Protein–RNA interactions for Protein: Q9P244

LRFN1, Leucine-rich repeat and fibronectin type III domain-containing protein 1, humanhuman

Predictions only

Length 771 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LRFN1Q9P244 IL7-206ENST00000520269 456 ntTSL 3 BASIC3.35□□□□□ -1.87
LRFN1Q9P244 AP002892.1-201ENST00000537727 550 ntTSL 4 BASIC3.35□□□□□ -1.87
LRFN1Q9P244 BNIP3P6-201ENST00000549284 499 ntBASIC3.35□□□□□ -1.87
LRFN1Q9P244 LINC00933-203ENST00000559812 219 ntBASIC3.35□□□□□ -1.87
LRFN1Q9P244 AC021739.4-201ENST00000561417 569 ntTSL 4 BASIC3.35□□□□□ -1.87
LRFN1Q9P244 LINC01290-201ENST00000566787 502 ntTSL 2 BASIC3.35□□□□□ -1.87
LRFN1Q9P244 MIR3941-201ENST00000582572 103 ntBASIC3.35□□□□□ -1.87
LRFN1Q9P244 MIR5195-201ENST00000583555 115 ntBASIC3.35□□□□□ -1.87
LRFN1Q9P244 AC027045.1-201ENST00000609065 202 ntTSL 5 BASIC3.35□□□□□ -1.87
LRFN1Q9P244 AL355073.2-201ENST00000612106 557 ntBASIC3.35□□□□□ -1.87
LRFN1Q9P244 RDM1-219ENST00000615378 542 ntTSL 3 BASIC3.35□□□□□ -1.87
LRFN1Q9P244 AC244517.5-202ENST00000623741 500 ntTSL 3 BASIC3.35□□□□□ -1.87
LRFN1Q9P244 ROCK2-203ENST00000401753 4017 ntTSL 1 (best) BASIC3.35□□□□□ -1.87
LRFN1Q9P244 MME-211ENST00000492661 2854 ntAPPRIS P1 TSL 2 BASIC3.35□□□□□ -1.87
LRFN1Q9P244 DCUN1D1-201ENST00000292782 7954 ntAPPRIS P1 TSL 1 (best) BASIC3.35□□□□□ -1.87
LRFN1Q9P244 DDX60L-207ENST00000505890 4568 ntTSL 2 BASIC3.35□□□□□ -1.87
LRFN1Q9P244 PRB2-201ENST00000389362 1429 ntAPPRIS P2 TSL 5 BASIC3.35□□□□□ -1.87
LRFN1Q9P244 CDC27P3-201ENST00000635418 1910 ntBASIC3.34□□□□□ -1.87
LRFN1Q9P244 FZD3-201ENST00000240093 13736 ntAPPRIS P1 TSL 1 (best) BASIC3.34□□□□□ -1.87
LRFN1Q9P244 AC007823.1-201ENST00000569932 1566 ntBASIC3.34□□□□□ -1.87
LRFN1Q9P244 ADGRV1-201ENST00000405460 19557 ntAPPRIS P1 TSL 1 (best) BASIC3.34□□□□□ -1.87
LRFN1Q9P244 HERC5-203ENST00000508159 2243 ntTSL 2 BASIC3.34□□□□□ -1.87
LRFN1Q9P244 SNORD9-201ENST00000362566 104 ntBASIC3.34□□□□□ -1.87
LRFN1Q9P244 Y_RNA.88-201ENST00000363029 99 ntBASIC3.34□□□□□ -1.87
LRFN1Q9P244 RNU6-82P-201ENST00000363970 107 ntBASIC3.34□□□□□ -1.87
LRFN1Q9P244 AIF1-202ENST00000376049 524 ntTSL 1 (best) BASIC3.34□□□□□ -1.87
LRFN1Q9P244 Y_RNA.390-201ENST00000383932 102 ntBASIC3.34□□□□□ -1.87
LRFN1Q9P244 CYCSP33-201ENST00000414485 327 ntBASIC3.34□□□□□ -1.87
LRFN1Q9P244 AP000907.1-201ENST00000428428 510 ntBASIC3.34□□□□□ -1.87
LRFN1Q9P244 AL158071.1-201ENST00000430315 461 ntBASIC3.34□□□□□ -1.87
LRFN1Q9P244 IGKV1OR9-2-201ENST00000431378 277 ntBASIC3.34□□□□□ -1.87
LRFN1Q9P244 AC005160.1-201ENST00000432405 381 ntTSL 3 BASIC3.34□□□□□ -1.87
