Protein–RNA interactions for Protein: Q9Y5E6

PCDHB3, Protocadherin beta-3, humanhuman

Predictions only

Length 796 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHB3Q9Y5E6 RN7SKP284-201ENST00000411002 343 ntBASIC5.25□□□□□ -1.57
PCDHB3Q9Y5E6 RN7SKP53-201ENST00000411337 315 ntBASIC5.25□□□□□ -1.57
PCDHB3Q9Y5E6 OR2AM1P-201ENST00000422137 422 ntBASIC5.25□□□□□ -1.57
PCDHB3Q9Y5E6 AC007161.1-204ENST00000423039 460 ntBASIC5.25□□□□□ -1.57
PCDHB3Q9Y5E6 LINC00459-201ENST00000431656 376 ntTSL 2 BASIC5.25□□□□□ -1.57
PCDHB3Q9Y5E6 RPS11P7-201ENST00000442125 465 ntBASIC5.25□□□□□ -1.57
PCDHB3Q9Y5E6 AC245047.8-201ENST00000456455 284 ntBASIC5.25□□□□□ -1.57
PCDHB3Q9Y5E6 RPSAP50-201ENST00000481955 852 ntBASIC5.25□□□□□ -1.57
PCDHB3Q9Y5E6 AC008517.1-201ENST00000502383 585 ntTSL 4 BASIC5.25□□□□□ -1.57
PCDHB3Q9Y5E6 UBE2CP3-201ENST00000502715 450 ntBASIC5.25□□□□□ -1.57
PCDHB3Q9Y5E6 ENPP7P11-201ENST00000505915 627 ntBASIC5.25□□□□□ -1.57
PCDHB3Q9Y5E6 CR936218.1-201ENST00000570454 304 ntTSL 2 BASIC5.25□□□□□ -1.57
PCDHB3Q9Y5E6 AC005255.1-201ENST00000593748 216 ntBASIC5.25□□□□□ -1.57
PCDHB3Q9Y5E6 MIR6798-201ENST00000612887 67 ntBASIC5.25□□□□□ -1.57
PCDHB3Q9Y5E6 snoZ196.1-201ENST00000625269 89 ntBASIC5.25□□□□□ -1.57
PCDHB3Q9Y5E6 ZNF83-202ENST00000536937 2726 ntAPPRIS P1 TSL 2 BASIC5.25□□□□□ -1.57
PCDHB3Q9Y5E6 CDC42BPA-204ENST00000366767 9320 ntTSL 1 (best) BASIC5.25□□□□□ -1.57
PCDHB3Q9Y5E6 MROH9-202ENST00000367759 3165 ntAPPRIS ALT2 TSL 5 BASIC5.25□□□□□ -1.57
PCDHB3Q9Y5E6 PRLR-220ENST00000620785 11063 ntTSL 5 BASIC5.25□□□□□ -1.57
PCDHB3Q9Y5E6 ZNF230-201ENST00000429154 4115 ntAPPRIS P1 TSL 1 (best) BASIC5.25□□□□□ -1.57
PCDHB3Q9Y5E6 ZNF418-205ENST00000595830 3543 ntAPPRIS P3 TSL 1 (best) BASIC5.25□□□□□ -1.57
PCDHB3Q9Y5E6 VWC2L-202ENST00000427124 4480 ntTSL 1 (best) BASIC5.25□□□□□ -1.57
PCDHB3Q9Y5E6 GPRC6A-203ENST00000530250 2310 ntTSL 1 (best) BASIC5.25□□□□□ -1.57
PCDHB3Q9Y5E6 DNA2-201ENST00000358410 4208 ntAPPRIS P1 TSL 1 (best) BASIC5.25□□□□□ -1.57
PCDHB3Q9Y5E6 ZNF780A-204ENST00000455521 3600 ntAPPRIS ALT2 TSL 5 BASIC5.25□□□□□ -1.57
PCDHB3Q9Y5E6 OR8J2-201ENST00000641465 2883 ntAPPRIS P1 BASIC5.25□□□□□ -1.57
PCDHB3Q9Y5E6 FAM196B-201ENST00000377365 2999 ntAPPRIS P1 TSL 2 BASIC5.25□□□□□ -1.57
PCDHB3Q9Y5E6 ASNSP1-201ENST00000518311 1939 ntBASIC5.25□□□□□ -1.57
PCDHB3Q9Y5E6 SESN1-201ENST00000302071 2718 ntTSL 1 (best) BASIC5.25□□□□□ -1.57
PCDHB3Q9Y5E6 KAT6B-201ENST00000287239 8287 ntAPPRIS P3 TSL 1 (best) BASIC5.24□□□□□ -1.57
PCDHB3Q9Y5E6 KRR1-201ENST00000229214 10118 ntAPPRIS P1 TSL 1 (best) BASIC5.24□□□□□ -1.57
