Protein–RNA interactions for Protein: Q9P232

CNTN3, Contactin-3, humanhuman

Predictions only

Length 1,028 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CNTN3Q9P232 PCED1B-AS1-208ENST00000551898 359 ntTSL 3 BASIC4.76□□□□□ -1.65
CNTN3Q9P232 AC005476.1-201ENST00000554427 397 ntBASIC4.76□□□□□ -1.65
CNTN3Q9P232 MIR3138-201ENST00000585238 82 ntBASIC4.76□□□□□ -1.65
CNTN3Q9P232 RPL7P50-201ENST00000600588 727 ntBASIC4.76□□□□□ -1.65
CNTN3Q9P232 AC073410.2-201ENST00000603240 332 ntBASIC4.76□□□□□ -1.65
CNTN3Q9P232 AL590392.1-201ENST00000604960 446 ntBASIC4.76□□□□□ -1.65
CNTN3Q9P232 AC010201.1-201ENST00000605051 540 ntBASIC4.76□□□□□ -1.65
CNTN3Q9P232 AC005046.1-201ENST00000608515 625 ntBASIC4.76□□□□□ -1.65
CNTN3Q9P232 5S_rRNA.16-201ENST00000612928 119 ntBASIC4.76□□□□□ -1.65
CNTN3Q9P232 MIR6716-201ENST00000613413 80 ntBASIC4.76□□□□□ -1.65
CNTN3Q9P232 AC140479.6-201ENST00000633535 357 ntBASIC4.76□□□□□ -1.65
CNTN3Q9P232 AL359313.1-202ENST00000635073 544 ntTSL 4 BASIC4.76□□□□□ -1.65
CNTN3Q9P232 ZNF780B-202ENST00000434248 8665 ntAPPRIS P1 TSL 5 BASIC4.76□□□□□ -1.65
CNTN3Q9P232 ZNF780B-207ENST00000617676 8664 ntAPPRIS P1 TSL 5 BASIC4.76□□□□□ -1.65
CNTN3Q9P232 LUM-201ENST00000266718 3008 ntAPPRIS P1 TSL 1 (best) BASIC4.76□□□□□ -1.65
CNTN3Q9P232 LUZP2-207ENST00000533227 5016 ntTSL 1 (best) BASIC4.76□□□□□ -1.65
CNTN3Q9P232 IPO5-201ENST00000261574 6003 ntTSL 1 (best) BASIC4.76□□□□□ -1.65
CNTN3Q9P232 PRG4-202ENST00000367483 4921 ntTSL 5 BASIC4.76□□□□□ -1.65
CNTN3Q9P232 AK9-202ENST00000355283 2499 ntTSL 1 (best) BASIC4.75□□□□□ -1.65
CNTN3Q9P232 SLCO1A2-201ENST00000307378 7682 ntAPPRIS P1 TSL 1 (best) BASIC4.75□□□□□ -1.65
CNTN3Q9P232 AL359693.1-201ENST00000614959 2407 ntBASIC4.75□□□□□ -1.65
CNTN3Q9P232 NFIB-203ENST00000380934 2142 ntTSL 2 BASIC4.75□□□□□ -1.65
CNTN3Q9P232 NUTM2B-AS1-213ENST00000619625 7611 ntTSL 2 BASIC4.75□□□□□ -1.65
CNTN3Q9P232 RNA5SP307-201ENST00000362863 116 ntBASIC4.75□□□□□ -1.65
CNTN3Q9P232 RNY1-201ENST00000364228 113 ntBASIC4.75□□□□□ -1.65
CNTN3Q9P232 Y_RNA.237-201ENST00000364439 102 ntBASIC4.75□□□□□ -1.65
CNTN3Q9P232 SPRR2D-203ENST00000368757 800 ntAPPRIS P1 TSL 3 BASIC4.75□□□□□ -1.65
CNTN3Q9P232 Y_RNA.539-201ENST00000384635 107 ntBASIC4.75□□□□□ -1.65
CNTN3Q9P232 SNORA40C-201ENST00000391285 128 ntBASIC4.75□□□□□ -1.65
CNTN3Q9P232 AC009237.10-201ENST00000414112 510 ntBASIC4.75□□□□□ -1.65
CNTN3Q9P232 RPL23AP25-201ENST00000430973 463 ntBASIC4.75□□□□□ -1.65
CNTN3Q9P232 AL445465.2-201ENST00000455530 461 ntTSL 2 BASIC4.75□□□□□ -1.65
