000452896 1731 ntBASIC2.73□□□□□ -1.97
PCDHGA1Q9Y5H4 CCSAP-202ENST00000366686 4399 ntTSL 2 BASIC2.72□□□□□ -1.97
PCDHGA1Q9Y5H4 SLC6A15-202ENST00000309283 3108 ntTSL 5 BASIC2.72□□□□□ -1.97
PCDHGA1Q9Y5H4 HSFY1-202ENST00000309834 1038 ntAPPRIS ALT2 TSL 1 (best) BASIC2.72□□□□□ -1.97
PCDHGA1Q9Y5H4 HSFY2-202ENST00000344884 1038 ntAPPRIS ALT2 TSL 1 (best) BASIC2.72□□□□□ -1.97
PCDHGA1Q9Y5H4 RNU6-288P-201ENST00000363690 104 ntBASIC2.72□□□□□ -1.97
PCDHGA1Q9Y5H4 CRLS1-202ENST00000378868 994 ntTSL 5 BASIC2.72□□□□□ -1.97
PCDHGA1Q9Y5H4 MIR558-201ENST00000384920 94 ntBASIC2.72□□□□□ -1.97
PCDHGA1Q9Y5H4 BCL2L11-207ENST00000405953 425 ntTSL 1 (best) BASIC2.72□□□□□ -1.97
PCDHGA1Q9Y5H4 AC105271.1-202ENST00000411417 445 ntTSL 3 BASIC2.72□□□□□ -1.97
PCDHGA1Q9Y5H4 AL158840.1-201ENST00000414132 523 ntTSL 3 BASIC2.72□□□□□ -1.97
PCDHGA1Q9Y5H4 IL33-202ENST00000417746 2327 ntTSL 2 BASIC2.72□□□□□ -1.97
PCDHGA1Q9Y5H4 AC093843.1-201ENST00000424395 512 ntTSL 2 BASIC2.72□□□□□ -1.97
PCDHGA1Q9Y5H4 AL731684.2-201ENST00000426839 333 ntTSL 5 BASIC2.72□□□□□ -1.97
PCDHGA1Q9Y5H4 ISCA1P6-201ENST00000427740 390 ntBASIC2.72□□□□□ -1.97
PCDHGA1Q9Y5H4 AC073614.1-201ENST00000438690 650 ntBASIC2.72□□□□□ -1.97
PCDHGA1Q9Y5H4 LINC02195-201ENST00000443373 294 ntTSL 3 BASIC2.72□□□□□ -1.97
PCDHGA1Q9Y5H4 DPPA3P1-201ENST00000448050 469 ntBASIC2.72□□□□□ -1.97
PCDHGA1Q9Y5H4 HMGN2P10-201ENST00000448085 265 ntBASIC2.72□□□□□ -1.97
PCDHGA1Q9Y5H4 LINC01828-202ENST00000450294 955 ntTSL 5 BASIC2.72□□□□□ -1.97
PCDHGA1Q9Y5H4 AL109763.1-201ENST00000455391 461 ntTSL 2 BASIC2.72□□□□□ -1.97
PCDHGA1Q9Y5H4 AC007182.2-201ENST00000489251 402 ntBASIC2.72□□□□□ -1.97
PCDHGA1Q9Y5H4 AL136537.1-201ENST00000508199 538 ntTSL 3 BASIC2.72□□□□□ -1.97
PCDHGA1Q9Y5H4 AC104663.1-201ENST00000508555 557 ntTSL 2 BASIC2.72□□□□□ -1.97
PCDHGA1Q9Y5H4 AC098591.2-201ENST00000510152 315 ntBASIC2.72□□□□□ -1.97
PCDHGA1Q9Y5H4 RNU6-677P-201ENST00000516914 101 ntBASIC2.72□□□□□ -1.97
PCDHGA1Q9Y5H4 SMIM18-201ENST00000517349 905 ntAPPRIS P1 TSL 2 BASIC2.72□□□□□ -1.97
PCDHGA1Q9Y5H4 UTP23-205ENST00000520733 369 ntTSL 3 BASIC2.72□□□□□ -1.97
PCDHGA1Q9Y5H4 PICALM-209ENST00000528398 2049 ntTSL 2 BASIC2.72□□□□□ -1.97
PCDHGA1Q9Y5H4 HOMER1-205ENST00000535690 642 ntTSL 1 (best) BASIC2.72□□□□□ -1.97
PCDHGA1Q9Y5H4 AC091534.1-202ENST00000549953 468 ntTSL 5 BASIC2.72□□□□□ -1.97
PCDHGA1Q9Y5H4 AL139317.3-202ENST00000555689 528 ntTSL 5 BASIC2.72□□□□□ -1.97
PCDHGA1Q9Y5H4 AP005136.1-201ENST00000579765 429 ntBASIC2.72□□□□□ -1.97
PCDHGA1Q9Y5H4 AC119751.7-201ENST00000600494 245 ntBASIC2.72□□□□□ -1.97
PCDHGA1Q9Y5H4 BX546450.2-201ENST00000602419 435 ntTSL 5 BASIC2.72□□□□□ -1.97
PCDHGA1Q9Y5H4 AL391813.1-201ENST00000603098 260 ntBASIC2.72□□□□□ -1.97
PCDHGA1Q9Y5H4 AC004520.1-201ENST00000608362 1413 ntBASIC2.72□□□□□ -1.97
PCDHGA1Q9Y5H4 MIR6733-201ENST00000635723 61 ntBASIC2.72□□□□□ -1.97
PCDHGA1Q9Y5H4 MIR7157-201ENST00000635801 60 ntBASIC2.72□□□□□ -1.97
PCDHGA1Q9Y5H4 ZNF334-205ENST00000615481 3706 ntAPPRIS ALT2 TSL 5 BASIC2.72□□□□□ -1.97
PCDHGA1Q9Y5H4 AGTPBP1-205ENST00000376083 4208 ntAPPRIS P1 TSL 1 (best) BASIC2.72□□□□□ -1.97
PCDHGA1Q9Y5H4 PARPBP-203ENST00000392911 1916 ntTSL 5 BASIC2.72□□□□□ -1.97
Retrieved 100 of 98,524 protein–RNA pairs in 96.7 ms