Protein–RNA interactions for Protein: Q9Y5H2

PCDHGA11, Protocadherin gamma-A11, humanhuman

Predictions only

Length 935 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHGA11Q9Y5H2 LARP4-202ENST00000347328 3621 ntTSL 1 (best) BASIC4.81□□□□□ -1.64
PCDHGA11Q9Y5H2 DCLRE1A-201ENST00000361384 4468 ntAPPRIS P1 TSL 1 (best) BASIC4.81□□□□□ -1.64
PCDHGA11Q9Y5H2 FANCI-201ENST00000300027 4713 ntAPPRIS P3 TSL 5 BASIC4.81□□□□□ -1.64
PCDHGA11Q9Y5H2 ZNF284-201ENST00000421176 4351 ntAPPRIS P1 TSL 1 (best) BASIC4.81□□□□□ -1.64
PCDHGA11Q9Y5H2 ABCB5-202ENST00000404938 5811 ntAPPRIS P1 TSL 1 (best) BASIC4.8□□□□□ -1.64
PCDHGA11Q9Y5H2 SYNE2-203ENST00000357395 21555 ntTSL 5 BASIC4.8□□□□□ -1.64
PCDHGA11Q9Y5H2 AC090740.1-201ENST00000623193 2262 ntBASIC4.8□□□□□ -1.64
PCDHGA11Q9Y5H2 TCHHL1-201ENST00000368806 3603 ntAPPRIS P1 TSL 1 (best) BASIC4.8□□□□□ -1.64
PCDHGA11Q9Y5H2 AGBL2-201ENST00000357610 3295 ntAPPRIS ALT2 TSL 5 BASIC4.8□□□□□ -1.64
PCDHGA11Q9Y5H2 SNURFL-201ENST00000309296 343 ntBASIC4.8□□□□□ -1.64
PCDHGA11Q9Y5H2 UBE2WP1-201ENST00000362030 340 ntBASIC4.8□□□□□ -1.64
PCDHGA11Q9Y5H2 SNORD56.1-201ENST00000362913 68 ntBASIC4.8□□□□□ -1.64
PCDHGA11Q9Y5H2 OR14A2-201ENST00000366485 945 ntAPPRIS P1 BASIC4.8□□□□□ -1.64
PCDHGA11Q9Y5H2 RNY1P5-201ENST00000383890 115 ntBASIC4.8□□□□□ -1.64
PCDHGA11Q9Y5H2 RNU1-73P-201ENST00000383971 164 ntBASIC4.8□□□□□ -1.64
PCDHGA11Q9Y5H2 RNU6-217P-201ENST00000384164 104 ntBASIC4.8□□□□□ -1.64
PCDHGA11Q9Y5H2 SNORA70.10-201ENST00000384515 134 ntBASIC4.8□□□□□ -1.64
PCDHGA11Q9Y5H2 Y_RNA.570-201ENST00000384750 101 ntBASIC4.8□□□□□ -1.64
PCDHGA11Q9Y5H2 MIR613-201ENST00000385248 95 ntBASIC4.8□□□□□ -1.64
PCDHGA11Q9Y5H2 AC092660.1-201ENST00000420648 371 ntTSL 2 BASIC4.8□□□□□ -1.64
PCDHGA11Q9Y5H2 AL353743.2-202ENST00000439544 473 ntTSL 3 BASIC4.8□□□□□ -1.64
PCDHGA11Q9Y5H2 RPS17P2-201ENST00000461663 408 ntBASIC4.8□□□□□ -1.64
PCDHGA11Q9Y5H2 RN7SL517P-201ENST00000462240 305 ntBASIC4.8□□□□□ -1.64
PCDHGA11Q9Y5H2 RPL26P26-201ENST00000480251 434 ntBASIC4.8□□□□□ -1.64
PCDHGA11Q9Y5H2 MORC1-AS1-201ENST00000480826 564 ntTSL 2 BASIC4.8□□□□□ -1.64
PCDHGA11Q9Y5H2 AC016632.1-201ENST00000503994 196 ntBASIC4.8□□□□□ -1.64
PCDHGA11Q9Y5H2 AC074198.2-201ENST00000508153 258 ntBASIC4.8□□□□□ -1.64
PCDHGA11Q9Y5H2 AC091874.1-201ENST00000511402 339 ntBASIC4.8□□□□□ -1.64
PCDHGA11Q9Y5H2 RN7SKP46-201ENST00000515942 234 ntBASIC4.8□□□□□ -1.64
PCDHGA11Q9Y5H2 SNORA27.4-201ENST00000516650 95 ntBASIC4.8□□□□□ -1.64
PCDHGA11Q9Y5H2 AC027308.1-201ENST00000517993 110 ntBASIC4.8□□□□□ -1.64
PCDHGA11Q9Y5H2 AC134698.5-201ENST00000519444 336 ntBASIC4.8□□□□□ -1.64
