Protein–RNA interactions for Protein: Q9Y5F2

PCDHB11, Protocadherin beta-11, humanhuman

Predictions only

Length 797 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHB11Q9Y5F2 AC044839.1-205ENST00000614989 542 ntTSL 5 BASIC4.92□□□□□ -1.62
PCDHB11Q9Y5F2 BX005214.3-202ENST00000619809 325 ntBASIC4.92□□□□□ -1.62
PCDHB11Q9Y5F2 AC024581.2-201ENST00000619986 252 ntBASIC4.92□□□□□ -1.62
PCDHB11Q9Y5F2 LGALS13-204ENST00000621475 494 ntAPPRIS ALT2 TSL 5 BASIC4.92□□□□□ -1.62
PCDHB11Q9Y5F2 MIR6810-201ENST00000622701 70 ntBASIC4.92□□□□□ -1.62
PCDHB11Q9Y5F2 NFIB-211ENST00000606230 2311 ntTSL 5 BASIC4.92□□□□□ -1.62
PCDHB11Q9Y5F2 LRRIQ3-204ENST00000395089 2673 ntAPPRIS P2 TSL 5 BASIC4.92□□□□□ -1.62
PCDHB11Q9Y5F2 MED23-203ENST00000368058 4576 ntTSL 5 BASIC4.92□□□□□ -1.62
PCDHB11Q9Y5F2 AC139713.2-214ENST00000642059 1811 ntBASIC4.92□□□□□ -1.62
PCDHB11Q9Y5F2 FSBP-203ENST00000611249 2181 ntAPPRIS P1 TSL 5 BASIC4.92□□□□□ -1.62
PCDHB11Q9Y5F2 PANK1-202ENST00000322191 2513 ntTSL 1 (best) BASIC4.92□□□□□ -1.62
PCDHB11Q9Y5F2 CDK14-203ENST00000406263 5163 ntAPPRIS ALT2 TSL 1 (best) BASIC4.92□□□□□ -1.62
PCDHB11Q9Y5F2 EFCAB3-202ENST00000450662 1694 ntTSL 5 BASIC4.92□□□□□ -1.62
PCDHB11Q9Y5F2 SYT14-206ENST00000537238 5208 ntAPPRIS ALT2 TSL 5 BASIC4.92□□□□□ -1.62
PCDHB11Q9Y5F2 CNTN6-205ENST00000446702 4513 ntAPPRIS P1 TSL 1 (best) BASIC4.92□□□□□ -1.62
PCDHB11Q9Y5F2 KIF2A-205ENST00000506857 2219 ntTSL 2 BASIC4.92□□□□□ -1.62
PCDHB11Q9Y5F2 DNAAF4-CCPG1-201ENST00000565113 4589 ntTSL 2 BASIC4.92□□□□□ -1.62
PCDHB11Q9Y5F2 RAP1GDS1-206ENST00000453712 2470 ntAPPRIS ALT1 TSL 1 (best) BASIC4.91□□□□□ -1.62
PCDHB11Q9Y5F2 ZNF660-201ENST00000322734 5834 ntAPPRIS P1 TSL 2 BASIC4.91□□□□□ -1.62
PCDHB11Q9Y5F2 INTU-201ENST00000335251 13233 ntAPPRIS P1 TSL 1 (best) BASIC4.91□□□□□ -1.62
PCDHB11Q9Y5F2 FGF13-202ENST00000315930 19519 ntAPPRIS P1 TSL 1 (best) BASIC4.91□□□□□ -1.62
PCDHB11Q9Y5F2 LRRC53-201ENST00000294635 3859 ntAPPRIS P1 TSL 5 BASIC4.91□□□□□ -1.62
PCDHB11Q9Y5F2 LUZP2-207ENST00000533227 5016 ntTSL 1 (best) BASIC4.91□□□□□ -1.62
PCDHB11Q9Y5F2 MS4A1-207ENST00000532073 2560 ntTSL 1 (best) BASIC4.91□□□□□ -1.62
PCDHB11Q9Y5F2 FMNL2-202ENST00000475377 3648 ntTSL 5 BASIC4.91□□□□□ -1.62
PCDHB11Q9Y5F2 RNA5SP87-201ENST00000384155 118 ntBASIC4.91□□□□□ -1.62
PCDHB11Q9Y5F2 RNU6-1181P-201ENST00000384191 106 ntBASIC4.91□□□□□ -1.62
PCDHB11Q9Y5F2 SNORA66-201ENST00000384792 133 ntBASIC4.91□□□□□ -1.62
PCDHB11Q9Y5F2 Y_RNA.597-201ENST00000410463 100 ntBASIC4.91□□□□□ -1.62
PCDHB11Q9Y5F2 AL590139.1-201ENST00000416267 400 ntBASIC4.91□□□□□ -1.62
PCDHB11Q9Y5F2 AL354714.3-201ENST00000447284 493 ntBASIC4.91□□□□□ -1.62