PCDHB3Q9Y5E6 GPALPP1-201ENST00000357537 5368 ntTSL 1 (best) BASIC5.24□□□□□ -1.57
PCDHB3Q9Y5E6 GLCE-201ENST00000261858 5037 ntAPPRIS P1 TSL 1 (best) BASIC5.24□□□□□ -1.57
PCDHB3Q9Y5E6 TNRC6B-201ENST00000301923 15958 ntAPPRIS P3 TSL 5 BASIC5.24□□□□□ -1.57
PCDHB3Q9Y5E6 AC099654.7-201ENST00000635788 2127 ntBASIC5.24□□□□□ -1.57
PCDHB3Q9Y5E6 ABI1-210ENST00000376170 3362 ntTSL 1 (best) BASIC5.24□□□□□ -1.57
PCDHB3Q9Y5E6 PARPBP-201ENST00000327680 3014 ntAPPRIS P1 TSL 2 BASIC5.24□□□□□ -1.57
PCDHB3Q9Y5E6 ENPP3-202ENST00000358229 3026 ntTSL 1 (best) BASIC5.24□□□□□ -1.57
PCDHB3Q9Y5E6 SRRM1-202ENST00000374389 3110 ntAPPRIS ALT2 TSL 5 BASIC5.24□□□□□ -1.57
PCDHB3Q9Y5E6 GHR-210ENST00000615111 4814 ntAPPRIS P1 TSL 5 BASIC5.24□□□□□ -1.57
PCDHB3Q9Y5E6 CROT-204ENST00000442291 1993 ntTSL 5 BASIC5.24□□□□□ -1.57
PCDHB3Q9Y5E6 OTOGL-204ENST00000547103 8032 ntAPPRIS ALT2 TSL 5 BASIC5.24□□□□□ -1.57
PCDHB3Q9Y5E6 ZNF644-212ENST00000621077 2056 ntTSL 5 BASIC5.24□□□□□ -1.57
PCDHB3Q9Y5E6 AMY1C-201ENST00000370079 1632 ntAPPRIS P1 TSL 1 (best) BASIC5.24□□□□□ -1.57
PCDHB3Q9Y5E6 AC010329.5-201ENST00000623497 2174 ntBASIC5.24□□□□□ -1.57
PCDHB3Q9Y5E6 OR2J3-202ENST00000641151 3297 ntAPPRIS P1 BASIC5.24□□□□□ -1.57
PCDHB3Q9Y5E6 RNA5SP335-201ENST00000363817 110 ntBASIC5.24□□□□□ -1.57
PCDHB3Q9Y5E6 RNU1-140P-201ENST00000365040 165 ntBASIC5.24□□□□□ -1.57
PCDHB3Q9Y5E6 Y_RNA.495-201ENST00000384435 112 ntBASIC5.24□□□□□ -1.57
PCDHB3Q9Y5E6 SNORD56.6-201ENST00000384569 71 ntBASIC5.24□□□□□ -1.57
PCDHB3Q9Y5E6 MIR15B-201ENST00000385045 98 ntBASIC5.24□□□□□ -1.57
PCDHB3Q9Y5E6 FTH1P6-201ENST00000430768 320 ntBASIC5.24□□□□□ -1.57
PCDHB3Q9Y5E6 TDGF1P1-201ENST00000445734 527 ntBASIC5.24□□□□□ -1.57
PCDHB3Q9Y5E6 AL451050.1-201ENST00000450126 415 ntBASIC5.24□□□□□ -1.57
PCDHB3Q9Y5E6 NHS-AS1-201ENST00000452788 366 ntTSL 3 BASIC5.24□□□□□ -1.57
PCDHB3Q9Y5E6 AP000705.1-201ENST00000454567 350 ntBASIC5.24□□□□□ -1.57
PCDHB3Q9Y5E6 RN7SL826P-201ENST00000479724 288 ntBASIC5.24□□□□□ -1.57
PCDHB3Q9Y5E6 MORC1-AS1-201ENST00000480826 564 ntTSL 2 BASIC5.24□□□□□ -1.57
PCDHB3Q9Y5E6 AC092666.1-201ENST00000492054 573 ntTSL 4 BASIC5.24□□□□□ -1.57
PCDHB3Q9Y5E6 AC126177.5-201ENST00000549599 178 ntBASIC5.24□□□□□ -1.57
PCDHB3Q9Y5E6 AC040958.1-201ENST00000561102 201 ntBASIC5.24□□□□□ -1.57
PCDHB3Q9Y5E6 AP005271.1-201ENST00000582470 412 ntTSL 3 BASIC5.24□□□□□ -1.57
PCDHB3Q9Y5E6 AC108738.1-201ENST00000603703 237 ntBASIC5.24□□□□□ -1.57
PCDHB3Q9Y5E6 AL391903.3-201ENST00000612158 163 ntBASIC5.24□□□□□ -1.57
PCDHB3Q9Y5E6 AL391261.4-201ENST00000616012 481 ntBASIC5.24□□□□□ -1.57
PCDHB3Q9Y5E6 MESTIT1_1.1-201ENST00000618871 140 ntBASIC5.24□□□□□ -1.57