CNTN3Q9P232 AC010618.1-201ENST00000469924 477 ntBASIC4.75□□□□□ -1.65
CNTN3Q9P232 MED28P2-201ENST00000475771 317 ntBASIC4.75□□□□□ -1.65
CNTN3Q9P232 RN7SL812P-201ENST00000493791 279 ntBASIC4.75□□□□□ -1.65
CNTN3Q9P232 AC114741.1-201ENST00000504357 464 ntTSL 2 BASIC4.75□□□□□ -1.65
CNTN3Q9P232 RNU7-175P-201ENST00000515915 61 ntBASIC4.75□□□□□ -1.65
CNTN3Q9P232 RNU4-71P-201ENST00000516258 113 ntBASIC4.75□□□□□ -1.65
CNTN3Q9P232 RNU6-406P-201ENST00000516470 107 ntBASIC4.75□□□□□ -1.65
CNTN3Q9P232 RNU6-1073P-201ENST00000517182 106 ntBASIC4.75□□□□□ -1.65
CNTN3Q9P232 AC022868.1-201ENST00000517767 391 ntBASIC4.75□□□□□ -1.65
CNTN3Q9P232 AC093023.1-201ENST00000547375 507 ntBASIC4.75□□□□□ -1.65
CNTN3Q9P232 AC104002.1-201ENST00000557025 380 ntTSL 3 BASIC4.75□□□□□ -1.65
CNTN3Q9P232 AC087749.2-201ENST00000583910 352 ntTSL 5 BASIC4.75□□□□□ -1.65
CNTN3Q9P232 RLIMP1-201ENST00000339626 1680 ntBASIC4.75□□□□□ -1.65
CNTN3Q9P232 FGD4-213ENST00000546442 3503 ntTSL 5 BASIC4.75□□□□□ -1.65
CNTN3Q9P232 SAMSN1-201ENST00000285670 2185 ntTSL 1 (best) BASIC4.75□□□□□ -1.65
CNTN3Q9P232 LINC01505-206ENST00000637046 4266 ntTSL 5 BASIC4.75□□□□□ -1.65
CNTN3Q9P232 CEP295-201ENST00000325212 8057 ntAPPRIS P2 TSL 2 BASIC4.75□□□□□ -1.65
CNTN3Q9P232 CD200R1-204ENST00000471858 3679 ntAPPRIS ALT2 TSL 1 (best) BASIC4.75□□□□□ -1.65
CNTN3Q9P232 LINC02555-201ENST00000563933 1951 ntBASIC4.74□□□□□ -1.65
CNTN3Q9P232 PIGN-210ENST00000588571 1960 ntTSL 5 BASIC4.74□□□□□ -1.65
CNTN3Q9P232 U2SURP-214ENST00000493598 3491 ntTSL 5 BASIC4.74□□□□□ -1.65
CNTN3Q9P232 PLCE1-202ENST00000371380 12024 ntAPPRIS P3 TSL 1 (best) BASIC4.74□□□□□ -1.65
CNTN3Q9P232 OR5A1-202ENST00000641045 8612 ntAPPRIS P1 BASIC4.74□□□□□ -1.65
CNTN3Q9P232 PCDH15-209ENST00000395433 6942 ntTSL 5 BASIC4.74□□□□□ -1.65
CNTN3Q9P232 SNORA31-201ENST00000362607 130 ntBASIC4.74□□□□□ -1.65
CNTN3Q9P232 U3.6-201ENST00000363622 211 ntBASIC4.74□□□□□ -1.65
CNTN3Q9P232 Y_RNA.180-201ENST00000363867 113 ntBASIC4.74□□□□□ -1.65
CNTN3Q9P232 RNA5SP366-201ENST00000365454 123 ntBASIC4.74□□□□□ -1.65
CNTN3Q9P232 RNY3P4-201ENST00000384428 101 ntBASIC4.74□□□□□ -1.65
CNTN3Q9P232 RPL23AP52-201ENST00000439311 478 ntBASIC4.74□□□□□ -1.65
CNTN3Q9P232 AP000844.1-201ENST00000446631 577 ntTSL 3 BASIC4.74□□□□□ -1.65
CNTN3Q9P232 PRELID3BP1-201ENST00000457142 540 ntBASIC4.74□□□□□ -1.65
CNTN3Q9P232 RNU6-1256P-201ENST00000516539 103 ntBASIC4.74□□□□□ -1.65
CNTN3Q9P232 RNA5SP291-201ENST00000517222 105 ntBASIC4.74□□□□□ -1.65
CNTN3Q9P232 LINC01919-202ENST00000579506 384 ntTSL 3 BASIC4.74□□□□□ -1.65
