Protein–RNA interactions for Protein: Q9P1Z9

CCDC180, Coiled-coil domain-containing protein 180, humanhuman

Predictions only

Length 1,646 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC180Q9P1Z9 UBE2Q2P5Y-201ENST00000413867 207 ntBASIC0.69□□□□□ -2.3
CCDC180Q9P1Z9 AL161935.1-201ENST00000420945 421 ntTSL 3 BASIC0.69□□□□□ -2.3
CCDC180Q9P1Z9 UBE2Q2P4Y-201ENST00000433767 207 ntBASIC0.69□□□□□ -2.3
CCDC180Q9P1Z9 PRELID3BP1-201ENST00000457142 540 ntBASIC0.69□□□□□ -2.3
CCDC180Q9P1Z9 PNPLA4P1-201ENST00000458328 305 ntBASIC0.69□□□□□ -2.3
CCDC180Q9P1Z9 SNORD124-201ENST00000459577 104 ntBASIC0.69□□□□□ -2.3
CCDC180Q9P1Z9 AC022254.1-201ENST00000567857 235 ntBASIC0.69□□□□□ -2.3
CCDC180Q9P1Z9 AC010329.5-201ENST00000623497 2174 ntBASIC0.69□□□□□ -2.3
CCDC180Q9P1Z9 TXNDC8-203ENST00000374511 472 ntAPPRIS ALT2 TSL 5 BASIC0.68□□□□□ -2.3
CCDC180Q9P1Z9 SNORA8-201ENST00000384574 139 ntBASIC0.68□□□□□ -2.3
CCDC180Q9P1Z9 RNU6-272P-201ENST00000411028 104 ntBASIC0.68□□□□□ -2.3
CCDC180Q9P1Z9 MTCO3P12-201ENST00000416718 547 ntBASIC0.68□□□□□ -2.3
CCDC180Q9P1Z9 AC097463.2-201ENST00000421074 142 ntBASIC0.68□□□□□ -2.3
CCDC180Q9P1Z9 AC018693.1-201ENST00000442829 550 ntTSL 4 BASIC0.68□□□□□ -2.3
CCDC180Q9P1Z9 FO393415.3-201ENST00000456424 375 ntTSL 3 BASIC0.68□□□□□ -2.3
CCDC180Q9P1Z9 HMGN1P10-201ENST00000474557 553 ntBASIC0.68□□□□□ -2.3
CCDC180Q9P1Z9 AC112178.1-201ENST00000511165 676 ntTSL 3 BASIC0.68□□□□□ -2.3
CCDC180Q9P1Z9 CTAGE1-202ENST00000525417 1267 ntAPPRIS ALT2 BASIC0.68□□□□□ -2.3
CCDC180Q9P1Z9 AC009754.1-201ENST00000566282 540 ntTSL 4 BASIC0.68□□□□□ -2.3
CCDC180Q9P1Z9 AL109837.2-201ENST00000632608 295 ntTSL 3 BASIC0.68□□□□□ -2.3
CCDC180Q9P1Z9 RNU5D-1-201ENST00000363299 116 ntBASIC0.67□□□□□ -2.3
CCDC180Q9P1Z9 RNU6-185P-201ENST00000384421 107 ntBASIC0.67□□□□□ -2.3
CCDC180Q9P1Z9 MIR10B-201ENST00000385011 110 ntBASIC0.67□□□□□ -2.3
CCDC180Q9P1Z9 AC244023.1-201ENST00000426884 112 ntBASIC0.67□□□□□ -2.3
CCDC180Q9P1Z9 AC003084.1-201ENST00000427030 435 ntTSL 5 BASIC0.67□□□□□ -2.3
CCDC180Q9P1Z9 LARP7P4-201ENST00000481075 878 ntBASIC0.67□□□□□ -2.3
CCDC180Q9P1Z9 AC091435.1-201ENST00000505442 584 ntBASIC0.67□□□□□ -2.3
CCDC180Q9P1Z9 AC090888.1-201ENST00000561335 1141 ntBASIC0.67□□□□□ -2.3
CCDC180Q9P1Z9 AL355877.2-201ENST00000603670 358 ntBASIC0.67□□□□□ -2.3
CCDC180Q9P1Z9 AC242498.1-201ENST00000604134 111 ntBASIC0.67□□□□□ -2.3
CCDC180Q9P1Z9 AC068276.1-201ENST00000605793 379 ntBASIC0.67□□□□□ -2.3
CCDC180Q9P1Z9 FRG1HP-204ENST00000617940 757 ntBASIC0.67□□□□□ -2.3