PCDHB11Q9Y5F2 RPL23AP3-201ENST00000453844 468 ntBASIC4.91□□□□□ -1.62
PCDHB11Q9Y5F2 RPS29P33-201ENST00000456717 146 ntBASIC4.91□□□□□ -1.62
PCDHB11Q9Y5F2 C10orf128-207ENST00000474718 614 ntAPPRIS P3 TSL 1 (best) BASIC4.91□□□□□ -1.62
PCDHB11Q9Y5F2 AC016598.2-201ENST00000514942 525 ntTSL 5 BASIC4.91□□□□□ -1.62
PCDHB11Q9Y5F2 AC012409.1-201ENST00000560176 358 ntTSL 3 BASIC4.91□□□□□ -1.62
PCDHB11Q9Y5F2 RPS4XP16-203ENST00000596904 698 ntTSL 5 BASIC4.91□□□□□ -1.62
PCDHB11Q9Y5F2 BPIFA4P-203ENST00000603168 689 ntBASIC4.91□□□□□ -1.62
PCDHB11Q9Y5F2 MIR7641-1-201ENST00000627518 61 ntBASIC4.91□□□□□ -1.62
PCDHB11Q9Y5F2 ELAVL2-202ENST00000380110 3691 ntTSL 5 BASIC4.91□□□□□ -1.62
PCDHB11Q9Y5F2 RIF1-203ENST00000428287 7722 ntAPPRIS ALT2 TSL 1 (best) BASIC4.91□□□□□ -1.62
PCDHB11Q9Y5F2 SMC2-203ENST00000374793 5909 ntAPPRIS P1 TSL 1 (best) BASIC4.91□□□□□ -1.62
PCDHB11Q9Y5F2 FAM197Y3-202ENST00000427622 2325 ntTSL 5 BASIC4.91□□□□□ -1.62
PCDHB11Q9Y5F2 FAM197Y7-202ENST00000433321 2325 ntTSL 2 BASIC4.91□□□□□ -1.62
PCDHB11Q9Y5F2 GABRG2-224ENST00000640574 3150 ntTSL 5 BASIC4.91□□□□□ -1.62
PCDHB11Q9Y5F2 LINS1-201ENST00000314742 4821 ntAPPRIS P1 TSL 5 BASIC4.91□□□□□ -1.62
PCDHB11Q9Y5F2 CASC1-203ENST00000395987 2363 ntAPPRIS P3 TSL 1 (best) BASIC4.91□□□□□ -1.62
PCDHB11Q9Y5F2 CROT-204ENST00000442291 1993 ntTSL 5 BASIC4.91□□□□□ -1.62
PCDHB11Q9Y5F2 PTPN22-203ENST00000460620 1794 ntTSL 1 (best) BASIC4.91□□□□□ -1.62
PCDHB11Q9Y5F2 NRG1-220ENST00000539990 2401 ntTSL 2 BASIC4.91□□□□□ -1.62
PCDHB11Q9Y5F2 R3HDM1-201ENST00000264160 4648 ntAPPRIS P3 TSL 1 (best) BASIC4.9□□□□□ -1.62
PCDHB11Q9Y5F2 FILIP1-202ENST00000370020 4051 ntTSL 1 (best) BASIC4.9□□□□□ -1.62
PCDHB11Q9Y5F2 ZBBX-202ENST00000392764 2849 ntAPPRIS ALT2 TSL 1 (best) BASIC4.9□□□□□ -1.62
PCDHB11Q9Y5F2 DNAH6-202ENST00000389394 12795 ntAPPRIS P1 TSL 5 BASIC4.9□□□□□ -1.62
PCDHB11Q9Y5F2 Y_RNA.262-201ENST00000364641 102 ntBASIC4.9□□□□□ -1.63
PCDHB11Q9Y5F2 HLFP1-201ENST00000402375 499 ntBASIC4.9□□□□□ -1.63
PCDHB11Q9Y5F2 RPS16P5-201ENST00000406501 404 ntBASIC4.9□□□□□ -1.63
PCDHB11Q9Y5F2 OOSP1P1-201ENST00000423265 274 ntBASIC4.9□□□□□ -1.63
PCDHB11Q9Y5F2 SETP5-201ENST00000437270 562 ntBASIC4.9□□□□□ -1.63
PCDHB11Q9Y5F2 AC073218.1-201ENST00000458413 171 ntTSL 5 BASIC4.9□□□□□ -1.63
PCDHB11Q9Y5F2 RN7SL441P-201ENST00000492388 296 ntBASIC4.9□□□□□ -1.63
PCDHB11Q9Y5F2 RNU6-58P-201ENST00000517143 103 ntBASIC4.9□□□□□ -1.63
PCDHB11Q9Y5F2 AC027801.4-201ENST00000518420 395 ntTSL 5 BASIC4.9□□□□□ -1.63
PCDHB11Q9Y5F2 AC022915.1-201ENST00000521660 289 ntTSL 3 BASIC4.9□□□□□ -1.63
PCDHB11Q9Y5F2 AP003128.1-201ENST00000531414 448 ntTSL 2 BASIC4.9□□□□□ -1.63
PCDHB11Q9Y5F2 MIR4691-201ENST00000583764 85 ntBASIC4.9□□□□□ -1.63