PCDHB3Q9Y5E6 MUCL1-205ENST00000619042 243 ntAPPRIS ALT2 TSL 5 BASIC5.24□□□□□ -1.57
PCDHB3Q9Y5E6 AC068870.2-201ENST00000620635 389 ntBASIC5.24□□□□□ -1.57
PCDHB3Q9Y5E6 MIR3674-201ENST00000636576 68 ntBASIC5.24□□□□□ -1.57
PCDHB3Q9Y5E6 Z94721.2-201ENST00000609590 5310 ntTSL 2 BASIC5.24□□□□□ -1.57
PCDHB3Q9Y5E6 FAM46D-202ENST00000538312 3106 ntAPPRIS P1 TSL 2 BASIC5.24□□□□□ -1.57
PCDHB3Q9Y5E6 PRUNE2-207ENST00000428286 12437 ntTSL 5 BASIC5.24□□□□□ -1.57
PCDHB3Q9Y5E6 TCF4-281ENST00000636822 7640 ntTSL 5 BASIC5.24□□□□□ -1.57
PCDHB3Q9Y5E6 UBE3A-203ENST00000428984 2986 ntAPPRIS P3 TSL 5 BASIC5.23□□□□□ -1.57
PCDHB3Q9Y5E6 DPP8-210ENST00000559233 2953 ntAPPRIS P4 TSL 2 BASIC5.23□□□□□ -1.57
PCDHB3Q9Y5E6 FRYL-209ENST00000506685 1940 ntTSL 5 BASIC5.23□□□□□ -1.57
PCDHB3Q9Y5E6 MCM9-209ENST00000619706 4822 ntAPPRIS P1 TSL 5 BASIC5.23□□□□□ -1.57
PCDHB3Q9Y5E6 ESRRG-202ENST00000360012 5431 ntAPPRIS P1 TSL 1 (best) BASIC5.23□□□□□ -1.57
PCDHB3Q9Y5E6 OR8K3-203ENST00000641662 2438 ntAPPRIS P1 BASIC5.23□□□□□ -1.57
PCDHB3Q9Y5E6 LINC01748-204ENST00000635048 5678 ntTSL 5 BASIC5.23□□□□□ -1.57
PCDHB3Q9Y5E6 FOXP1-IT1-201ENST00000498714 3539 ntTSL 2 BASIC5.23□□□□□ -1.57
PCDHB3Q9Y5E6 OR1E2-201ENST00000248384 972 ntAPPRIS P1 BASIC5.23□□□□□ -1.57
PCDHB3Q9Y5E6 RNU6-942P-201ENST00000363002 107 ntBASIC5.23□□□□□ -1.57
PCDHB3Q9Y5E6 RNU6-324P-201ENST00000363957 106 ntBASIC5.23□□□□□ -1.57
PCDHB3Q9Y5E6 Y_RNA.287-201ENST00000364853 94 ntBASIC5.23□□□□□ -1.57
PCDHB3Q9Y5E6 LINC00894-203ENST00000432696 298 ntTSL 1 (best) BASIC5.23□□□□□ -1.57
PCDHB3Q9Y5E6 AL445524.1-202ENST00000440665 416 ntTSL 3 BASIC5.23□□□□□ -1.57
PCDHB3Q9Y5E6 HSPE1P13-201ENST00000451143 297 ntBASIC5.23□□□□□ -1.57
PCDHB3Q9Y5E6 AL353742.1-201ENST00000453455 224 ntTSL 3 BASIC5.23□□□□□ -1.57
PCDHB3Q9Y5E6 AC146507.2-201ENST00000460608 476 ntBASIC5.23□□□□□ -1.57
PCDHB3Q9Y5E6 SNRPGP7-201ENST00000469016 106 ntBASIC5.23□□□□□ -1.57
PCDHB3Q9Y5E6 KC877373.1-201ENST00000479066 408 ntBASIC5.23□□□□□ -1.57
PCDHB3Q9Y5E6 AC055733.2-201ENST00000504737 340 ntTSL 2 BASIC5.23□□□□□ -1.57
PCDHB3Q9Y5E6 SNORD33.1-201ENST00000516213 88 ntBASIC5.23□□□□□ -1.57
PCDHB3Q9Y5E6 AP001266.2-201ENST00000534505 464 ntTSL 4 BASIC5.23□□□□□ -1.57
PCDHB3Q9Y5E6 HSPE1P4-201ENST00000550617 308 ntBASIC5.23□□□□□ -1.57
PCDHB3Q9Y5E6 CYCSP39-201ENST00000565821 309 ntBASIC5.23□□□□□ -1.57
PCDHB3Q9Y5E6 AC006380.1-201ENST00000603598 186 ntBASIC5.23□□□□□ -1.57
PCDHB3Q9Y5E6 Hammerhead_HH10.1-201ENST00000620658 125 ntBASIC5.23□□□□□ -1.57
PCDHB3Q9Y5E6 hsa-mir-548d-1.1-201ENST00000636914 97 ntBASIC5.23□□□□□ -1.57
Retrieved 100 of 98,524 protein–RNA pairs in 106.6 ms