CCDC180Q9P1Z9 AC243994.1-201ENST00000618627 109 ntBASIC0.67□□□□□ -2.3
CCDC180Q9P1Z9 AC027309.3-201ENST00000623419 351 ntBASIC0.67□□□□□ -2.3
CCDC180Q9P1Z9 HMGN2P39-201ENST00000398005 273 ntBASIC0.67□□□□□ -2.3
CCDC180Q9P1Z9 PIGFP2-201ENST00000421400 651 ntBASIC0.67□□□□□ -2.3
CCDC180Q9P1Z9 AL714022.1-201ENST00000439897 151 ntBASIC0.67□□□□□ -2.3
CCDC180Q9P1Z9 AC116337.2-201ENST00000477662 156 ntBASIC0.67□□□□□ -2.3
CCDC180Q9P1Z9 RNU4-57P-201ENST00000515980 135 ntBASIC0.67□□□□□ -2.3
CCDC180Q9P1Z9 LINC01495-201ENST00000532380 421 ntTSL 2 BASIC0.67□□□□□ -2.3
CCDC180Q9P1Z9 AL158801.3-201ENST00000555514 363 ntTSL 3 BASIC0.67□□□□□ -2.3
CCDC180Q9P1Z9 AC136932.1-201ENST00000574771 208 ntBASIC0.67□□□□□ -2.3
CCDC180Q9P1Z9 AC008751.2-201ENST00000597885 980 ntBASIC0.67□□□□□ -2.3
CCDC180Q9P1Z9 AL360181.4-201ENST00000621752 134 ntBASIC0.67□□□□□ -2.3
CCDC180Q9P1Z9 DIRC1-201ENST00000308100 1037 ntAPPRIS P1 TSL 1 (best) BASIC0.66□□□□□ -2.3
CCDC180Q9P1Z9 S100A12-201ENST00000368737 518 ntAPPRIS P1 TSL 1 (best) BASIC0.66□□□□□ -2.3
CCDC180Q9P1Z9 RNU6-338P-201ENST00000383888 105 ntBASIC0.66□□□□□ -2.3
CCDC180Q9P1Z9 MIR493-201ENST00000385254 89 ntBASIC0.66□□□□□ -2.3
CCDC180Q9P1Z9 MRPL35P1-201ENST00000404272 572 ntBASIC0.66□□□□□ -2.3
CCDC180Q9P1Z9 AL117342.1-201ENST00000404861 406 ntBASIC0.66□□□□□ -2.3
CCDC180Q9P1Z9 AC013410.2-201ENST00000422627 201 ntBASIC0.66□□□□□ -2.3
CCDC180Q9P1Z9 LNCSRLR-201ENST00000490375 709 ntTSL 3 BASIC0.66□□□□□ -2.3
CCDC180Q9P1Z9 AC093677.1-201ENST00000514414 678 ntBASIC0.66□□□□□ -2.3
CCDC180Q9P1Z9 LINC02384-208ENST00000546086 565 ntTSL 3 BASIC0.66□□□□□ -2.3
CCDC180Q9P1Z9 AC091563.1-202ENST00000574086 522 ntTSL 5 BASIC0.66□□□□□ -2.3
CCDC180Q9P1Z9 MIR6086-201ENST00000638065 55 ntBASIC0.66□□□□□ -2.3
CCDC180Q9P1Z9 MIR100-201ENST00000385259 80 ntBASIC0.65□□□□□ -2.31
CCDC180Q9P1Z9 PDC-202ENST00000497198 1174 ntTSL 1 (best) BASIC0.65□□□□□ -2.31
CCDC180Q9P1Z9 SNORA48.10-201ENST00000516965 160 ntBASIC0.65□□□□□ -2.31
CCDC180Q9P1Z9 SCARNA11.3-201ENST00000517276 130 ntBASIC0.65□□□□□ -2.31
CCDC180Q9P1Z9 AL078605.1-201ENST00000603529 500 ntBASIC0.65□□□□□ -2.31
CCDC180Q9P1Z9 AC018638.7-201ENST00000605836 1114 ntBASIC0.65□□□□□ -2.31
CCDC180Q9P1Z9 AC084824.5-201ENST00000612009 413 ntBASIC0.65□□□□□ -2.31
CCDC180Q9P1Z9 Y_RNA.67-201ENST00000362870 100 ntBASIC0.64□□□□□ -2.31
CCDC180Q9P1Z9 RNA5SP125-201ENST00000364843 120 ntBASIC0.64□□□□□ -2.31
CCDC180Q9P1Z9 RNU1-36P-201ENST00000365130 165 ntBASIC0.64□□□□□ -2.31