PCDHB11Q9Y5F2 AL138963.2-201ENST00000605137 226 ntBASIC4.9□□□□□ -1.63
PCDHB11Q9Y5F2 AC135050.6-201ENST00000610813 528 ntTSL 3 BASIC4.9□□□□□ -1.63
PCDHB11Q9Y5F2 uc_338.18-201ENST00000615451 175 ntBASIC4.9□□□□□ -1.63
PCDHB11Q9Y5F2 AP000346.3-201ENST00000622821 210 ntBASIC4.9□□□□□ -1.63
PCDHB11Q9Y5F2 MTND1P7-201ENST00000632801 297 ntBASIC4.9□□□□□ -1.63
PCDHB11Q9Y5F2 MRPL42-202ENST00000393128 1983 ntAPPRIS ALT1 TSL 3 BASIC4.9□□□□□ -1.63
PCDHB11Q9Y5F2 SMG1P3-204ENST00000520823 3194 ntTSL 5 BASIC4.9□□□□□ -1.63
PCDHB11Q9Y5F2 POU2F1-206ENST00000429375 13651 ntAPPRIS ALT2 TSL 2 BASIC4.9□□□□□ -1.63
PCDHB11Q9Y5F2 WDR5B-201ENST00000330689 3720 ntAPPRIS P1 BASIC4.9□□□□□ -1.63
PCDHB11Q9Y5F2 AC104793.1-201ENST00000508189 2840 ntTSL 2 BASIC4.9□□□□□ -1.63
PCDHB11Q9Y5F2 MALRD1-204ENST00000454679 6880 ntAPPRIS P1 TSL 1 (best) BASIC4.9□□□□□ -1.63
PCDHB11Q9Y5F2 RNF182-207ENST00000537663 3382 ntAPPRIS P1 TSL 4 BASIC4.9□□□□□ -1.63
PCDHB11Q9Y5F2 FZD6-205ENST00000522566 3719 ntAPPRIS P1 TSL 1 (best) BASIC4.89□□□□□ -1.63
PCDHB11Q9Y5F2 CLDND1-208ENST00000503004 2818 ntAPPRIS P1 TSL 1 (best) BASIC4.89□□□□□ -1.63
PCDHB11Q9Y5F2 AK9-201ENST00000285397 2566 ntTSL 1 (best) BASIC4.89□□□□□ -1.63
PCDHB11Q9Y5F2 Y_RNA.217-201ENST00000364214 105 ntBASIC4.89□□□□□ -1.63
PCDHB11Q9Y5F2 RNU6-898P-201ENST00000365627 104 ntBASIC4.89□□□□□ -1.63
PCDHB11Q9Y5F2 MIR124-3-201ENST00000384866 87 ntBASIC4.89□□□□□ -1.63
PCDHB11Q9Y5F2 CTSL3P-202ENST00000412179 788 ntBASIC4.89□□□□□ -1.63
PCDHB11Q9Y5F2 AC092047.1-201ENST00000424997 240 ntBASIC4.89□□□□□ -1.63
PCDHB11Q9Y5F2 UBE3A-203ENST00000428984 2986 ntAPPRIS P3 TSL 5 BASIC4.89□□□□□ -1.63
PCDHB11Q9Y5F2 AC122136.1-201ENST00000443971 478 ntTSL 3 BASIC4.89□□□□□ -1.63
PCDHB11Q9Y5F2 AC112498.1-201ENST00000444401 332 ntBASIC4.89□□□□□ -1.63
PCDHB11Q9Y5F2 AL356421.2-201ENST00000446733 197 ntTSL 3 BASIC4.89□□□□□ -1.63
PCDHB11Q9Y5F2 MTATP6P7-201ENST00000453315 681 ntBASIC4.89□□□□□ -1.63
PCDHB11Q9Y5F2 Y_RNA.641-201ENST00000459414 105 ntBASIC4.89□□□□□ -1.63
PCDHB11Q9Y5F2 RPL23AP14-201ENST00000468281 468 ntBASIC4.89□□□□□ -1.63
PCDHB11Q9Y5F2 RNU6-1198P-201ENST00000516904 67 ntBASIC4.89□□□□□ -1.63
PCDHB11Q9Y5F2 AC022784.7-201ENST00000520017 651 ntTSL 3 BASIC4.89□□□□□ -1.63
PCDHB11Q9Y5F2 AC107973.1-201ENST00000530249 576 ntTSL 4 BASIC4.89□□□□□ -1.63
PCDHB11Q9Y5F2 SNHG14-219ENST00000553134 470 ntTSL 2 BASIC4.89□□□□□ -1.63
PCDHB11Q9Y5F2 MIR5571-201ENST00000577998 113 ntBASIC4.89□□□□□ -1.63
PCDHB11Q9Y5F2 AC005176.2-201ENST00000596933 147 ntBASIC4.89□□□□□ -1.63
PCDHB11Q9Y5F2 AC005828.6-201ENST00000606610 232 ntBASIC4.89□□□□□ -1.63
Retrieved 100 of 98,524 protein–RNA pairs in 109.4 ms