PCDHGA11Q9Y5H2 AC084880.2-201ENST00000536009 501 ntTSL 3 BASIC4.8□□□□□ -1.64
PCDHGA11Q9Y5H2 CR383656.8-201ENST00000549046 145 ntBASIC4.8□□□□□ -1.64
PCDHGA11Q9Y5H2 TRAV30-201ENST00000557168 337 ntAPPRIS P1 BASIC4.8□□□□□ -1.64
PCDHGA11Q9Y5H2 AC004147.3-201ENST00000577709 375 ntTSL 3 BASIC4.8□□□□□ -1.64
PCDHGA11Q9Y5H2 MIR1269B-201ENST00000580405 75 ntBASIC4.8□□□□□ -1.64
PCDHGA11Q9Y5H2 AC131274.1-201ENST00000582507 254 ntTSL 3 BASIC4.8□□□□□ -1.64
PCDHGA11Q9Y5H2 AC044839.1-205ENST00000614989 542 ntTSL 5 BASIC4.8□□□□□ -1.64
PCDHGA11Q9Y5H2 AL513314.2-204ENST00000619187 459 ntTSL 5 BASIC4.8□□□□□ -1.64
PCDHGA11Q9Y5H2 LINC01002-202ENST00000631412 459 ntTSL 5 BASIC4.8□□□□□ -1.64
PCDHGA11Q9Y5H2 AC021753.1-201ENST00000635724 168 ntBASIC4.8□□□□□ -1.64
PCDHGA11Q9Y5H2 AK9-201ENST00000285397 2566 ntTSL 1 (best) BASIC4.8□□□□□ -1.64
PCDHGA11Q9Y5H2 ZBBX-202ENST00000392764 2849 ntAPPRIS ALT2 TSL 1 (best) BASIC4.8□□□□□ -1.64
PCDHGA11Q9Y5H2 SMAD4-202ENST00000398417 8495 ntAPPRIS P1 TSL 5 BASIC4.8□□□□□ -1.64
PCDHGA11Q9Y5H2 PRLR-220ENST00000620785 11063 ntTSL 5 BASIC4.8□□□□□ -1.64
PCDHGA11Q9Y5H2 SGIP1-204ENST00000371039 4080 ntAPPRIS ALT2 TSL 1 (best) BASIC4.8□□□□□ -1.64
PCDHGA11Q9Y5H2 CSPP1-203ENST00000519668 3715 ntAPPRIS ALT2 TSL 1 (best) BASIC4.8□□□□□ -1.64
PCDHGA11Q9Y5H2 FRYL-209ENST00000506685 1940 ntTSL 5 BASIC4.8□□□□□ -1.64
PCDHGA11Q9Y5H2 RASAL2-203ENST00000462775 14453 ntAPPRIS ALT2 TSL 1 (best) BASIC4.79□□□□□ -1.64
PCDHGA11Q9Y5H2 SCOC-201ENST00000338517 1864 ntTSL 4 BASIC4.79□□□□□ -1.64
PCDHGA11Q9Y5H2 EIF4EBP2-201ENST00000373218 7257 ntAPPRIS P1 TSL 1 (best) BASIC4.79□□□□□ -1.64
PCDHGA11Q9Y5H2 PAPOLA-202ENST00000392990 2588 ntTSL 5 BASIC4.79□□□□□ -1.64
PCDHGA11Q9Y5H2 STON1-GTF2A1L-203ENST00000402114 3790 ntTSL 2 BASIC4.79□□□□□ -1.64
PCDHGA11Q9Y5H2 FLJ46284-201ENST00000504861 3421 ntTSL 2 BASIC4.79□□□□□ -1.64
PCDHGA11Q9Y5H2 MYBPC1-204ENST00000452455 3861 ntAPPRIS ALT2 TSL 2 BASIC4.79□□□□□ -1.64
PCDHGA11Q9Y5H2 ZNF705D-202ENST00000400085 3377 ntAPPRIS P1 TSL 5 BASIC4.79□□□□□ -1.64
PCDHGA11Q9Y5H2 RNU5F-3P-201ENST00000363767 117 ntBASIC4.79□□□□□ -1.64
PCDHGA11Q9Y5H2 SNORD113-1-201ENST00000365321 69 ntBASIC4.79□□□□□ -1.64
PCDHGA11Q9Y5H2 RNU6ATAC15P-201ENST00000408279 121 ntBASIC4.79□□□□□ -1.64
PCDHGA11Q9Y5H2 AC074117.2-201ENST00000417130 397 ntBASIC4.79□□□□□ -1.64
PCDHGA11Q9Y5H2 AL358075.3-201ENST00000426289 226 ntBASIC4.79□□□□□ -1.64
PCDHGA11Q9Y5H2 COX6B1P7-201ENST00000430845 235 ntBASIC4.79□□□□□ -1.64
PCDHGA11Q9Y5H2 AL158835.2-201ENST00000430970 300 ntTSL 2 BASIC4.79□□□□□ -1.64
PCDHGA11Q9Y5H2 POLR2KP2-201ENST00000438155 177 ntBASIC4.79□□□□□ -1.64
PCDHGA11Q9Y5H2 ATP2B2-IT1-201ENST00000440152 472 ntTSL 3 BASIC4.79□□□□□ -1.64
