Protein–RNA interactions for Protein: Q9NQC3

RTN4, Reticulon-4, humanhuman

Known RBP Predictions only

Length 1,192 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RTN4Q9NQC3 RNU1-88P-201ENST00000459274 128 ntBASIC6.36□□□□□ -1.39
RTN4Q9NQC3 AL591473.1-201ENST00000464297 313 ntBASIC6.36□□□□□ -1.39
RTN4Q9NQC3 AC022133.1-201ENST00000490961 571 ntBASIC6.36□□□□□ -1.39
RTN4Q9NQC3 AC137627.1-201ENST00000545761 289 ntBASIC6.36□□□□□ -1.39
RTN4Q9NQC3 LINC02386-202ENST00000551287 564 ntTSL 4 BASIC6.36□□□□□ -1.39
RTN4Q9NQC3 AC089998.2-201ENST00000551856 277 ntTSL 3 BASIC6.36□□□□□ -1.39
RTN4Q9NQC3 AC141273.1-201ENST00000565300 479 ntTSL 5 BASIC6.36□□□□□ -1.39
RTN4Q9NQC3 MIR4502-201ENST00000580432 81 ntBASIC6.36□□□□□ -1.39
RTN4Q9NQC3 RPL17P51-201ENST00000605218 238 ntBASIC6.36□□□□□ -1.39
RTN4Q9NQC3 PCGEM1.1-201ENST00000613431 131 ntBASIC6.36□□□□□ -1.39
RTN4Q9NQC3 RDM1-226ENST00000619828 687 ntTSL 1 (best) BASIC6.36□□□□□ -1.39
RTN4Q9NQC3 ZNF445-201ENST00000396077 18299 ntAPPRIS P1 TSL 1 (best) BASIC6.36□□□□□ -1.39
RTN4Q9NQC3 FOXP2-220ENST00000634411 4065 ntTSL 5 BASIC6.36□□□□□ -1.39
RTN4Q9NQC3 HSPA8P1-201ENST00000425843 1833 ntBASIC6.36□□□□□ -1.39
RTN4Q9NQC3 STRBP-204ENST00000447404 6161 ntAPPRIS P1 TSL 2 BASIC6.36□□□□□ -1.39
RTN4Q9NQC3 ATRX-201ENST00000373344 11220 ntAPPRIS P4 TSL 1 (best) BASIC6.36□□□□□ -1.39
RTN4Q9NQC3 KRR1-201ENST00000229214 10118 ntAPPRIS P1 TSL 1 (best) BASIC6.36□□□□□ -1.39
RTN4Q9NQC3 STON1-GTF2A1L-201ENST00000394751 3534 ntTSL 2 BASIC6.36□□□□□ -1.39
RTN4Q9NQC3 AL359854.1-201ENST00000614203 1594 ntBASIC6.35□□□□□ -1.39
RTN4Q9NQC3 PEAK1-204ENST00000560626 19217 ntAPPRIS P1 TSL 5 BASIC6.35□□□□□ -1.39
RTN4Q9NQC3 SNORA72.2-201ENST00000365028 127 ntBASIC6.35□□□□□ -1.39
RTN4Q9NQC3 RN7SKP269-201ENST00000365545 319 ntBASIC6.35□□□□□ -1.39
RTN4Q9NQC3 U3.36-201ENST00000408418 213 ntBASIC6.35□□□□□ -1.39
RTN4Q9NQC3 AL353662.1-201ENST00000439099 327 ntBASIC6.35□□□□□ -1.39
RTN4Q9NQC3 AC023141.8-201ENST00000442554 208 ntBASIC6.35□□□□□ -1.39
RTN4Q9NQC3 HSPE1P25-201ENST00000455484 251 ntBASIC6.35□□□□□ -1.39
RTN4Q9NQC3 RN7SL168P-201ENST00000463821 279 ntBASIC6.35□□□□□ -1.39
RTN4Q9NQC3 AL592156.1-201ENST00000508758 304 ntBASIC6.35□□□□□ -1.39
RTN4Q9NQC3 AC139720.2-201ENST00000514766 440 ntTSL 2 BASIC6.35□□□□□ -1.39
RTN4Q9NQC3 AC096577.1-202ENST00000515649 448 ntTSL 3 BASIC6.35□□□□□ -1.39
RTN4Q9NQC3 RN7SKP92-201ENST00000517266 244 ntBASIC6.35□□□□□ -1.39
RTN4Q9NQC3 RPS4XP16-203ENST00000596904 698 ntTSL 5 BASIC6.35□□□□□ -1.39