CCDC180Q9P1Z9 MIR30A-201ENST00000385092 71 ntBASIC0.64□□□□□ -2.31
CCDC180Q9P1Z9 MTCO1P56-201ENST00000401674 224 ntBASIC0.64□□□□□ -2.31
CCDC180Q9P1Z9 AC006548.1-201ENST00000427470 102 ntBASIC0.64□□□□□ -2.31
CCDC180Q9P1Z9 TH2LCRR-202ENST00000435042 472 ntTSL 5 BASIC0.64□□□□□ -2.31
CCDC180Q9P1Z9 TRAPPC2P8-201ENST00000440676 396 ntBASIC0.64□□□□□ -2.31
CCDC180Q9P1Z9 TRAPPC2P3-201ENST00000443200 321 ntBASIC0.64□□□□□ -2.31
CCDC180Q9P1Z9 AL096803.2-201ENST00000450032 677 ntBASIC0.64□□□□□ -2.31
CCDC180Q9P1Z9 AC073486.1-201ENST00000453278 531 ntTSL 5 BASIC0.64□□□□□ -2.31
CCDC180Q9P1Z9 RNA5SP404-201ENST00000517118 132 ntBASIC0.64□□□□□ -2.31
CCDC180Q9P1Z9 MIR4422-201ENST00000581938 83 ntBASIC0.64□□□□□ -2.31
CCDC180Q9P1Z9 AP003400.5-201ENST00000624827 617 ntBASIC0.64□□□□□ -2.31
CCDC180Q9P1Z9 CR381572.1-201ENST00000625098 102 ntBASIC0.64□□□□□ -2.31
CCDC180Q9P1Z9 MICF-203ENST00000432679 129 ntBASIC0.64□□□□□ -2.31
CCDC180Q9P1Z9 AC114912.1-201ENST00000503394 546 ntTSL 3 BASIC0.64□□□□□ -2.31
CCDC180Q9P1Z9 AC095056.1-201ENST00000503918 425 ntTSL 3 BASIC0.64□□□□□ -2.31
CCDC180Q9P1Z9 SCARNA3-201ENST00000517097 143 ntBASIC0.64□□□□□ -2.31
CCDC180Q9P1Z9 NAP1L1P1-201ENST00000524793 1063 ntBASIC0.64□□□□□ -2.31
CCDC180Q9P1Z9 AC007368.1-201ENST00000536422 974 ntTSL 5 BASIC0.64□□□□□ -2.31
CCDC180Q9P1Z9 EIF4A1P12-201ENST00000551910 141 ntBASIC0.64□□□□□ -2.31
CCDC180Q9P1Z9 AL133241.1-201ENST00000556832 487 ntBASIC0.64□□□□□ -2.31
CCDC180Q9P1Z9 RNASEH2B-AS1-202ENST00000593369 648 ntTSL 5 BASIC0.64□□□□□ -2.31
CCDC180Q9P1Z9 MIR6130-201ENST00000619419 109 ntBASIC0.64□□□□□ -2.31
CCDC180Q9P1Z9 U3.8-201ENST00000363675 217 ntBASIC0.63□□□□□ -2.31
CCDC180Q9P1Z9 RNU6-35P-201ENST00000384530 107 ntBASIC0.63□□□□□ -2.31
CCDC180Q9P1Z9 AC006461.1-201ENST00000412637 326 ntBASIC0.63□□□□□ -2.31
CCDC180Q9P1Z9 MTND6P13-201ENST00000443510 523 ntBASIC0.63□□□□□ -2.31
CCDC180Q9P1Z9 AL355472.4-201ENST00000610233 626 ntBASIC0.63□□□□□ -2.31
CCDC180Q9P1Z9 uc_338.17-201ENST00000619633 179 ntBASIC0.63□□□□□ -2.31
CCDC180Q9P1Z9 AL513185.3-201ENST00000433335 1300 ntBASIC0.63□□□□□ -2.31
CCDC180Q9P1Z9 AC073326.1-201ENST00000451832 557 ntTSL 3 BASIC0.62□□□□□ -2.31
CCDC180Q9P1Z9 AC016687.2-203ENST00000506650 578 ntTSL 3 BASIC0.62□□□□□ -2.31
CCDC180Q9P1Z9 SNORA48.9-201ENST00000516419 162 ntBASIC0.62□□□□□ -2.31
CCDC180Q9P1Z9 AL035078.1-202ENST00000531627 413 ntTSL 2 BASIC0.62□□□□□ -2.31
CCDC180Q9P1Z9 AC100781.1-203ENST00000598549 399 ntTSL 5 BASIC0.62□□□□□ -2.31
Retrieved 100 of 98,524 protein–RNA pairs in 80.6 ms