PCDHGA11Q9Y5H2 GPM6BP3-201ENST00000442797 145 ntBASIC4.79□□□□□ -1.64
PCDHGA11Q9Y5H2 AC110995.1-201ENST00000444185 628 ntTSL 3 BASIC4.79□□□□□ -1.64
PCDHGA11Q9Y5H2 AC091021.1-201ENST00000468051 388 ntBASIC4.79□□□□□ -1.64
PCDHGA11Q9Y5H2 RNA5SP249-201ENST00000516127 99 ntBASIC4.79□□□□□ -1.64
PCDHGA11Q9Y5H2 RNU6-567P-201ENST00000516746 107 ntBASIC4.79□□□□□ -1.64
PCDHGA11Q9Y5H2 RNU6-58P-201ENST00000517143 103 ntBASIC4.79□□□□□ -1.64
PCDHGA11Q9Y5H2 Y_RNA.719-201ENST00000517156 106 ntBASIC4.79□□□□□ -1.64
PCDHGA11Q9Y5H2 AC022559.1-201ENST00000520905 205 ntBASIC4.79□□□□□ -1.64
PCDHGA11Q9Y5H2 AC092490.3-201ENST00000545370 572 ntBASIC4.79□□□□□ -1.64
PCDHGA11Q9Y5H2 RMDN2-AS1-204ENST00000626669 448 ntTSL 5 BASIC4.79□□□□□ -1.64
PCDHGA11Q9Y5H2 IGHVIII-44-202ENST00000636235 289 ntBASIC4.79□□□□□ -1.64
PCDHGA11Q9Y5H2 U2.21-201ENST00000637295 81 ntBASIC4.79□□□□□ -1.64
PCDHGA11Q9Y5H2 OR9G1-202ENST00000642097 3611 ntAPPRIS P1 BASIC4.79□□□□□ -1.64
PCDHGA11Q9Y5H2 IPO5-201ENST00000261574 6003 ntTSL 1 (best) BASIC4.79□□□□□ -1.64
PCDHGA11Q9Y5H2 SALL4P2-201ENST00000423288 2910 ntBASIC4.79□□□□□ -1.64
PCDHGA11Q9Y5H2 FAM35BP-202ENST00000497389 3337 ntBASIC4.79□□□□□ -1.64
PCDHGA11Q9Y5H2 TOPORSLP1-203ENST00000493279 2871 ntTSL 4 BASIC4.79□□□□□ -1.64
PCDHGA11Q9Y5H2 ZNF28-203ENST00000438150 5171 ntTSL 2 BASIC4.78□□□□□ -1.64
PCDHGA11Q9Y5H2 WDR35-202ENST00000345530 6960 ntAPPRIS ALT1 TSL 1 (best) BASIC4.78□□□□□ -1.64
PCDHGA11Q9Y5H2 AC004803.1-201ENST00000503602 3207 ntTSL 1 (best) BASIC4.78□□□□□ -1.64
PCDHGA11Q9Y5H2 GPR85-201ENST00000297146 5079 ntAPPRIS P1 TSL 1 (best) BASIC4.78□□□□□ -1.64
PCDHGA11Q9Y5H2 PLCH1-201ENST00000334686 6128 ntAPPRIS P3 TSL 1 (best) BASIC4.78□□□□□ -1.64
PCDHGA11Q9Y5H2 AC018529.3-201ENST00000624212 2254 ntBASIC4.78□□□□□ -1.64
PCDHGA11Q9Y5H2 RNU6-778P-201ENST00000363269 103 ntBASIC4.78□□□□□ -1.64
PCDHGA11Q9Y5H2 Y_RNA.170-201ENST00000363746 110 ntBASIC4.78□□□□□ -1.64
PCDHGA11Q9Y5H2 Y_RNA.233-201ENST00000364407 101 ntBASIC4.78□□□□□ -1.64
PCDHGA11Q9Y5H2 RNU6-1175P-201ENST00000365200 107 ntBASIC4.78□□□□□ -1.64
PCDHGA11Q9Y5H2 RNU6-1145P-201ENST00000384246 107 ntBASIC4.78□□□□□ -1.64
PCDHGA11Q9Y5H2 MIR493-201ENST00000385254 89 ntBASIC4.78□□□□□ -1.64
PCDHGA11Q9Y5H2 HLFP1-201ENST00000402375 499 ntBASIC4.78□□□□□ -1.64
PCDHGA11Q9Y5H2 AC068287.1-201ENST00000430283 295 ntBASIC4.78□□□□□ -1.64
PCDHGA11Q9Y5H2 AL356535.1-201ENST00000440335 398 ntBASIC4.78□□□□□ -1.64
PCDHGA11Q9Y5H2 AP000844.1-201ENST00000446631 577 ntTSL 3 BASIC4.78□□□□□ -1.64
PCDHGA11Q9Y5H2 HMGB3P8-201ENST00000449709 577 ntBASIC4.78□□□□□ -1.64
Retrieved 100 of 98,524 protein–RNA pairs in 99 ms