Protein–RNA interactions for Protein: Q9NRW7

VPS45, Vacuolar protein sorting-associated protein 45, humanhuman

Predictions only

Length 570 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VPS45Q9NRW7 RNU6-685P-201ENST00000517088 95 ntBASIC3.6□□□□□ -1.83
VPS45Q9NRW7 AC021242.2-203ENST00000521842 687 ntTSL 3 BASIC3.6□□□□□ -1.83
VPS45Q9NRW7 AC015818.4-201ENST00000580931 353 ntTSL 5 BASIC3.6□□□□□ -1.83
VPS45Q9NRW7 FGF7P1-201ENST00000582820 288 ntBASIC3.6□□□□□ -1.83
VPS45Q9NRW7 AC008521.1-201ENST00000587471 187 ntBASIC3.6□□□□□ -1.83
VPS45Q9NRW7 AC010928.1-202ENST00000589354 473 ntTSL 3 BASIC3.6□□□□□ -1.83
VPS45Q9NRW7 AL137843.1-201ENST00000605078 385 ntBASIC3.6□□□□□ -1.83
VPS45Q9NRW7 AC007619.2-201ENST00000605743 379 ntBASIC3.6□□□□□ -1.83
VPS45Q9NRW7 AC104971.4-201ENST00000622763 249 ntTSL 5 BASIC3.6□□□□□ -1.83
VPS45Q9NRW7 LINC01416-201ENST00000563553 2310 ntTSL 1 (best) BASIC3.6□□□□□ -1.83
VPS45Q9NRW7 KNTC1-204ENST00000436959 2412 ntTSL 2 BASIC3.6□□□□□ -1.83
VPS45Q9NRW7 CYSLTR2-201ENST00000282018 4672 ntAPPRIS P1 BASIC3.59□□□□□ -1.83
VPS45Q9NRW7 TBC1D31-214ENST00000522420 3167 ntTSL 1 (best) BASIC3.59□□□□□ -1.83
VPS45Q9NRW7 ZGRF1-212ENST00000612287 2176 ntTSL 1 (best) BASIC3.59□□□□□ -1.83
VPS45Q9NRW7 GPBP1-201ENST00000264779 1786 ntAPPRIS ALT2 TSL 1 (best) BASIC3.59□□□□□ -1.83
VPS45Q9NRW7 SULT1B1-201ENST00000310613 7115 ntAPPRIS P1 TSL 1 (best) BASIC3.59□□□□□ -1.83
VPS45Q9NRW7 OR10A7-201ENST00000326258 951 ntAPPRIS P1 BASIC3.59□□□□□ -1.83
VPS45Q9NRW7 RNU4-66P-201ENST00000365199 138 ntBASIC3.59□□□□□ -1.83
VPS45Q9NRW7 RFX3-203ENST00000381984 364 ntTSL 3 BASIC3.59□□□□□ -1.83
VPS45Q9NRW7 OPRPN-201ENST00000399575 1040 ntAPPRIS P1 TSL 1 (best) BASIC3.59□□□□□ -1.83
VPS45Q9NRW7 UBA52P6-201ENST00000399822 382 ntBASIC3.59□□□□□ -1.83
VPS45Q9NRW7 AL162578.1-201ENST00000406202 378 ntBASIC3.59□□□□□ -1.83
VPS45Q9NRW7 RNU6ATAC16P-201ENST00000408591 138 ntBASIC3.59□□□□□ -1.83
VPS45Q9NRW7 AL136322.1-201ENST00000422250 548 ntTSL 4 BASIC3.59□□□□□ -1.83
VPS45Q9NRW7 RPL23AP82-202ENST00000427528 469 ntBASIC3.59□□□□□ -1.83
VPS45Q9NRW7 HIGD1AP11-201ENST00000438361 280 ntBASIC3.59□□□□□ -1.83
VPS45Q9NRW7 MTND1P11-201ENST00000456661 876 ntBASIC3.59□□□□□ -1.83
VPS45Q9NRW7 RPL21P8-201ENST00000465083 535 ntBASIC3.59□□□□□ -1.83
VPS45Q9NRW7 RPL21P99-201ENST00000480369 423 ntBASIC3.59□□□□□ -1.83
VPS45Q9NRW7 LINC00971-201ENST00000482721 535 ntTSL 2 BASIC3.59□□□□□ -1.83
VPS45Q9NRW7 AC026801.1-201ENST00000497178 464 ntBASIC3.59□□□□□ -1.83