RTN4Q9NQC3 AC009779.6-201ENST00000603972 165 ntBASIC6.35□□□□□ -1.39
RTN4Q9NQC3 MIR6813-201ENST00000621638 56 ntBASIC6.35□□□□□ -1.39
RTN4Q9NQC3 CR392039.5-201ENST00000623201 510 ntBASIC6.35□□□□□ -1.39
RTN4Q9NQC3 NEK3-211ENST00000629912 141 ntTSL 5 BASIC6.35□□□□□ -1.39
RTN4Q9NQC3 KCNT2-203ENST00000451324 3146 ntTSL 1 (best) BASIC6.35□□□□□ -1.39
RTN4Q9NQC3 TPTE2-204ENST00000400103 1652 ntTSL 5 BASIC6.35□□□□□ -1.39
RTN4Q9NQC3 FTX-210ENST00000603037 8347 ntTSL 5 BASIC6.35□□□□□ -1.39
RTN4Q9NQC3 AC100800.1-201ENST00000524252 2054 ntTSL 1 (best) BASIC6.35□□□□□ -1.39
RTN4Q9NQC3 PREPL-205ENST00000409411 4725 ntTSL 1 (best) BASIC6.35□□□□□ -1.39
RTN4Q9NQC3 LRMP-221ENST00000636465 4540 ntAPPRIS ALT2 TSL 5 BASIC6.35□□□□□ -1.39
RTN4Q9NQC3 WHAMMP2-201ENST00000512149 5482 ntTSL 5 BASIC6.34□□□□□ -1.39
RTN4Q9NQC3 ATP7A-202ENST00000343533 8289 ntTSL 5 BASIC6.34□□□□□ -1.39
RTN4Q9NQC3 PLS3-209ENST00000539310 3037 ntAPPRIS P1 TSL 1 (best) BASIC6.34□□□□□ -1.39
RTN4Q9NQC3 IPO11-203ENST00000409534 1725 ntTSL 2 BASIC6.34□□□□□ -1.39
RTN4Q9NQC3 WDR17-201ENST00000280190 4705 ntAPPRIS P3 TSL 1 (best) BASIC6.34□□□□□ -1.39
RTN4Q9NQC3 CTAGE5-219ENST00000640607 4239 ntAPPRIS P5 TSL 1 (best) BASIC6.34□□□□□ -1.39
RTN4Q9NQC3 SPRR2D-203ENST00000368757 800 ntAPPRIS P1 TSL 3 BASIC6.34□□□□□ -1.39
RTN4Q9NQC3 TRAV1-2-201ENST00000390423 402 ntAPPRIS P1 BASIC6.34□□□□□ -1.39
RTN4Q9NQC3 AL512633.1-201ENST00000399931 655 ntBASIC6.34□□□□□ -1.39
RTN4Q9NQC3 RNA5SP201-201ENST00000410316 124 ntBASIC6.34□□□□□ -1.39
RTN4Q9NQC3 AC104333.2-201ENST00000422630 192 ntBASIC6.34□□□□□ -1.39
RTN4Q9NQC3 AL360007.1-201ENST00000426166 349 ntTSL 3 BASIC6.34□□□□□ -1.39
RTN4Q9NQC3 AC096639.1-201ENST00000456240 347 ntTSL 5 BASIC6.34□□□□□ -1.39
RTN4Q9NQC3 Metazoa_SRP.158-201ENST00000487171 294 ntBASIC6.34□□□□□ -1.39
RTN4Q9NQC3 HMGB3P17-201ENST00000504195 649 ntBASIC6.34□□□□□ -1.39
RTN4Q9NQC3 AC083973.1-205ENST00000518994 601 ntTSL 2 BASIC6.34□□□□□ -1.39
RTN4Q9NQC3 5S_rRNA.29-201ENST00000641250 107 ntBASIC6.34□□□□□ -1.39
RTN4Q9NQC3 CNTRL-201ENST00000238341 7431 ntAPPRIS P1 TSL 1 (best) BASIC6.34□□□□□ -1.39
RTN4Q9NQC3 BLM-208ENST00000560509 3966 ntTSL 1 (best) BASIC6.33□□□□□ -1.4
RTN4Q9NQC3 RNY1-201ENST00000364228 113 ntBASIC6.33□□□□□ -1.4
RTN4Q9NQC3 RGS4-201ENST00000367906 930 ntTSL 1 (best) BASIC6.33□□□□□ -1.4
RTN4Q9NQC3 Y_RNA.498-201ENST00000384460 102 ntBASIC6.33□□□□□ -1.4
RTN4Q9NQC3 Y_RNA.569-201ENST00000384749 103 ntBASIC6.33□□□□□ -1.4
RTN4Q9NQC3 IGLV7-43-201ENST00000390298 385 ntAPPRIS P1 BASIC6.33□□□□□ -1.4