LRFN1Q9P244 AL138916.1-201ENST00000436295 455 ntTSL 3 BASIC3.34□□□□□ -1.87
LRFN1Q9P244 PRPS1P1-201ENST00000445305 876 ntBASIC3.34□□□□□ -1.87
LRFN1Q9P244 WASF1P1-201ENST00000447560 1131 ntBASIC3.34□□□□□ -1.87
LRFN1Q9P244 MTND3P16-201ENST00000452205 344 ntBASIC3.34□□□□□ -1.87
LRFN1Q9P244 RNU7-167P-201ENST00000459160 62 ntBASIC3.34□□□□□ -1.87
LRFN1Q9P244 RPL31P58-201ENST00000469001 379 ntBASIC3.34□□□□□ -1.87
LRFN1Q9P244 RN7SL330P-201ENST00000469709 307 ntBASIC3.34□□□□□ -1.87
LRFN1Q9P244 RPS29P25-201ENST00000481709 171 ntBASIC3.34□□□□□ -1.87
LRFN1Q9P244 AC092666.1-202ENST00000493400 442 ntTSL 2 BASIC3.34□□□□□ -1.87
LRFN1Q9P244 PTPRG-AS1-210ENST00000498655 547 ntTSL 4 BASIC3.34□□□□□ -1.87
LRFN1Q9P244 PRDX4P1-201ENST00000507189 574 ntBASIC3.34□□□□□ -1.87
LRFN1Q9P244 LINC02061-201ENST00000514225 335 ntTSL 3 BASIC3.34□□□□□ -1.87
LRFN1Q9P244 AC005908.2-201ENST00000546078 530 ntTSL 3 BASIC3.34□□□□□ -1.87
LRFN1Q9P244 AC021739.1-201ENST00000559631 174 ntBASIC3.34□□□□□ -1.87
LRFN1Q9P244 AC025281.1-201ENST00000567026 265 ntBASIC3.34□□□□□ -1.87
LRFN1Q9P244 AC010653.1-201ENST00000571108 881 ntBASIC3.34□□□□□ -1.87
LRFN1Q9P244 CCDC178-211ENST00000581852 876 ntAPPRIS ALT2 TSL 2 BASIC3.34□□□□□ -1.87
LRFN1Q9P244 AC002553.4-201ENST00000616896 331 ntBASIC3.34□□□□□ -1.87
LRFN1Q9P244 MIR7975-201ENST00000619350 68 ntBASIC3.34□□□□□ -1.87
LRFN1Q9P244 PCNP-208ENST00000627393 136 ntTSL 2 BASIC3.34□□□□□ -1.87
LRFN1Q9P244 AC110079.1-202ENST00000635213 138 ntBASIC3.34□□□□□ -1.87
LRFN1Q9P244 GEN1-201ENST00000317402 9854 ntAPPRIS P1 TSL 2 BASIC3.34□□□□□ -1.88
LRFN1Q9P244 OR4G1P-203ENST00000641984 1631 ntBASIC3.33□□□□□ -1.88
LRFN1Q9P244 AC108750.1-201ENST00000637986 2706 ntAPPRIS P1 TSL 4 BASIC3.33□□□□□ -1.88
LRFN1Q9P244 Y_RNA.231-201ENST00000364358 102 ntBASIC3.33□□□□□ -1.88
LRFN1Q9P244 Y_RNA.480-201ENST00000384364 102 ntBASIC3.33□□□□□ -1.88
LRFN1Q9P244 RNA5SP31-201ENST00000411144 127 ntBASIC3.33□□□□□ -1.88
LRFN1Q9P244 OR9R1P-201ENST00000412200 877 ntBASIC3.33□□□□□ -1.88
LRFN1Q9P244 AC079150.1-201ENST00000413043 383 ntTSL 3 BASIC3.33□□□□□ -1.88
LRFN1Q9P244 ARL5AP1-201ENST00000418991 388 ntBASIC3.33□□□□□ -1.88
LRFN1Q9P244 RPS27P26-201ENST00000494583 239 ntBASIC3.33□□□□□ -1.88
LRFN1Q9P244 LINC02110-201ENST00000503870 546 ntTSL 3 BASIC3.33□□□□□ -1.88
LRFN1Q9P244 AC114316.1-201ENST00000511323 278 ntTSL 5 BASIC3.33□□□□□ -1.88
LRFN1Q9P244 RN7SKP209-201ENST00000516888 304 ntBASIC3.33□□□□□ -1.88
LRFN1Q9P244 CENPUP1-201ENST00000526649 1202 ntBASIC3.33□□□□□ -1.88