VPS45Q9NRW7 AC117522.3-201ENST00000507974 584 ntBASIC3.59□□□□□ -1.83
VPS45Q9NRW7 MTND4P7-201ENST00000523876 130 ntBASIC3.59□□□□□ -1.83
VPS45Q9NRW7 AC021698.1-201ENST00000524858 716 ntTSL 3 BASIC3.59□□□□□ -1.83
VPS45Q9NRW7 AL133383.1-201ENST00000569292 901 ntTSL 1 (best) BASIC3.59□□□□□ -1.83
VPS45Q9NRW7 MIR3124-201ENST00000582636 67 ntBASIC3.59□□□□□ -1.83
VPS45Q9NRW7 MIR4325-201ENST00000583049 90 ntBASIC3.59□□□□□ -1.83
VPS45Q9NRW7 MIR4424-201ENST00000585257 86 ntBASIC3.59□□□□□ -1.83
VPS45Q9NRW7 DPPA3P3-201ENST00000603842 430 ntBASIC3.59□□□□□ -1.83
VPS45Q9NRW7 RNU6-89P-201ENST00000606519 100 ntBASIC3.59□□□□□ -1.83
VPS45Q9NRW7 AC012409.4-201ENST00000612923 249 ntBASIC3.59□□□□□ -1.83
VPS45Q9NRW7 CDKN3-212ENST00000620759 196 ntTSL 5 BASIC3.59□□□□□ -1.83
VPS45Q9NRW7 UBE2E2-207ENST00000628311 267 ntTSL 5 BASIC3.59□□□□□ -1.83
VPS45Q9NRW7 AC245427.9-201ENST00000633713 53 ntAPPRIS P1 BASIC3.59□□□□□ -1.83
VPS45Q9NRW7 ADGRG2-206ENST00000360279 4702 ntTSL 1 (best) BASIC3.59□□□□□ -1.83
VPS45Q9NRW7 FOXP2-206ENST00000393491 6085 ntTSL 5 BASIC3.59□□□□□ -1.83
VPS45Q9NRW7 OR4M1-202ENST00000641200 3493 ntAPPRIS P1 BASIC3.59□□□□□ -1.83
VPS45Q9NRW7 MACF1-201ENST00000289893 19141 ntTSL 5 BASIC3.59□□□□□ -1.84
VPS45Q9NRW7 NEB-201ENST00000172853 20634 ntAPPRIS ALT2 TSL 1 (best) BASIC3.59□□□□□ -1.84
VPS45Q9NRW7 AL021368.2-201ENST00000606125 5352 ntBASIC3.59□□□□□ -1.84
VPS45Q9NRW7 SYNE1-212ENST00000423061 27436 ntAPPRIS ALT2 TSL 1 (best) BASIC3.58□□□□□ -1.84
VPS45Q9NRW7 SPAG11A-202ENST00000326625 445 ntTSL 5 BASIC3.58□□□□□ -1.84
VPS45Q9NRW7 RNU6-1167P-201ENST00000363227 94 ntBASIC3.58□□□□□ -1.84
VPS45Q9NRW7 RNU4-20P-201ENST00000365601 151 ntBASIC3.58□□□□□ -1.84
VPS45Q9NRW7 RNU6-38P-201ENST00000384085 107 ntBASIC3.58□□□□□ -1.84
VPS45Q9NRW7 RNU6-190P-201ENST00000384154 102 ntBASIC3.58□□□□□ -1.84
VPS45Q9NRW7 RNU6-14P-201ENST00000384630 106 ntBASIC3.58□□□□□ -1.84
VPS45Q9NRW7 RNU6-550P-201ENST00000391057 101 ntBASIC3.58□□□□□ -1.84
VPS45Q9NRW7 AC239803.1-203ENST00000411978 452 ntTSL 2 BASIC3.58□□□□□ -1.84
VPS45Q9NRW7 AC017079.2-201ENST00000416102 485 ntBASIC3.58□□□□□ -1.84
VPS45Q9NRW7 ARL5AP1-201ENST00000418991 388 ntBASIC3.58□□□□□ -1.84
VPS45Q9NRW7 MRPS31P2-201ENST00000451581 518 ntBASIC3.58□□□□□ -1.84
VPS45Q9NRW7 U3.44-201ENST00000458938 192 ntBASIC3.58□□□□□ -1.84
VPS45Q9NRW7 RNU6-333P-201ENST00000459117 107 ntBASIC3.58□□□□□ -1.84
VPS45Q9NRW7 HMGN2P26-201ENST00000463169 339 ntBASIC3.58□□□□□ -1.84
VPS45Q9NRW7 RN7SL330P-201ENST00000469709 307 ntBASIC3.58□□□□□ -1.84