CNTN3Q9P232 RN7SL176P-201ENST00000580352 264 ntBASIC4.74□□□□□ -1.65
CNTN3Q9P232 BX284668.6-201ENST00000606899 438 ntBASIC4.74□□□□□ -1.65
CNTN3Q9P232 AP002826.1-201ENST00000608835 315 ntBASIC4.74□□□□□ -1.65
CNTN3Q9P232 FTX_2.1-201ENST00000618816 94 ntBASIC4.74□□□□□ -1.65
CNTN3Q9P232 CCL14-203ENST00000620991 426 ntTSL 1 (best) BASIC4.74□□□□□ -1.65
CNTN3Q9P232 PATJ-202ENST00000316485 3657 ntTSL 5 BASIC4.74□□□□□ -1.65
CNTN3Q9P232 BIRC3-206ENST00000532808 4238 ntAPPRIS P1 TSL 5 BASIC4.74□□□□□ -1.65
CNTN3Q9P232 GABRG2-210ENST00000638772 7669 ntTSL 5 BASIC4.74□□□□□ -1.65
CNTN3Q9P232 SLC17A4-201ENST00000377905 3616 ntAPPRIS P1 TSL 1 (best) BASIC4.74□□□□□ -1.65
CNTN3Q9P232 XIRP2-207ENST00000628543 12182 ntTSL 5 BASIC4.74□□□□□ -1.65
CNTN3Q9P232 PLD1-203ENST00000356327 5855 ntAPPRIS P1 TSL 1 (best) BASIC4.74□□□□□ -1.65
CNTN3Q9P232 GHR-202ENST00000357703 4316 ntTSL 5 BASIC4.74□□□□□ -1.65
CNTN3Q9P232 FAM204A-203ENST00000369183 13889 ntAPPRIS P1 TSL 1 (best) BASIC4.74□□□□□ -1.65
CNTN3Q9P232 ZRANB3-201ENST00000264159 4046 ntAPPRIS P3 TSL 1 (best) BASIC4.74□□□□□ -1.65
CNTN3Q9P232 SNX16-212ENST00000615066 1918 ntTSL 5 BASIC4.74□□□□□ -1.65
CNTN3Q9P232 LINC02432-202ENST00000509161 2839 ntTSL 2 BASIC4.73□□□□□ -1.65
CNTN3Q9P232 FANCD2-202ENST00000383807 5102 ntAPPRIS ALT2 TSL 1 (best) BASIC4.73□□□□□ -1.65
CNTN3Q9P232 PREPL-205ENST00000409411 4725 ntTSL 1 (best) BASIC4.73□□□□□ -1.65
CNTN3Q9P232 PARP8-201ENST00000281631 7177 ntAPPRIS P1 TSL 1 (best) BASIC4.73□□□□□ -1.65
CNTN3Q9P232 ENOX2-202ENST00000370927 3788 ntTSL 1 (best) BASIC4.73□□□□□ -1.65
CNTN3Q9P232 AC024940.1-206ENST00000632817 4299 ntAPPRIS P5 TSL 5 BASIC4.73□□□□□ -1.65
CNTN3Q9P232 RNU1-132P-201ENST00000364300 164 ntBASIC4.73□□□□□ -1.65
CNTN3Q9P232 RPL21P75-201ENST00000396599 483 ntBASIC4.73□□□□□ -1.65
CNTN3Q9P232 RPL21P28-201ENST00000401418 483 ntBASIC4.73□□□□□ -1.65
CNTN3Q9P232 RPS29P13-201ENST00000402041 169 ntBASIC4.73□□□□□ -1.65
CNTN3Q9P232 MRPL35P1-201ENST00000404272 572 ntBASIC4.73□□□□□ -1.65
CNTN3Q9P232 RPS20P14-201ENST00000412545 360 ntBASIC4.73□□□□□ -1.65
CNTN3Q9P232 CYP4F29P-201ENST00000420685 446 ntBASIC4.73□□□□□ -1.65
CNTN3Q9P232 AL590556.1-201ENST00000423231 483 ntBASIC4.73□□□□□ -1.65
CNTN3Q9P232 AC091286.1-201ENST00000431233 461 ntBASIC4.73□□□□□ -1.65
CNTN3Q9P232 AC005828.1-201ENST00000431604 524 ntTSL 5 BASIC4.73□□□□□ -1.65
CNTN3Q9P232 AL591043.1-201ENST00000432461 424 ntBASIC4.73□□□□□ -1.65
CNTN3Q9P232 NHS-AS1-201ENST00000452788 366 ntTSL 3 BASIC4.73□□□□□ -1.65
Retrieved 100 of 98,524 protein–RNA pairs in 165 ms