LRFN1Q9P244 MRPL51-203ENST00000538814 501 ntTSL 2 BASIC3.33□□□□□ -1.88
LRFN1Q9P244 AC090115.3-201ENST00000553218 849 ntBASIC3.33□□□□□ -1.88
LRFN1Q9P244 OR11H5P-201ENST00000554039 926 ntBASIC3.33□□□□□ -1.88
LRFN1Q9P244 AC079203.2-201ENST00000559867 387 ntTSL 2 BASIC3.33□□□□□ -1.88
LRFN1Q9P244 AC104564.2-201ENST00000581240 270 ntTSL 3 BASIC3.33□□□□□ -1.88
LRFN1Q9P244 AC098617.1-215ENST00000594798 1152 ntTSL 5 BASIC3.33□□□□□ -1.88
LRFN1Q9P244 AC087045.1-201ENST00000605856 382 ntBASIC3.33□□□□□ -1.88
LRFN1Q9P244 MIR7851-201ENST00000610611 160 ntBASIC3.33□□□□□ -1.88
LRFN1Q9P244 U2.17-201ENST00000611454 95 ntBASIC3.33□□□□□ -1.88
LRFN1Q9P244 AC010722.1-201ENST00000622595 582 ntTSL 5 BASIC3.33□□□□□ -1.88
LRFN1Q9P244 AL031601.2-202ENST00000622650 282 ntBASIC3.33□□□□□ -1.88
LRFN1Q9P244 MIR3199-2-201ENST00000636243 86 ntBASIC3.33□□□□□ -1.88
LRFN1Q9P244 FOXP2-227ENST00000638397 240 ntTSL 5 BASIC3.33□□□□□ -1.88
LRFN1Q9P244 USP9Y-201ENST00000338981 10036 ntAPPRIS P1 TSL 1 (best) BASIC3.33□□□□□ -1.88
LRFN1Q9P244 AGL-206ENST00000370165 7106 ntAPPRIS P1 TSL 1 (best) BASIC3.33□□□□□ -1.88
LRFN1Q9P244 KLRA1P-202ENST00000510134 1410 ntTSL 5 BASIC3.33□□□□□ -1.88
LRFN1Q9P244 ZBED5-201ENST00000413761 2512 ntAPPRIS P1 TSL 1 (best) BASIC3.33□□□□□ -1.88
LRFN1Q9P244 SYNE2-212ENST00000554584 20508 ntTSL 5 BASIC3.33□□□□□ -1.88
LRFN1Q9P244 FIGNL1-203ENST00000419119 3700 ntAPPRIS P1 TSL 1 (best) BASIC3.33□□□□□ -1.88
LRFN1Q9P244 IQCH-201ENST00000335894 4208 ntAPPRIS P1 TSL 1 (best) BASIC3.32□□□□□ -1.88
LRFN1Q9P244 CCDC110-202ENST00000393540 2722 ntAPPRIS ALT2 TSL 1 (best) BASIC3.32□□□□□ -1.88
LRFN1Q9P244 RBBP8-202ENST00000360790 2962 ntTSL 1 (best) BASIC3.32□□□□□ -1.88
LRFN1Q9P244 FNDC3A-202ENST00000398316 5714 ntTSL 1 (best) BASIC3.32□□□□□ -1.88
LRFN1Q9P244 LRRTM2-201ENST00000274711 6017 ntAPPRIS P1 TSL 1 (best) BASIC3.32□□□□□ -1.88
LRFN1Q9P244 AC006504.1-201ENST00000562493 3666 ntBASIC3.32□□□□□ -1.88
LRFN1Q9P244 GSTA3-201ENST00000211122 902 ntAPPRIS P1 TSL 1 (best) BASIC3.32□□□□□ -1.88
LRFN1Q9P244 RNU4-66P-201ENST00000365199 138 ntBASIC3.32□□□□□ -1.88
LRFN1Q9P244 MIR10A-201ENST00000385043 110 ntBASIC3.32□□□□□ -1.88
LRFN1Q9P244 MIR767-201ENST00000390228 109 ntBASIC3.32□□□□□ -1.88
LRFN1Q9P244 TRAJ21-201ENST00000390516 55 ntAPPRIS P1 BASIC3.32□□□□□ -1.88
LRFN1Q9P244 NDUFB4P4-201ENST00000404822 243 ntBASIC3.32□□□□□ -1.88
LRFN1Q9P244 OFD1P1Y-201ENST00000411756 1225 ntBASIC3.32□□□□□ -1.88
LRFN1Q9P244 BX682237.1-201ENST00000415016 335 ntBASIC3.32□□□□□ -1.88
Retrieved 100 of 98,524 protein–RNA pairs in 109.4 ms