VPS45Q9NRW7 PPP2R2B-IT1-201ENST00000505921 447 ntTSL 3 BASIC3.58□□□□□ -1.84
VPS45Q9NRW7 RBBP4P6-201ENST00000508098 202 ntBASIC3.58□□□□□ -1.84
VPS45Q9NRW7 SLC7A11-AS1-201ENST00000510066 817 ntTSL 2 BASIC3.58□□□□□ -1.84
VPS45Q9NRW7 SNORA70.18-201ENST00000516696 98 ntBASIC3.58□□□□□ -1.84
VPS45Q9NRW7 AC025524.1-201ENST00000518489 606 ntTSL 4 BASIC3.58□□□□□ -1.84
VPS45Q9NRW7 PSMA2P1-201ENST00000526365 646 ntBASIC3.58□□□□□ -1.84
VPS45Q9NRW7 HTN3-202ENST00000526767 578 ntAPPRIS P2 TSL 1 (best) BASIC3.58□□□□□ -1.84
VPS45Q9NRW7 AP003498.1-201ENST00000532530 347 ntTSL 3 BASIC3.58□□□□□ -1.84
VPS45Q9NRW7 AC023050.3-201ENST00000541142 333 ntBASIC3.58□□□□□ -1.84
VPS45Q9NRW7 AC026333.2-201ENST00000542164 106 ntBASIC3.58□□□□□ -1.84
VPS45Q9NRW7 AC010185.1-201ENST00000542489 456 ntTSL 3 BASIC3.58□□□□□ -1.84
VPS45Q9NRW7 AC007619.1-201ENST00000544086 412 ntTSL 5 BASIC3.58□□□□□ -1.84
VPS45Q9NRW7 AC006518.2-202ENST00000544947 297 ntTSL 2 BASIC3.58□□□□□ -1.84
VPS45Q9NRW7 AC078814.3-201ENST00000553036 491 ntBASIC3.58□□□□□ -1.84
VPS45Q9NRW7 AC136601.2-201ENST00000604356 474 ntBASIC3.58□□□□□ -1.84
VPS45Q9NRW7 AL359547.2-201ENST00000615810 418 ntBASIC3.58□□□□□ -1.84
VPS45Q9NRW7 AC022149.2-201ENST00000621061 203 ntBASIC3.58□□□□□ -1.84
VPS45Q9NRW7 AC007405.1-203ENST00000623667 932 ntTSL 5 BASIC3.58□□□□□ -1.84
VPS45Q9NRW7 KIAA0586-215ENST00000619722 5597 ntAPPRIS ALT2 TSL 2 BASIC3.58□□□□□ -1.84
VPS45Q9NRW7 LRRC6-212ENST00000618342 1754 ntAPPRIS ALT1 TSL 5 BASIC3.58□□□□□ -1.84
VPS45Q9NRW7 ERBIN-201ENST00000284037 8647 ntTSL 1 (best) BASIC3.57□□□□□ -1.84
VPS45Q9NRW7 KIAA1841-202ENST00000356719 2149 ntTSL 5 BASIC3.57□□□□□ -1.84
VPS45Q9NRW7 Y_RNA.510-201ENST00000384511 114 ntBASIC3.57□□□□□ -1.84
VPS45Q9NRW7 MDM2-210ENST00000393413 657 ntTSL 1 (best) BASIC3.57□□□□□ -1.84
VPS45Q9NRW7 UBE2V1P2-201ENST00000397758 440 ntBASIC3.57□□□□□ -1.84
VPS45Q9NRW7 RNU4-26P-201ENST00000410270 107 ntBASIC3.57□□□□□ -1.84
VPS45Q9NRW7 EEF1A1P40-201ENST00000412883 573 ntBASIC3.57□□□□□ -1.84
VPS45Q9NRW7 AL109924.3-201ENST00000413324 393 ntTSL 2 BASIC3.57□□□□□ -1.84
VPS45Q9NRW7 AGTR1-204ENST00000418473 2071 ntTSL 5 BASIC3.57□□□□□ -1.84
VPS45Q9NRW7 DBIP2-201ENST00000419076 262 ntBASIC3.57□□□□□ -1.84
VPS45Q9NRW7 AC106873.1-201ENST00000420664 459 ntTSL 3 BASIC3.57□□□□□ -1.84
VPS45Q9NRW7 AC017074.1-201ENST00000424612 561 ntTSL 3 BASIC3.57□□□□□ -1.84
VPS45Q9NRW7 ARF4P2-201ENST00000430209 526 ntBASIC3.57□□□□□ -1.84
VPS45Q9NRW7 MTND4LP16-201ENST00000440828 295 ntBASIC3.57□□□□□ -1.84
Retrieved 100 of 98,524 protein–RNA pairs in 101.3 ms