RTN4Q9NQC3 PLCL2-AS1-201ENST00000414844 311 ntTSL 2 BASIC6.33□□□□□ -1.4
RTN4Q9NQC3 AL049712.1-201ENST00000418739 872 ntTSL 3 BASIC6.33□□□□□ -1.4
RTN4Q9NQC3 RPL12P49-201ENST00000441100 121 ntBASIC6.33□□□□□ -1.4
RTN4Q9NQC3 AC246785.3-201ENST00000455105 314 ntTSL 5 BASIC6.33□□□□□ -1.4
RTN4Q9NQC3 RPL23AP62-201ENST00000463396 453 ntBASIC6.33□□□□□ -1.4
RTN4Q9NQC3 AL121594.1-201ENST00000475906 575 ntBASIC6.33□□□□□ -1.4
RTN4Q9NQC3 RPS23P1-201ENST00000491662 432 ntBASIC6.33□□□□□ -1.4
RTN4Q9NQC3 SNRPCP11-201ENST00000492453 205 ntBASIC6.33□□□□□ -1.4
RTN4Q9NQC3 SCARNA24.2-201ENST00000516968 130 ntBASIC6.33□□□□□ -1.4
RTN4Q9NQC3 RNU6-182P-201ENST00000516970 105 ntBASIC6.33□□□□□ -1.4
RTN4Q9NQC3 AC026462.2-201ENST00000565771 286 ntTSL 2 BASIC6.33□□□□□ -1.4
RTN4Q9NQC3 MT1CP-201ENST00000567054 174 ntBASIC6.33□□□□□ -1.4
RTN4Q9NQC3 OR1E3-201ENST00000575608 948 ntBASIC6.33□□□□□ -1.4
RTN4Q9NQC3 AC131274.4-201ENST00000577879 398 ntTSL 3 BASIC6.33□□□□□ -1.4
RTN4Q9NQC3 MIR7853-201ENST00000584820 132 ntBASIC6.33□□□□□ -1.4
RTN4Q9NQC3 AC130469.1-201ENST00000597256 388 ntTSL 5 BASIC6.33□□□□□ -1.4
RTN4Q9NQC3 AL139099.4-201ENST00000614802 114 ntBASIC6.33□□□□□ -1.4
RTN4Q9NQC3 CACNB4-233ENST00000636773 4143 ntTSL 5 BASIC6.33□□□□□ -1.4
RTN4Q9NQC3 ATRX-202ENST00000395603 10218 ntAPPRIS ALT2 TSL 1 (best) BASIC6.33□□□□□ -1.4
RTN4Q9NQC3 AC016687.3-202ENST00000505018 2404 ntTSL 1 (best) BASIC6.33□□□□□ -1.4
RTN4Q9NQC3 MBNL1-224ENST00000545754 5147 ntTSL 5 BASIC6.32□□□□□ -1.4
RTN4Q9NQC3 UBR1-201ENST00000290650 7761 ntAPPRIS P1 TSL 1 (best) BASIC6.32□□□□□ -1.4
RTN4Q9NQC3 UGT2A1-203ENST00000503640 2595 ntAPPRIS P1 TSL 1 (best) BASIC6.32□□□□□ -1.4
RTN4Q9NQC3 Y_RNA.16-201ENST00000362421 102 ntBASIC6.32□□□□□ -1.4
RTN4Q9NQC3 RNU6-338P-201ENST00000383888 105 ntBASIC6.32□□□□□ -1.4
RTN4Q9NQC3 AL592291.1-201ENST00000403830 352 ntBASIC6.32□□□□□ -1.4
RTN4Q9NQC3 AC005154.1-208ENST00000440438 353 ntTSL 5 BASIC6.32□□□□□ -1.4
RTN4Q9NQC3 AC011752.1-201ENST00000451476 494 ntTSL 5 BASIC6.32□□□□□ -1.4
RTN4Q9NQC3 RNU6-625P-201ENST00000459412 107 ntBASIC6.32□□□□□ -1.4
RTN4Q9NQC3 AC112771.1-201ENST00000463581 102 ntBASIC6.32□□□□□ -1.4
RTN4Q9NQC3 AC008957.1-203ENST00000508745 589 ntTSL 3 BASIC6.32□□□□□ -1.4
RTN4Q9NQC3 RNA5SP112-201ENST00000515937 99 ntBASIC6.32□□□□□ -1.4
RTN4Q9NQC3 INO80-AS1-201ENST00000558967 312 ntTSL 5 BASIC6.32□□□□□ -1.4
RTN4Q9NQC3 AP2S1-210ENST00000601649 315 ntTSL 3 BASIC6.32□□□□□ -1.4
Retrieved 100 of 98,524 protein–RNA pairs in 99.4 ms